Detailed information    

insolico Bioinformatically predicted

Overview


Name   comGE   Type   Machinery gene
Locus tag   Q7637_RS08425 Genome accession   NZ_CP131665
Coordinates   1716350..1716649 (-) Length   99 a.a.
NCBI ID   WP_000844410.1    Uniprot ID   A0A7R6NZL1
Organism   Staphylococcus aureus strain 2010S01-051     
Function   dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 1711350..1721649
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q7637_RS08400 (Q7637_08390) gcvPA 1712562..1713908 (-) 1347 WP_000019691.1 aminomethyl-transferring glycine dehydrogenase subunit GcvPA -
  Q7637_RS08405 (Q7637_08395) gcvT 1713928..1715019 (-) 1092 WP_341956956.1 glycine cleavage system aminomethyltransferase GcvT -
  Q7637_RS08410 (Q7637_08400) - 1715178..1715702 (-) 525 WP_001015120.1 shikimate kinase -
  Q7637_RS08415 (Q7637_08405) - 1715692..1715838 (-) 147 WP_001792109.1 hypothetical protein -
  Q7637_RS08420 (Q7637_08410) comGF 1715935..1716432 (-) 498 WP_001788897.1 competence type IV pilus minor pilin ComGF Machinery gene
  Q7637_RS08425 (Q7637_08415) comGE 1716350..1716649 (-) 300 WP_000844410.1 hypothetical protein Machinery gene
  Q7637_RS08430 (Q7637_08420) comGD 1716636..1717082 (-) 447 WP_001788899.1 competence type IV pilus minor pilin ComGD Machinery gene
  Q7637_RS08435 (Q7637_08425) comGC 1717060..1717371 (-) 312 WP_000472256.1 competence type IV pilus major pilin ComGC Machinery gene
  Q7637_RS08440 (Q7637_08430) comGB 1717385..1718455 (-) 1071 WP_000776422.1 competence type IV pilus assembly protein ComGB Machinery gene
  Q7637_RS08445 (Q7637_08435) comGA 1718427..1719401 (-) 975 WP_341956958.1 competence type IV pilus ATPase ComGA Machinery gene
  Q7637_RS08450 (Q7637_08440) - 1719452..1720075 (-) 624 WP_001223008.1 MBL fold metallo-hydrolase -
  Q7637_RS08455 (Q7637_08445) - 1720072..1720401 (-) 330 WP_001018871.1 MTH1187 family thiamine-binding protein -
  Q7637_RS08460 (Q7637_08450) - 1720401..1721387 (-) 987 WP_000161311.1 ROK family glucokinase -
  Q7637_RS08465 (Q7637_08455) - 1721384..1721587 (-) 204 WP_000087561.1 YqgQ family protein -

Sequence


Protein


Download         Length: 99 a.a.        Molecular weight: 11079.18 Da        Isoelectric Point: 9.9215

>NTDB_id=863524 Q7637_RS08425 WP_000844410.1 1716350..1716649(-) (comGE) [Staphylococcus aureus strain 2010S01-051]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQSIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY

Nucleotide


Download         Length: 300 bp        

>NTDB_id=863524 Q7637_RS08425 WP_000844410.1 1716350..1716649(-) (comGE) [Staphylococcus aureus strain 2010S01-051]
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAATCAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAATATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA

Domains



No domain identified.



Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A7R6NZL1

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comGE Staphylococcus aureus N315

100

100

1

  comGE Staphylococcus aureus MW2

85.965

100

0.99