Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutS/mutS2   Type   Machinery gene
Locus tag   V6U68_RS08825 Genome accession   NZ_CP145866
Coordinates   1918883..1921231 (+) Length   782 a.a.
NCBI ID   WP_410531660.1    Uniprot ID   -
Organism   Streptococcus salivarius strain KSS9     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1913883..1926231
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V6U68_RS08810 (V6U68_08790) - 1914285..1914410 (-) 126 WP_353551519.1 hypothetical protein -
  V6U68_RS08815 (V6U68_08795) - 1914559..1915653 (-) 1095 WP_410531658.1 DUF6287 domain-containing protein -
  V6U68_RS08820 (V6U68_08800) polA 1916069..1918708 (-) 2640 WP_410531659.1 DNA polymerase I -
  V6U68_RS08825 (V6U68_08805) mutS/mutS2 1918883..1921231 (+) 2349 WP_410531660.1 endonuclease MutS2 Machinery gene
  V6U68_RS08830 (V6U68_08810) - 1921334..1921876 (-) 543 WP_145516544.1 CvpA family protein -
  V6U68_RS08835 (V6U68_08815) zapA 1921873..1922187 (-) 315 WP_004183554.1 cell division protein ZapA -
  V6U68_RS08840 (V6U68_08820) rnhC 1922504..1923394 (+) 891 WP_195435400.1 ribonuclease HIII -
  V6U68_RS08845 (V6U68_08825) lepB 1923413..1924054 (+) 642 WP_004183556.1 signal peptidase I -

Sequence

Protein


Download         Length: 782 a.a.        Molecular weight: 87632.86 Da        Isoelectric Point: 6.4825

>NTDB_id=853887 V6U68_RS08825 WP_410531660.1 1918883..1921231(+) (mutS/mutS2) [Streptococcus salivarius strain KSS9]
MNTKILDQLEFNKVKDQFTEYLQTEQAQAELRDLVPMTNPERIQNQFTEIQEMSEIFVEHHGFAIGSLRDISEPLRRLEL
DADLNIQELIAIKKVLQASADLGRFYADLENVELIALKRLFEKIEAFPSLQGSLQSINDGGFIEHFASPELQNIRRQLKS
CDDAIRQTLQDILKKSGHMLAESLIASRNGRSVLPVKNTYRNRIAGVVHDISSSGNTVYIEPRAVIQLNEEITQLRADER
HEMARILHELSDQLRPQAAAIANNAWILGHMDFIRGKYLYLHDKKAVIPKISDNQTLQLLNVRHPLLVNPVANDLHFDED
LTAIVITGPNTGGKTVMLKTLGLAQLMAQSGLPILADKGSRVAIFQEIFADIGDEQSIEQSLSTFSSHMTHIVEILNAAD
SNSLVLVDELGAGTDPQEGASLAMAILEHLRLSQIKTMATTHYPELKAYGIETQHVENASMEFDTATLSPTYRFMQGVPG
RSNAFEIARRLGLNEIIVNEAENLTDTDSDVNRIIEQLEAQTVETQKRLEHIKDVEQENLKFNRAVKKLYNEFSHEYDKE
LEKAQKEIQEMVDTALAESDSILKNLHDKSQLKPHEVIDAKGKLKKLAPQVDLSKNKVLRKAKKEKAARAPRVGDDIIVT
AYGQRGTLTSQAKNGNWEAQVGLIKMTLKADEFTLVRAQAEAQQPKKKQINVVKKAKKTSGGPRARLDLRGKRYEEAMQE
LDAFIDQALLNNMSQVDIIHGIGTGVIRDAVTKYLRRHRHVKSFEYAPQSAGGSGCTIATLG

