Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutS/mutS2   Type   Machinery gene
Locus tag   V6U69_RS01305 Genome accession   NZ_CP145867
Coordinates   228079..230427 (-) Length   782 a.a.
NCBI ID   WP_410533946.1    Uniprot ID   -
Organism   Streptococcus salivarius strain KSS10     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 223079..235427
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V6U69_RS01285 (V6U69_01285) lepB 225257..225898 (-) 642 WP_181670720.1 signal peptidase I -
  V6U69_RS01290 (V6U69_01290) rnhC 225917..226807 (-) 891 WP_070437981.1 ribonuclease HIII -
  V6U69_RS01295 (V6U69_01295) zapA 227124..227438 (+) 315 WP_004183554.1 cell division protein ZapA -
  V6U69_RS01300 (V6U69_01300) - 227435..227977 (+) 543 WP_002884677.1 CvpA family protein -
  V6U69_RS01305 (V6U69_01305) mutS/mutS2 228079..230427 (-) 2349 WP_410533946.1 endonuclease MutS2 Machinery gene
  V6U69_RS01310 (V6U69_01310) polA 230602..233241 (+) 2640 WP_201041039.1 DNA polymerase I -
  V6U69_RS01315 (V6U69_01315) - 233658..234758 (+) 1101 WP_410533948.1 DUF6287 domain-containing protein -

Sequence

Protein


Download         Length: 782 a.a.        Molecular weight: 87578.85 Da        Isoelectric Point: 6.4811

>NTDB_id=853926 V6U69_RS01305 WP_410533946.1 228079..230427(-) (mutS/mutS2) [Streptococcus salivarius strain KSS10]
MNTKILDQLEFNKVKDQFTEYLQTEQAQAELRDLVPMTNPERIQNQFTEIQEMAEILVEHHGFAIGSLRDISEPLRRLEL
DADLNIQELIAIKKVLQASADLGRFYADLENVELVALKRLFEKIEAFPSLQGSLQSINDGGFIEHFASPELQNIRRQLKS
CDDAIRQTLQDILKKSGHMLAESLIASRNGRSVLPVKNTYRNRIAGVVHDISSSGNTVYIEPRAVIQLNEEITQLRADER
HEMARILHELSDQLRPQAAAIANNAWILGHMDFIRGKYLYLQDKKAVIPKISDNQTLQLLNVRHPLLVNPVANDLRFDED
LTAIVITGPNTGGKTVMLKTLGLAQLMAQSGLPILADKGSRVAIFQEIFADIGDEQSIEQSLSTFSSHMTHIVEILDAAD
SNSLVLVDELGAGTDPQEGASLAMAILEHLRLSQIKAMATTHYPELKAYGIETQHVENASMEFDTTTLSPTYRFMQGVPG
RSNAFEIARRLGLNEIIVKEAENLTDNDSDVNRIIEQLEAQSVETQKRLEHIKDVEQENLKFNRAVKKLYNEFSHEYDKE
LEKAQKEIQEMVDTALAESDSILKNLHDKSQLKPHEVIDAKGKLKKLSPQVDLSKNKVLRKAKKEKAARAPRVGDDIIVT
AYGQRGTLTSQAKNGNWEAQVGLIKMTLKADEFTLVRAQAEAQQPKKKQINVVKKAKKASGGPRARLDLRGKRYEEAMQE
LDAFIDQALLNNMSQVDIIHGIGTGVIRDAVTKYLRRHRHVKSFEYAPQSAGGSGCTIATLG

