Detailed information NTG0854552

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: V2W30_RS06695
• Genome accession: NZ_CP146022
• Coordinates: 1415489..1416847 (-)
• Length: 452 a.a.
• NCBI ID: WP_338694436.1
• Uniprot ID: A0ACD5A772
• Organism: Streptomyces sp. Q6
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1410489..1421847

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V2W30_RS06675 (V2W30_06675)	-	1410750..1411205 (-)	456	WP_338694429.1	DUF948 domain-containing protein	-
V2W30_RS06680 (V2W30_06680)	-	1411392..1413608 (+)	2217	WP_338694431.1	AAA family ATPase	-
V2W30_RS06685 (V2W30_06685)	rpsD	1413663..1414277 (-)	615	WP_018534860.1	30S ribosomal protein S4	-
V2W30_RS06690 (V2W30_06690)	-	1414614..1415333 (-)	720	WP_338694434.1	HNH endonuclease family protein	-
V2W30_RS06695 (V2W30_06695)	rarA	1415489..1416847 (-)	1359	WP_338694436.1	replication-associated recombination protein A	Machinery gene
V2W30_RS06700 (V2W30_06700)	-	1416893..1417546 (-)	654	WP_338694438.1	vitamin K epoxide reductase family protein	-
V2W30_RS06705 (V2W30_06705)	hisS	1417713..1418975 (-)	1263	WP_338694440.1	histidine--tRNA ligase	-
V2W30_RS06710 (V2W30_06710)	-	1418989..1419702 (-)	714	WP_338694442.1	MBL fold metallo-hydrolase	-
V2W30_RS06715 (V2W30_06715)	-	1419851..1420648 (+)	798	WP_338694444.1	peptidylprolyl isomerase	-

Sequence

Protein

• Length: 452 a.a.
• Molecular weight: 47911.20 Da
• Isoelectric Point: 5.6527

>NTDB_id=854552 V2W30_RS06695 WP_338694436.1 1415489..1416847(-) (rarA) [Streptomyces sp. Q6]
MEPDLFTAAAEERQEKDPSASPLAVRMRPRTLDEVVGQQHLLKPGAPLRRLVGEGASGPAGVSSVILWGPPGIGKTTLAY
VVSKATNKRFVELSAITAGVKEVRAVIEGARRALGGHGKDTVLFLDEIHRFSKAQQDSLLPAVENRWVTLIAATTENPYF
SVISPLLSRSLLLTLEPLTDDDLRSLLARALTEERGLDGALGLDTDAEEHLLRVAGGDARRALTALEAAAGAAFDKGEES
ISLESVEESVNRAAVTYDRDGDQHYDVASALIKSIRGSDVDAALHYLARMIEAGEDPRFIARRLMISASEDIGLADPTAL
PTAVAAAQAVAMIGFPEAALTLSHATIALALAPKSNAATTAIGAAMEDVRKGLAGAVPAHLRDGHYKGAAKLGHAQGYVY
PHDVPGGIAAQQYAPDAIAGRRYYEPTRYGAEARYADVVERVRERLRGDGGA

Nucleotide

• Length: 1359 bp

>NTDB_id=854552 V2W30_RS06695 WP_338694436.1 1415489..1416847(-) (rarA) [Streptomyces sp. Q6]
GTGGAACCCGATCTGTTCACCGCCGCAGCCGAAGAACGCCAGGAGAAGGACCCGTCCGCGAGCCCCCTGGCCGTACGGAT
GCGCCCCCGCACCCTCGACGAGGTGGTGGGCCAGCAGCACCTCCTGAAGCCGGGAGCGCCGCTGCGCCGCCTCGTCGGCG
AGGGCGCCTCCGGCCCGGCGGGTGTCTCGTCGGTGATCCTGTGGGGCCCGCCCGGCATCGGAAAGACGACTCTCGCCTAC
GTGGTCTCCAAGGCCACGAACAAGCGGTTCGTGGAGCTGTCCGCGATCACCGCGGGCGTCAAGGAAGTACGCGCCGTCAT
CGAGGGCGCCCGCCGCGCGCTTGGCGGTCACGGCAAGGACACCGTCCTCTTCCTCGACGAGATCCACCGCTTCAGCAAGG
CCCAGCAGGACTCCCTGCTGCCCGCGGTGGAGAACCGCTGGGTGACGCTGATCGCGGCGACGACGGAGAACCCGTACTTC
TCGGTGATCTCTCCGCTGCTGTCCCGCTCCCTGCTCCTCACCCTCGAACCGCTCACGGACGACGACCTGCGGAGCCTGCT
CGCGCGGGCGCTCACCGAGGAGCGCGGCCTGGACGGCGCGCTGGGGCTCGACACGGACGCCGAGGAGCACCTGCTGCGGG
TGGCCGGCGGCGACGCCCGCCGGGCCCTCACCGCCCTGGAGGCGGCGGCCGGAGCGGCCTTCGACAAGGGCGAGGAGTCC
ATCAGCCTCGAAAGCGTCGAGGAGTCGGTCAACCGCGCGGCGGTCACGTACGACCGTGACGGCGACCAGCACTACGACGT
GGCGAGCGCCCTCATCAAGTCCATCCGGGGCTCGGACGTCGACGCGGCCCTGCACTACCTGGCCCGCATGATCGAGGCCG
GTGAGGACCCGCGCTTCATCGCGCGCCGACTGATGATCTCCGCGAGCGAGGACATCGGCCTCGCCGACCCCACGGCCCTG
CCCACGGCGGTCGCCGCCGCCCAGGCCGTCGCGATGATCGGCTTCCCGGAGGCCGCGCTGACCCTCAGCCACGCGACGAT
CGCCCTCGCCCTGGCCCCGAAGTCGAACGCGGCGACGACGGCGATCGGCGCCGCCATGGAGGACGTCCGCAAGGGCCTCG
CCGGTGCGGTCCCGGCCCATCTGCGCGACGGCCACTACAAGGGCGCCGCCAAGCTCGGCCACGCGCAGGGGTACGTGTAC
CCGCACGACGTCCCCGGTGGCATCGCGGCGCAGCAGTACGCGCCGGACGCGATCGCCGGGCGCCGCTACTACGAGCCGAC
GCGGTACGGGGCGGAGGCGCGGTACGCGGATGTGGTGGAGCGGGTCCGCGAGCGGCTGCGCGGCGACGGGGGCGCGTGA

Domains

Predicted by InterProScan.

• ATPase family associated with various cellular activities (AAA) (AAA) (65-169)

• MgsA AAA+ ATPase C terminal (MgsA_C) (277-442)

• AAA C-terminal domain (AAA_assoc_2) (200-276)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	44.186	95.133	0.42