Detailed information NTG0856355

Bioinformatically predicted

Overview

• Name: recR
• Type: Machinery gene
• Locus tag: Q0M94_RS10470
• Genome accession: NZ_CP129906
• Coordinates: 2045593..2046273 (+)
• Length: 226 a.a.
• NCBI ID: WP_407541505.1
• Uniprot ID: -
• Organism: Deinococcus radiomollis strain PO-04-20-132
• Function: promote later steps in plasmid transformation (predicted from homology) Homologous recombination

Genomic Context

Location: 2040593..2051273

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Q0M94_RS10430 (Q0M94_10405)	-	2041027..2041785 (-)	759	WP_407538591.1	class I SAM-dependent methyltransferase	-
Q0M94_RS10435 (Q0M94_10410)	-	2042004..2042732 (+)	729	WP_407538592.1	phage holin family protein	-
Q0M94_RS10440 (Q0M94_10415)	-	2042732..2043169 (+)	438	WP_407538593.1	hypothetical protein	-
Q0M94_RS10445 (Q0M94_10420)	-	2043241..2043696 (+)	456	WP_407538594.1	AAA family ATPase	-
Q0M94_RS10450 (Q0M94_10425)	-	2043748..2044392 (+)	645	WP_407538595.1	peroxidase-related enzyme	-
Q0M94_RS10455 (Q0M94_10430)	-	2044389..2044682 (+)	294	WP_407538596.1	phosphoribosyl-ATP pyrophosphohydrolase	-
Q0M94_RS10460 (Q0M94_10435)	-	2044679..2045224 (+)	546	WP_407538597.1	GNAT family N-acetyltransferase	-
Q0M94_RS10465 (Q0M94_10440)	-	2045300..2045596 (+)	297	WP_407538598.1	YbaB/EbfC family nucleoid-associated protein	-
Q0M94_RS10470 (Q0M94_10445)	recR	2045593..2046273 (+)	681	WP_407541505.1	recombination mediator RecR	Machinery gene
Q0M94_RS10475 (Q0M94_10450)	-	2046380..2046730 (+)	351	WP_407538599.1	roadblock/LC7 domain-containing protein	-
Q0M94_RS10480 (Q0M94_10455)	-	2046792..2047154 (+)	363	WP_407538600.1	roadblock/LC7 domain-containing protein	-
Q0M94_RS10485 (Q0M94_10460)	-	2047154..2047468 (+)	315	WP_407538601.1	roadblock/LC7 domain-containing protein	-
Q0M94_RS10490 (Q0M94_10465)	-	2047559..2048146 (+)	588	WP_407538602.1	lysophospholipid acyltransferase family protein	-
Q0M94_RS10495 (Q0M94_10470)	rpmE	2048257..2048487 (+)	231	WP_407541506.1	50S ribosomal protein L31	-
Q0M94_RS10500 (Q0M94_10475)	-	2048641..2049252 (+)	612	WP_407538603.1	thymidine kinase	-
Q0M94_RS10505 (Q0M94_10480)	-	2049346..2049738 (+)	393	WP_407538604.1	hypothetical protein	-

Sequence

Protein

• Length: 226 a.a.
• Molecular weight: 24179.61 Da
• Isoelectric Point: 4.8022

>NTDB_id=856355 Q0M94_RS10470 WP_407541505.1 2045593..2046273(+) (recR) [Deinococcus radiomollis strain PO-04-20-132]
MKYPPSLVALIRELSRLPGIGPKSAQRLAFHLFEQPREDIERLSGALLDAKRDLHTCPVCFNITDADRCDVCSDPGRDQA
LICVVEEPGDVIAIERSGEYQGLYHVLHGVISPMNGVGPDKLYIKALLPRLSTAQEVILATGTTVEGEATALYLQRLLEP
LGVGLSRIAYGLPVGGALEYADEVTLGRALSGRQQLHTAQPAPSRPAPATPATPNDDPEDGVTALA

Nucleotide

• Length: 681 bp

>NTDB_id=856355 Q0M94_RS10470 WP_407541505.1 2045593..2046273(+) (recR) [Deinococcus radiomollis strain PO-04-20-132]
CTGAAGTACCCCCCAAGTCTGGTGGCCCTGATCCGGGAACTGTCGCGGTTGCCGGGCATCGGCCCGAAGAGCGCCCAGCG
GCTGGCCTTCCACCTCTTCGAGCAGCCGCGTGAAGACATCGAGCGGCTTTCCGGCGCGCTGCTGGATGCCAAGCGCGACC
TGCACACCTGCCCGGTGTGTTTCAACATCACCGACGCCGACCGCTGCGACGTGTGCAGCGACCCTGGCCGCGACCAGGCA
TTGATCTGCGTGGTCGAGGAGCCCGGCGACGTGATCGCCATCGAGCGCAGCGGCGAGTACCAGGGGCTGTACCACGTGCT
GCACGGCGTGATTTCGCCCATGAACGGCGTCGGACCCGACAAGCTGTACATCAAGGCGCTGCTGCCGCGCCTGAGCACCG
CGCAGGAGGTCATTCTGGCGACCGGCACCACCGTCGAGGGTGAGGCCACCGCACTGTACCTTCAGCGCCTGCTGGAGCCG
CTGGGCGTTGGCCTGTCGCGCATCGCCTACGGTCTGCCGGTGGGCGGCGCGCTGGAATACGCCGACGAGGTGACCCTGGG
CCGCGCCCTGTCGGGTCGTCAGCAACTGCACACCGCGCAGCCCGCGCCTTCCCGGCCCGCACCCGCAACCCCCGCAACCC
CGAACGACGACCCGGAAGACGGCGTGACGGCTCTGGCCTGA

Domains

Predicted by InterproScan.

• Toprim domain (Toprim_4) (82-169)

• RecR protein (RecR_ZnF) (40-78)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recR	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	81.643	91.593	0.748