Detailed information
Overview
| Name | pilJ | Type | Machinery gene |
| Locus tag | Q7647_RS02675 | Genome accession | NZ_CP131636 |
| Coordinates | 516256..517215 (+) | Length | 319 a.a. |
| NCBI ID | WP_050169726.1 | Uniprot ID | - |
| Organism | Neisseria gonorrhoeae strain 2016E02-233 | ||
| Function | type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 511256..522215
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| Q7647_RS02650 (Q7647_02650) | - | 511754..512263 (+) | 510 | WP_003687909.1 | isoprenylcysteine carboxyl methyltransferase family protein | - |
| Q7647_RS02655 (Q7647_02655) | - | 512493..513074 (-) | 582 | WP_003690895.1 | superoxide dismutase | - |
| Q7647_RS02660 (Q7647_02660) | dnaB | 513237..514643 (+) | 1407 | WP_071200491.1 | replicative DNA helicase | - |
| Q7647_RS02665 (Q7647_02665) | pilH | 514951..515613 (+) | 663 | WP_106167105.1 | Tfp pilus assembly protein FimT/FimU | Machinery gene |
| Q7647_RS02670 (Q7647_02670) | pilI | 515645..516259 (+) | 615 | WP_012503479.1 | type IV pilus modification protein PilV | Machinery gene |
| Q7647_RS02675 (Q7647_02675) | pilJ | 516256..517215 (+) | 960 | WP_050169726.1 | PilW family protein | Machinery gene |
| Q7647_RS02680 (Q7647_02680) | pilK | 517194..517805 (+) | 612 | WP_012503481.1 | pilus assembly protein | Machinery gene |
| Q7647_RS02685 (Q7647_02685) | pilL | 517807..518280 (+) | 474 | WP_012503482.1 | PilX family type IV pilin | Machinery gene |
| Q7647_RS02690 (Q7647_02690) | - | 518350..518658 (-) | 309 | WP_003706588.1 | AzlD family protein | - |
| Q7647_RS02695 (Q7647_02695) | - | 518655..519366 (-) | 712 | Protein_521 | AzlC family ABC transporter permease | - |
| Q7647_RS02700 (Q7647_02700) | dut | 519532..519984 (+) | 453 | WP_003701071.1 | dUTP diphosphatase | - |
| Q7647_RS02705 (Q7647_02705) | dapC | 520056..521243 (+) | 1188 | WP_003701073.1 | succinyldiaminopimelate transaminase | - |
| Q7647_RS02710 (Q7647_02710) | yaaA | 521399..522178 (+) | 780 | WP_003687925.1 | peroxide stress protein YaaA | - |
Sequence
Protein
Download Length: 319 a.a. Molecular weight: 35245.19 Da Isoelectric Point: 9.3781
>NTDB_id=863073 Q7647_RS02675 WP_050169726.1 516256..517215(+) (pilJ) [Neisseria gonorrhoeae strain 2016E02-233]
MKRKMLNVPKGGYDGMKGFTIVEFLVAGLLSVIVLIAVVSSYFTSRKLNDAANERLAIQQDLRNAATLIVRDARMAGSFG
CFNMSEHTEKDVVSDVAQKNRLFSLKMNSTNKVISNGTDNKLIPIAESLNIRYQGFTHRPNALIFQYGIDDVNASADTTV
VSSCAAISKPDKQILNLEDVKKELKIVGQGKEQNGNIARQRHVVNAYAVGRFGNEEGLFRFQLNEKGEWGNPQLLAKKIK
RMRVRYIYVSGCPEDEDAGKEEQFKYTDKFDSSVTPAGVEVLLDSGSDAKIAASSDNIIYAYRINATIRGGNVCANRTL
