Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   V6U69_RS04210 Genome accession   NZ_CP145867
Coordinates   935599..937347 (+) Length   582 a.a.
NCBI ID   WP_410534249.1    Uniprot ID   -
Organism   Streptococcus salivarius strain KSS10     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 930599..942347
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V6U69_RS04190 (V6U69_04190) glyA 930992..932242 (+) 1251 WP_073689820.1 serine hydroxymethyltransferase -
  V6U69_RS04195 (V6U69_04195) - 932248..933225 (+) 978 WP_073689821.1 nucleoid-associated protein -
  V6U69_RS04200 (V6U69_04200) - 933227..933838 (+) 612 WP_049545439.1 lysozyme family protein -
  V6U69_RS04205 (V6U69_04205) - 933870..935609 (+) 1740 WP_410534247.1 ABC transporter ATP-binding protein -
  V6U69_RS04210 (V6U69_04210) rcrQ 935599..937347 (+) 1749 WP_410534249.1 ABC transporter ATP-binding protein Regulator
  V6U69_RS04215 (V6U69_04215) - 937525..937656 (+) 132 WP_002885174.1 teichoic acid D-Ala incorporation-associated protein DltX -
  V6U69_RS04220 (V6U69_04220) dltA 937665..939215 (+) 1551 WP_410534251.1 D-alanine--poly(phosphoribitol) ligase subunit DltA -
  V6U69_RS04225 (V6U69_04225) dltB 939212..940459 (+) 1248 WP_045768621.1 D-alanyl-lipoteichoic acid biosynthesis protein DltB -
  V6U69_RS04230 (V6U69_04230) dltC 940477..940716 (+) 240 WP_002891149.1 D-alanine--poly(phosphoribitol) ligase subunit DltC -
  V6U69_RS04235 (V6U69_04235) dltD 940709..941977 (+) 1269 WP_410534252.1 D-alanyl-lipoteichoic acid biosynthesis protein DltD -

Sequence

Protein


Download         Length: 582 a.a.        Molecular weight: 65420.86 Da        Isoelectric Point: 7.0651

>NTDB_id=853957 V6U69_RS04210 WP_410534249.1 935599..937347(+) (rcrQ) [Streptococcus salivarius strain KSS10]
MKARNNKSTLKRLSRDILSQRYLFALATVGTIIQVALTVYLPILIGDAVDAVLKMNAVLLMSRLIWQMLVVIIANSAIQW
LNPLIYNRLIYSYSESLRERVMVKIHAMPLSYLDRQGTGDMVSRVTTDSDQLNNGLLMVFNQFFVGLLTIFVIIITMARL
DWFMMLLVLVMTPLSMLVARFIAKKSYQLYRNQTKWRGMQTQLIEESLTQEALVQSLNAQDQMVRSFKDVNGKYADYSQG
AIFYSSAVNPATRFVNSLIYALIAGVGAYRIMSGGAFTVGQLTTFLNYVTQYTKPFNDISSVLSELQSALACADRLYMIL
DEEEITETGKVVLEEADVQGRFQFDHVQFGYLPNKPLIKDLSIDIPAASTVAIVGPTGAGKSTLINLLMRFYDLDKGNIL
LDGRPITDYTRESLRKQIGMVLQETWLEVGTIHDNIAYSNPEASREEVIAAAKAANADFFIQQLPQGYDTYLNDAGQSLS
QGQRQLLTIARIFVNVPKILILDEATSSIDTRTELLIQEAFAKLMKGRTSFIIAHRLSTIENADLILVMNNGDIVEHGTH
EQLMQAKGMYYRMQTAQKTQNS