Nucleotide


Download         Length: 2349 bp        

>NTDB_id=853926 V6U69_RS01305 WP_410533946.1 228079..230427(-) (mutS/mutS2) [Streptococcus salivarius strain KSS10]
ATGAACACAAAGATTTTAGACCAATTAGAATTTAACAAGGTCAAGGACCAGTTCACAGAATACCTGCAGACCGAACAGGC
TCAGGCGGAGTTACGTGACTTGGTGCCTATGACCAATCCAGAGAGAATTCAAAATCAATTTACAGAAATCCAAGAAATGG
CAGAGATTCTCGTAGAACACCACGGCTTTGCCATTGGTAGCTTGCGAGATATTTCTGAACCCTTGCGTCGCTTGGAATTG
GATGCTGACCTCAACATTCAGGAGCTTATTGCCATCAAGAAGGTGCTGCAAGCTTCAGCTGACCTTGGTCGCTTCTACGC
TGACCTTGAAAATGTTGAGCTCGTCGCTCTAAAACGTCTTTTCGAAAAGATTGAGGCCTTCCCAAGTCTACAAGGCAGCC
TTCAAAGTATCAATGATGGTGGTTTCATTGAACATTTTGCTAGCCCTGAGTTGCAGAATATCCGTCGTCAACTCAAATCT
TGCGATGATGCCATTCGCCAGACCTTGCAAGACATTCTCAAGAAATCTGGTCACATGTTGGCTGAGAGTCTGATTGCTAG
TCGTAATGGTCGTTCAGTGCTGCCTGTCAAAAATACCTACCGTAACCGTATTGCTGGGGTTGTGCATGACATCTCAAGCT
CTGGAAACACAGTGTATATCGAGCCACGCGCCGTTATCCAGCTTAACGAAGAAATTACACAATTACGTGCAGATGAACGC
CATGAGATGGCCCGCATCCTGCATGAACTATCTGATCAACTCCGTCCTCAAGCTGCCGCTATTGCTAACAACGCTTGGAT
TTTGGGTCACATGGACTTTATTCGAGGAAAATACCTCTATCTCCAGGATAAGAAAGCGGTTATCCCAAAGATTAGTGACA
ACCAAACACTCCAACTCCTTAACGTTCGTCACCCTCTTTTGGTCAATCCAGTAGCCAACGATTTACGCTTTGATGAGGAC
CTCACAGCCATTGTCATTACAGGTCCCAATACCGGTGGTAAAACGGTCATGCTTAAAACTCTAGGATTAGCTCAACTGAT
GGCTCAATCTGGTCTTCCAATTTTGGCTGATAAGGGTAGTCGTGTAGCCATTTTCCAAGAGATTTTTGCGGACATCGGAG
ATGAACAGTCTATCGAACAGAGTTTGTCAACTTTCTCTAGTCACATGACCCACATTGTCGAGATTCTGGACGCTGCCGAC
AGCAACAGTCTTGTCTTGGTCGATGAGCTTGGGGCTGGTACGGACCCTCAGGAAGGGGCTAGTCTAGCCATGGCAATCCT
AGAGCACCTCCGTTTGAGCCAGATTAAAGCCATGGCTACTACTCACTATCCTGAGCTTAAGGCCTATGGGATTGAGACGC
AACATGTGGAAAATGCCAGCATGGAGTTTGACACAACGACTTTAAGCCCTACCTATCGTTTTATGCAGGGAGTTCCTGGT
CGCTCTAACGCCTTTGAGATTGCTCGCCGCCTCGGTTTGAATGAAATTATTGTCAAAGAGGCAGAAAACCTCACGGATAA
TGATAGTGATGTCAACCGTATCATCGAGCAACTTGAAGCCCAATCTGTGGAAACACAAAAACGTCTGGAACACATCAAGG
ACGTTGAGCAAGAGAACCTTAAATTCAACCGTGCGGTCAAGAAACTCTATAACGAATTCTCCCATGAGTACGACAAGGAA
CTTGAAAAAGCTCAAAAAGAAATTCAAGAGATGGTGGATACAGCTTTGGCTGAGAGCGATAGTATTCTCAAAAATCTCCA
CGATAAGAGTCAACTCAAACCTCATGAAGTTATCGACGCCAAAGGAAAACTCAAGAAACTTTCCCCACAAGTGGACCTCT
CTAAGAATAAAGTCCTTCGTAAAGCCAAGAAAGAAAAGGCTGCGCGTGCCCCTCGTGTCGGAGATGATATCATCGTTACC
GCCTATGGTCAACGTGGTACCCTTACCAGTCAAGCCAAAAATGGTAATTGGGAAGCCCAGGTAGGTCTCATCAAGATGAC
ACTCAAGGCGGATGAATTTACTCTTGTTCGTGCCCAAGCGGAAGCCCAACAACCTAAGAAGAAACAGATTAACGTGGTTA
AAAAAGCCAAAAAGGCATCTGGCGGTCCTCGTGCCCGTCTAGACCTTCGTGGGAAACGTTACGAAGAAGCCATGCAAGAG
CTTGATGCCTTTATTGACCAAGCCCTACTTAATAACATGAGTCAGGTGGACATCATCCACGGTATTGGAACAGGTGTCAT
CCGTGATGCTGTTACCAAATATCTCCGCCGTCATCGACATGTTAAAAGTTTTGAATATGCCCCACAAAGTGCTGGTGGTT
CCGGATGTACCATTGCAACCTTAGGGTAA

Domains

Predicted by InterProScan.

MutS domain V (MutS_V)

(324-505)

MutS2 and Smr-associated SH3 domain (MSSS)

(633-672)

Smr domain (Smr)

(707-781)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutS/mutS2 Bacillus subtilis subsp. subtilis str. 168

39.47

100

0.4