Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   V6U69_RS03110 Genome accession   NZ_CP145867
Coordinates   604037..605905 (+) Length   622 a.a.
NCBI ID   WP_410534158.1    Uniprot ID   -
Organism   Streptococcus salivarius strain KSS10     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 599037..610905
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V6U69_RS03100 (V6U69_03100) gshAB 599427..601691 (-) 2265 WP_410534156.1 bifunctional glutamate--cysteine ligase GshA/glutathione synthetase GshB -
  V6U69_RS03105 (V6U69_03105) - 602302..604047 (+) 1746 WP_410534157.1 ABC transporter ATP-binding protein -
  V6U69_RS03110 (V6U69_03110) rcrQ 604037..605905 (+) 1869 WP_410534158.1 ABC transporter ATP-binding protein Regulator
  V6U69_RS03115 (V6U69_03115) - 605998..607522 (-) 1525 Protein_591 ATP-binding cassette domain-containing protein -
  V6U69_RS03120 (V6U69_03120) - 607957..609045 (+) 1089 WP_410534159.1 hypothetical protein -

Sequence

Protein


Download         Length: 622 a.a.        Molecular weight: 68641.03 Da        Isoelectric Point: 5.0598

>NTDB_id=853953 V6U69_RS03110 WP_410534158.1 604037..605905(+) (rcrQ) [Streptococcus salivarius strain KSS10]
MQNKKKANWGSLARLLRFLWQDYKLSLSIAFVLIVVASLATVNLTASIQSLVDVYVQPMLKSGSHDFGPLLRFLTSVGVF
CLIGVVANYVASLLMATISQDSLRSLRNQLFARMQKLPIRYFDTHQHGDIMSIYTNDIDALRQAVEQSIPQLLQTAITLI
GVTVTMLTVSPLLFIVVLVMVGIMFMVIKNVSAKSGRYFGEQQKNLGIENGFIEEMMSGQKVVKAFVHEEESMADFDKIN
EQLFESSYLANRYASVLMPILGNLGNVSFVLTALVGGLFALNGVGGLTIGGLMAFLQLNRSFNGPITQVSQQLNFVLMAL
AGADRIFDLLDEAEEVDQGKVTLVNYELVDGQMVVTDKKTNLWAWKHPRPNGDYELVELVGNVVFQDVDFSYDGKKQILH
GVNLYADKGQKVAFVGATGAGKTTITNLINRFYDIQSGVITYDGIDVKLIEKDSLRRSLGIVLQDTHLFTGTIAENIAYG
RSDATREEILEAARIANVDSFVQHLDNGYDTVLTDDGAGLSNGQRQLIAIARAALANAPVLILDEATSSIDSRTEKMVQE
GMDRLMEGRTVFVIAHRLSTIVNSDVIMVMDHGRIIERGDHDSLMEQGGTYYRLYTGGLEID

Nucleotide


Download         Length: 1869 bp        

>NTDB_id=853953 V6U69_RS03110 WP_410534158.1 604037..605905(+) (rcrQ) [Streptococcus salivarius strain KSS10]
ATGCAGAATAAGAAAAAAGCAAATTGGGGATCTCTAGCACGTCTTCTACGCTTTTTGTGGCAAGACTACAAACTTTCGCT
TAGTATTGCCTTTGTCCTCATTGTTGTTGCTTCTTTGGCAACGGTCAATTTGACGGCTTCTATTCAGTCCTTGGTTGACG
TTTACGTTCAACCCATGCTCAAATCTGGTAGCCATGACTTTGGGCCATTGTTACGTTTCTTGACGTCAGTTGGGGTCTTT
TGTCTTATCGGTGTGGTTGCCAACTATGTGGCTTCCCTCCTTATGGCGACGATTTCACAAGATTCCCTGCGTTCCCTTCG
TAATCAGCTTTTTGCTCGTATGCAAAAGCTTCCGATTCGCTACTTTGACACTCACCAACACGGGGACATCATGTCTATCT
ATACCAATGACATCGATGCCCTTCGTCAGGCTGTTGAGCAGTCTATTCCGCAGTTGTTACAAACGGCCATTACCCTTATC
GGGGTGACTGTAACCATGCTTACGGTTAGTCCCCTTCTCTTTATCGTGGTCCTAGTCATGGTAGGCATCATGTTTATGGT
CATCAAAAATGTATCAGCCAAATCAGGTCGTTACTTCGGTGAACAACAAAAGAACCTAGGGATTGAGAATGGTTTTATCG
AAGAAATGATGTCAGGTCAAAAGGTAGTCAAGGCCTTCGTCCACGAAGAAGAAAGCATGGCTGACTTCGACAAGATTAAT
GAACAACTCTTTGAATCTTCTTACTTGGCCAACCGCTATGCCAGTGTTCTCATGCCAATTCTTGGGAACTTAGGAAATGT
TTCCTTTGTTTTGACTGCCCTGGTTGGTGGACTCTTCGCTCTAAATGGTGTCGGTGGTTTGACTATCGGTGGTCTCATGG
CCTTCCTACAATTGAACCGTTCCTTCAACGGCCCAATTACTCAGGTGTCTCAACAACTTAACTTTGTCCTTATGGCCCTT
GCTGGTGCTGACCGTATCTTTGACCTTTTGGATGAAGCAGAAGAAGTTGACCAAGGTAAGGTCACTTTGGTCAACTACGA
ATTGGTAGACGGTCAGATGGTTGTCACAGACAAGAAAACCAATCTCTGGGCTTGGAAACACCCACGTCCAAATGGTGACT
ACGAATTGGTTGAGTTGGTCGGGAATGTGGTCTTCCAAGACGTTGATTTCTCTTACGATGGTAAGAAACAAATCCTTCAT
GGCGTTAACCTCTATGCAGACAAGGGGCAAAAGGTAGCCTTTGTCGGTGCGACAGGTGCTGGTAAGACGACGATTACCAA
TTTGATTAATCGTTTCTACGACATCCAATCTGGTGTGATTACTTATGATGGTATCGATGTGAAGCTGATTGAAAAAGATT
CTCTTCGCCGATCACTTGGTATCGTGCTTCAAGATACCCATCTCTTCACAGGGACTATCGCTGAAAATATTGCCTACGGC
CGTTCTGATGCGACTCGCGAGGAAATTCTTGAAGCTGCTCGTATTGCTAACGTGGATTCCTTTGTTCAACATCTGGACAA
TGGTTACGACACTGTTCTGACAGACGATGGTGCAGGCTTGTCTAATGGACAACGTCAGCTGATTGCCATTGCGCGTGCTG
CCCTTGCTAATGCACCGGTTCTTATCCTTGACGAAGCGACATCCTCTATTGACTCTCGTACCGAAAAAATGGTGCAAGAG
GGGATGGACCGACTTATGGAAGGACGTACAGTCTTCGTTATTGCCCACCGTCTTTCAACTATTGTCAACTCTGACGTTAT
CATGGTTATGGACCACGGACGAATCATTGAACGTGGTGACCATGACAGCCTTATGGAGCAAGGTGGTACTTACTACCGAC
TCTATACTGGTGGTCTTGAAATTGATTAA

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(29-305)

ABC transporter (ABC_tran)

(399-548)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

36.911

98.875

0.365