Detailed information    

insolico Bioinformatically predicted

Overview


Name   recG   Type   Machinery gene
Locus tag   WBG99_RS09365 Genome accession   NZ_CP147520
Coordinates   2325813..2328020 (-) Length   735 a.a.
NCBI ID   WP_338900273.1    Uniprot ID   -
Organism   Streptomyces sp. TG1A-60     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 2320813..2333020
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  - recG 2325813..2328020 (-) 2208 - - Machinery gene

Sequence


Protein


Download         Length: 735 a.a.        Molecular weight: 79786.33 Da        Isoelectric Point: 6.2771

>NTDB_id=859702 WBG99_RS09365 WP_338900273.1 2325813..2328020(-) (recG) [Streptomyces sp. TG1A-60]
MDLVPALEEPLKNTLGAATAKVMAEHLGLHTVGDLLHHYPRRYEERGQLTHLTDLPMDEHVTVVAQVADARLHTFASAKA
PRGKGQRLEVTITDGSGRLQLVFFGNGVHKPHKELLPGTRALFAGKVSVFNRRLQLAHPAYELLRGDDVTETVDTWAGAL
IPLYPATAKLESWKIAKAVQTVLPSAQEAADPLPDALRAGRGLVPLPEALLKIHRPHTKADIEGARDRLKWDEAFVLQVA
LARRRYADAQLPAVARRPAPYGLLTAFDACLPFTLTDGQRKVSKEIFDDLATEHPMHRLLQGEVGSGKTMVALRAMLAVV
DAGGQAAMLAPTEVLAQQHHRSVTEMMGELAEGGLLGGAEHATKVVLLTGSMGAAARRQALLELVTGEAGIVIGTHALIE
DKVQFHDLGLVVVDEQHRFGVEQRDALRGKGKQPPHLLVMTATPIPRTVAMTVFGDLETSVLDQLPAGRSPIASHVVPAA
DKPHFLARTWERVREEVDNGHQAYVVCPRIGDEEDDPKKSGSKSPEDEAEKRPPLAVLEVADQLAKGPLQGLAVEVLHGR
MHPDDKDAVMRRFAAGETHVLVATTVIEVGVNVPNATAMVIMDADRFGVSQLHQLRGRVGRGSAPGLCLLVTDMPEASPA
RQRLNAVASTLDGFELSRIDLEQRREGDVLGQAQSGARTSLRMLTVIDDEEIIAEAREEAVRVVADDPDLKRLPGLRTAL
DALLDEEREQYLDKG