MKRKMLNVPKGGYDGMKGFTIVEFLVAGLLSVIVLIAVVSSYFTSRKLNDAANERLAIQQDLRNAATLIVRDARMAGSFG
CFNMSEHTEKDVVSDVAQKNRLFSLKMNSTNKVISNGTDNKLIPIAESLNIRYQGFTHRPNALIFQYGIDDVNASADTTV
VSSCAAISKPDKQILNLEDVKKELKIVGQGKEQNGNIARQRHVVNAYAVGRFGNEEGLFRFQLNEKGEWGNPQLLAKKIK
RMRVRYIYVSGCPEDEDAGKEEQFKYTDKFDSSVTPAGVEVLLDSGSDAKIAASSDNIIYAYRINATIRGGNVCANRTL
Nucleotide
Download Length: 960 bp
>NTDB_id=863073 Q7647_RS02675 WP_050169726.1 516256..517215(+) (pilJ) [Neisseria gonorrhoeae strain 2016E02-233]
ATGAAACGTAAAATGCTAAACGTACCAAAGGGCGGTTATGATGGTATGAAGGGTTTTACCATTGTTGAATTTCTGGTTGC
GGGCCTGCTCAGTGTGATTGTCCTGATAGCGGTCGTATCGAGTTACTTTACATCCCGGAAATTAAATGATGCGGCAAACG
AGCGTCTTGCCATTCAACAGGATTTGCGGAATGCGGCAACATTGATTGTCCGCGATGCAAGAATGGCGGGGAGCTTCGGT
TGTTTCAATATGTCTGAGCATACCGAAAAGGATGTTGTTTCCGATGTGGCGCAAAAAAACCGTCTTTTTTCCTTAAAAAT
GAACAGTACAAATAAAGTTATCTCCAACGGTACAGATAATAAACTTATCCCCATAGCGGAATCTTTAAATATCAGATATC
AGGGTTTTACCCATCGCCCTAACGCATTGATTTTTCAATACGGAATCGATGATGTTAATGCAAGCGCCGATACTACCGTC
GTCAGCAGCTGTGCCGCAATATCGAAACCGGACAAGCAAATCCTTAATTTAGAAGATGTAAAAAAAGAATTGAAGATTGT
GGGTCAGGGTAAGGAGCAAAATGGCAATATAGCGCGTCAAAGGCATGTGGTCAATGCCTATGCGGTCGGCAGGTTTGGCA
ATGAGGAAGGTTTGTTCCGCTTCCAATTGAATGAAAAGGGCGAGTGGGGTAATCCTCAGTTGCTCGCGAAAAAGATTAAA
CGTATGAGAGTGCGGTATATCTATGTTTCCGGTTGTCCTGAAGATGAAGATGCCGGCAAAGAGGAACAATTCAAATATAC
GGATAAATTCGACAGCTCTGTTACGCCTGCCGGGGTGGAGGTTTTATTGGATAGCGGTAGTGATGCCAAGATTGCCGCTT
CTTCAGATAATATTATTTATGCTTACCGTATCAATGCGACAATACGCGGGGGAAATGTATGCGCAAACAGAACACTTTGA
ATGAAACGTAAAATGCTAAACGTACCAAAGGGCGGTTATGATGGTATGAAGGGTTTTACCATTGTTGAATTTCTGGTTGC
GGGCCTGCTCAGTGTGATTGTCCTGATAGCGGTCGTATCGAGTTACTTTACATCCCGGAAATTAAATGATGCGGCAAACG
AGCGTCTTGCCATTCAACAGGATTTGCGGAATGCGGCAACATTGATTGTCCGCGATGCAAGAATGGCGGGGAGCTTCGGT
TGTTTCAATATGTCTGAGCATACCGAAAAGGATGTTGTTTCCGATGTGGCGCAAAAAAACCGTCTTTTTTCCTTAAAAAT
GAACAGTACAAATAAAGTTATCTCCAACGGTACAGATAATAAACTTATCCCCATAGCGGAATCTTTAAATATCAGATATC
AGGGTTTTACCCATCGCCCTAACGCATTGATTTTTCAATACGGAATCGATGATGTTAATGCAAGCGCCGATACTACCGTC
GTCAGCAGCTGTGCCGCAATATCGAAACCGGACAAGCAAATCCTTAATTTAGAAGATGTAAAAAAAGAATTGAAGATTGT
GGGTCAGGGTAAGGAGCAAAATGGCAATATAGCGCGTCAAAGGCATGTGGTCAATGCCTATGCGGTCGGCAGGTTTGGCA
ATGAGGAAGGTTTGTTCCGCTTCCAATTGAATGAAAAGGGCGAGTGGGGTAATCCTCAGTTGCTCGCGAAAAAGATTAAA
CGTATGAGAGTGCGGTATATCTATGTTTCCGGTTGTCCTGAAGATGAAGATGCCGGCAAAGAGGAACAATTCAAATATAC
GGATAAATTCGACAGCTCTGTTACGCCTGCCGGGGTGGAGGTTTTATTGGATAGCGGTAGTGATGCCAAGATTGCCGCTT
CTTCAGATAATATTATTTATGCTTACCGTATCAATGCGACAATACGCGGGGGAAATGTATGCGCAAACAGAACACTTTGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilJ | Neisseria gonorrhoeae MS11 |
86.52 |
100 |
0.865 |