Nucleotide


Download         Length: 1749 bp        

>NTDB_id=853957 V6U69_RS04210 WP_410534249.1 935599..937347(+) (rcrQ) [Streptococcus salivarius strain KSS10]
ATGAAGGCTAGAAATAACAAATCAACGCTTAAACGTTTAAGTAGAGATATCTTAAGTCAGCGTTACCTCTTTGCCTTAGC
AACTGTTGGGACCATTATTCAAGTTGCCTTAACGGTTTACTTACCTATCTTAATTGGTGATGCAGTTGATGCTGTTCTTA
AGATGAATGCCGTTCTTTTGATGTCACGTTTAATATGGCAGATGCTTGTAGTTATCATAGCTAATAGTGCGATTCAGTGG
CTAAATCCTTTAATTTATAACCGTTTGATTTATTCTTATAGTGAAAGTTTACGTGAGAGAGTCATGGTGAAAATTCATGC
CATGCCTCTCAGTTACCTTGACCGTCAAGGAACTGGAGATATGGTTAGCCGTGTGACTACAGATAGTGACCAATTAAATA
ACGGACTTCTCATGGTCTTTAACCAATTTTTCGTCGGGCTTTTGACCATATTTGTTATTATCATTACCATGGCTCGTTTG
GACTGGTTCATGATGCTCTTAGTTCTAGTGATGACACCCCTGTCAATGCTTGTGGCACGTTTTATCGCCAAGAAGAGCTA
TCAACTCTATCGCAATCAAACCAAATGGCGAGGCATGCAGACTCAGTTGATTGAGGAAAGTTTGACTCAAGAAGCCTTAG
TACAGAGTTTAAATGCTCAAGACCAGATGGTTAGGAGTTTTAAAGACGTCAATGGTAAGTATGCTGATTATTCACAGGGA
GCTATCTTTTATTCGTCAGCGGTTAACCCAGCTACACGCTTTGTTAATAGTCTGATTTATGCTCTCATTGCAGGTGTTGG
AGCCTATCGTATCATGTCAGGTGGCGCATTTACAGTGGGACAATTGACTACCTTCCTAAATTATGTGACTCAGTATACGA
AACCTTTTAATGATATCTCATCTGTTCTATCTGAACTTCAAAGTGCTTTGGCCTGTGCTGATCGCCTTTATATGATATTG
GATGAAGAGGAAATAACAGAAACAGGTAAGGTGGTCTTGGAAGAAGCAGATGTGCAGGGACGTTTTCAATTTGACCATGT
CCAATTTGGTTATTTGCCTAATAAACCTCTTATCAAGGATTTGAGCATTGATATCCCTGCCGCAAGTACTGTTGCCATTG
TTGGTCCAACAGGAGCGGGAAAATCTACCTTGATTAACCTGCTCATGCGTTTCTATGATTTGGACAAGGGGAACATTCTA
CTGGACGGTAGACCTATTACAGATTATACCCGTGAGAGTCTTCGGAAACAGATTGGGATGGTTTTGCAGGAAACTTGGCT
TGAGGTCGGCACTATTCATGATAATATTGCCTATAGTAATCCAGAAGCCAGTCGTGAAGAAGTCATAGCAGCGGCCAAGG
CTGCCAATGCAGATTTCTTTATTCAGCAGTTGCCTCAAGGTTATGACACCTACTTGAATGATGCGGGACAATCCCTTTCT
CAGGGACAACGTCAGCTTTTGACCATTGCTCGCATATTTGTCAATGTGCCTAAAATCTTAATCTTGGATGAAGCCACTTC
TAGCATCGATACCCGTACAGAGCTCCTCATTCAAGAGGCCTTCGCTAAATTAATGAAGGGTCGAACTAGTTTCATCATTG
CCCATCGATTGTCTACCATCGAAAATGCGGACCTTATTTTGGTCATGAATAATGGGGATATCGTTGAACACGGAACCCAT
GAACAACTGATGCAAGCTAAGGGAATGTACTATCGTATGCAGACGGCCCAAAAGACACAAAATAGTTAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(359-507)

ABC transporter transmembrane region (ABC_membrane)

(25-295)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

38.567

100

0.388