Nucleotide


Download         Length: 2208 bp        

>NTDB_id=859702 WBG99_RS09365 WP_338900273.1 2325813..2328020(-) (recG) [Streptomyces sp. TG1A-60]
ATGGATCTCGTGCCCGCGCTCGAAGAACCGCTCAAGAACACGCTCGGCGCCGCCACCGCCAAGGTGATGGCCGAGCACCT
CGGCCTGCACACCGTCGGGGACCTGCTGCACCACTATCCCCGCCGGTACGAGGAGCGTGGCCAGCTCACCCACCTCACCG
ACCTGCCCATGGACGAGCACGTCACGGTGGTCGCCCAGGTCGCCGACGCCCGCCTGCACACCTTCGCCTCCGCCAAGGCC
CCCCGGGGCAAGGGCCAGCGCCTGGAAGTGACCATCACGGACGGCAGCGGGCGCCTCCAGCTCGTCTTCTTCGGCAACGG
CGTGCACAAACCCCACAAGGAGCTCCTCCCTGGCACCCGCGCCCTCTTCGCCGGCAAGGTCTCCGTCTTCAACCGCCGCC
TCCAACTGGCCCACCCGGCCTACGAACTGCTCCGCGGCGACGATGTCACGGAGACCGTCGACACCTGGGCCGGCGCCCTC
ATCCCCCTCTATCCCGCCACCGCCAAGCTGGAGTCCTGGAAGATCGCCAAAGCCGTCCAGACGGTCCTCCCGAGCGCCCA
GGAGGCCGCCGACCCCCTGCCCGACGCCCTGCGCGCGGGCCGCGGCCTCGTCCCGCTCCCCGAAGCCCTCCTGAAGATCC
ACCGCCCCCATACCAAAGCGGACATCGAGGGCGCCCGCGACCGTCTCAAGTGGGACGAGGCCTTCGTCCTCCAGGTCGCC
CTCGCCCGCCGCCGGTACGCCGACGCGCAGCTCCCCGCCGTAGCCCGCAGACCCGCCCCCTACGGCCTCCTCACCGCCTT
CGACGCCTGCCTCCCCTTCACCCTCACCGACGGCCAGCGGAAGGTCTCCAAGGAGATCTTCGACGACCTGGCCACCGAGC
ACCCGATGCACCGGCTGCTCCAGGGGGAAGTGGGTTCCGGCAAGACGATGGTGGCCCTGCGGGCCATGCTCGCCGTGGTC
GACGCCGGCGGCCAGGCGGCCATGCTCGCGCCCACCGAGGTGCTCGCCCAGCAGCACCACCGGTCGGTCACCGAGATGAT
GGGCGAGCTGGCCGAGGGCGGGCTGCTGGGCGGGGCCGAGCACGCCACCAAAGTGGTGCTGCTCACCGGCTCGATGGGCG
CCGCGGCCCGCCGCCAGGCCCTGCTCGAACTGGTCACCGGCGAGGCGGGCATCGTCATCGGCACCCACGCGCTGATCGAG
GACAAGGTGCAGTTCCACGACCTGGGTCTGGTCGTCGTGGACGAACAGCACCGCTTCGGCGTCGAACAGCGCGACGCCCT
GCGCGGCAAGGGCAAGCAGCCGCCCCACCTCCTCGTCATGACGGCCACCCCCATCCCCCGCACGGTGGCCATGACCGTCT
TCGGTGACCTGGAGACCTCCGTCCTCGACCAACTCCCCGCCGGCCGCTCACCCATCGCCAGCCATGTCGTGCCGGCAGCC
GACAAGCCCCACTTCCTCGCCCGCACCTGGGAGCGCGTCCGGGAGGAGGTCGACAACGGACATCAGGCGTACGTCGTCTG
CCCCCGCATCGGAGACGAGGAGGACGACCCGAAGAAGTCCGGCAGCAAGTCCCCCGAGGACGAGGCCGAGAAGCGCCCGC
CCCTCGCCGTCCTGGAGGTCGCCGACCAACTGGCCAAGGGCCCCCTTCAAGGTCTCGCGGTCGAGGTCCTGCACGGCCGT
ATGCACCCCGACGACAAGGACGCGGTCATGCGCCGCTTCGCCGCCGGCGAGACCCACGTCCTGGTCGCGACGACGGTCAT
CGAGGTCGGAGTGAACGTCCCGAACGCCACGGCCATGGTGATCATGGACGCCGACCGCTTCGGCGTCTCCCAGCTCCACC
AGCTCCGAGGCCGCGTCGGCCGGGGCTCCGCTCCCGGCCTCTGCCTCCTCGTCACCGACATGCCCGAGGCGAGTCCGGCC
CGTCAGCGCCTCAACGCCGTCGCCTCGACCCTCGACGGCTTCGAGCTCTCCCGCATCGACCTGGAACAACGCCGCGAGGG
CGATGTCCTGGGCCAGGCCCAGTCCGGCGCCCGCACCAGCCTCCGCATGCTCACCGTCATCGACGACGAGGAGATCATCG
CGGAGGCGAGAGAAGAGGCCGTCCGGGTCGTCGCCGACGACCCGGACCTGAAGCGCCTGCCGGGCCTCAGGACGGCCCTG
GACGCGCTGCTGGACGAGGAGAGGGAGCAGTACCTGGACAAGGGCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recG Neisseria meningitidis strain C311

38.075

94.694

0.361