Nucleotide


Download         Length: 2349 bp        

>NTDB_id=853887 V6U68_RS08825 WP_410531660.1 1918883..1921231(+) (mutS/mutS2) [Streptococcus salivarius strain KSS9]
ATGAACACAAAGATTTTAGACCAATTAGAATTTAACAAGGTCAAGGACCAGTTCACAGAATACCTGCAGACTGAACAGGC
ACAGGCGGAGTTGCGTGACTTGGTGCCTATGACCAATCCAGAAAGAATTCAAAATCAATTTACAGAAATCCAAGAAATGT
CTGAGATTTTCGTAGAGCACCATGGCTTTGCCATTGGTAGCTTGCGAGATATTTCTGAGCCCTTGCGTCGCTTGGAACTA
GATGCTGACCTCAACATTCAGGAGCTCATTGCCATCAAGAAGGTGCTACAAGCTTCAGCTGACCTCGGTCGCTTTTACGC
TGACCTTGAAAATGTAGAACTTATCGCCCTTAAACGTCTTTTCGAAAAGATTGAAGCCTTCCCAAGTCTACAAGGCAGTC
TTCAGAGCATCAATGACGGTGGTTTTATTGAGCATTTTGCTAGCCCAGAGTTGCAAAATATTCGTCGTCAACTCAAATCT
TGTGATGATGCCATTCGCCAGACCTTACAAGACATTCTCAAGAAATCTGGCCACATGTTGGCTGAGAGTTTGATTGCTAG
TCGTAACGGTCGTTCGGTGCTTCCTGTCAAAAACACCTACCGTAACCGTATTGCTGGAGTTGTGCATGACATCTCAAGCT
CTGGAAACACAGTATATATCGAGCCACGTGCCGTTATCCAGCTTAACGAAGAAATTACACAATTACGTGCAGACGAACGC
CACGAGATGGCTCGTATCCTGCATGAACTGTCTGATCAACTGCGCCCACAAGCTGCTGCTATCGCTAACAACGCTTGGAT
TTTGGGTCACATGGACTTCATTCGAGGAAAATACCTCTATCTCCATGATAAAAAAGCGGTTATTCCAAAGATTAGTGACA
ATCAAACCCTACAACTGCTTAACGTTCGTCACCCTCTTTTGGTCAATCCAGTAGCCAACGATTTGCACTTTGATGAGGAC
CTTACGGCCATTGTCATCACAGGTCCCAATACTGGTGGTAAAACGGTCATGCTTAAAACGCTAGGACTAGCACAACTAAT
GGCTCAATCTGGTCTTCCAATTTTGGCTGATAAGGGCAGCCGTGTCGCCATTTTCCAAGAGATTTTTGCGGACATCGGAG
ACGAACAGTCTATCGAACAAAGTTTGTCAACTTTCTCTAGTCACATGACCCACATTGTTGAGATTCTGAATGCTGCCGAC
AGTAACAGCCTGGTCTTGGTCGATGAGCTTGGGGCTGGTACCGACCCTCAGGAAGGAGCTAGTTTAGCCATGGCAATCTT
AGAGCACCTCCGTTTAAGTCAGATTAAGACCATGGCTACTACTCACTATCCTGAGCTTAAGGCCTATGGGATTGAGACGC
AACATGTGGAAAATGCCAGCATGGAGTTTGACACAGCGACTTTAAGCCCTACCTATCGTTTTATGCAAGGGGTTCCTGGT
CGTTCTAATGCCTTTGAAATTGCTCGACGCCTCGGTTTGAATGAGATTATTGTCAATGAGGCAGAAAACCTCACGGATAC
TGATAGTGATGTCAACCGTATCATCGAGCAACTTGAAGCCCAAACTGTGGAAACACAAAAACGTCTGGAACACATCAAGG
ACGTGGAGCAAGAGAACCTTAAATTCAACCGTGCGGTCAAGAAACTCTATAACGAATTCTCCCATGAATACGACAAGGAA
CTCGAAAAGGCTCAAAAAGAAATTCAAGAGATGGTTGATACCGCTTTGGCTGAGAGCGATAGTATTCTCAAAAATCTCCA
CGATAAGAGTCAACTCAAACCTCATGAAGTTATCGACGCCAAAGGAAAACTCAAGAAACTTGCCCCACAAGTGGACCTCT
CTAAGAATAAGGTCCTTCGTAAGGCTAAGAAAGAAAAGGCTGCGCGTGCCCCTCGTGTTGGAGATGATATCATCGTTACC
GCCTATGGGCAACGTGGTACCCTTACCAGTCAAGCCAAAAATGGTAACTGGGAAGCTCAGGTCGGTCTCATCAAGATGAC
CCTCAAGGCAGACGAATTCACTCTGGTTCGTGCCCAAGCTGAAGCCCAACAACCTAAGAAGAAACAGATTAACGTGGTTA
AAAAAGCCAAGAAGACATCTGGCGGTCCTCGTGCCCGTCTAGACCTTCGTGGGAAACGTTACGAAGAAGCCATGCAAGAG
CTTGATGCCTTTATTGACCAAGCCCTACTTAATAACATGAGTCAGGTGGACATCATCCACGGTATTGGTACAGGTGTCAT
CCGTGATGCTGTCACCAAATATCTCCGCCGTCATCGCCATGTTAAAAGTTTTGAATATGCCCCACAAAGTGCTGGTGGTT
CCGGATGTACCATTGCAACCTTAGGGTAA

Domains

Predicted by InterProScan.

Smr domain (Smr)

(707-781)

MutS domain V (MutS_V)

(324-505)

MutS2 and Smr-associated SH3 domain (MSSS)

(633-672)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutS/mutS2 Bacillus subtilis subsp. subtilis str. 168

39.596

100

0.402