Detailed information NTG0853770

Bioinformatically predicted

Overview

• Name: recD/recD2/recDB
• Type: Machinery gene
• Locus tag: V6U67_RS08640
• Genome accession: NZ_CP145865
• Coordinates: 1893239..1895743 (+)
• Length: 834 a.a.
• NCBI ID: WP_410531179.1
• Uniprot ID: -
• Organism: Streptococcus salivarius strain KSS8
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1888239..1900743

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V6U67_RS08620 (V6U67_08625)	-	1890449..1890991 (-)	543	WP_002884677.1	CvpA family protein	-
V6U67_RS08625 (V6U67_08630)	-	1890988..1891302 (-)	315	WP_037611266.1	hypothetical protein	-
V6U67_RS08630 (V6U67_08635)	rnhC	1891619..1892509 (+)	891	WP_037611250.1	ribonuclease HIII	-
V6U67_RS08635 (V6U67_08640)	lepB	1892528..1893178 (+)	651	WP_037611251.1	signal peptidase I	-
V6U67_RS08640 (V6U67_08645)	recD/recD2/recDB	1893239..1895743 (+)	2505	WP_410531179.1	ATP-dependent RecD-like DNA helicase	Machinery gene
V6U67_RS08645 (V6U67_08650)	-	1895795..1896121 (-)	327	WP_037611255.1	AzlD domain-containing protein	-
V6U67_RS08650 (V6U67_08655)	-	1896108..1896800 (-)	693	WP_002884750.1	AzlC family ABC transporter permease	-
V6U67_RS08655 (V6U67_08660)	tsaD	1896852..1897865 (-)	1014	WP_037611258.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	-
V6U67_RS08660 (V6U67_08665)	rimI	1897865..1898320 (-)	456	WP_037611259.1	ribosomal protein S18-alanine N-acetyltransferase	-
V6U67_RS08665 (V6U67_08670)	tsaB	1898280..1898966 (-)	687	WP_037611260.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	-
V6U67_RS08670 (V6U67_08675)	-	1899227..1899457 (+)	231	WP_022495963.1	DNA-dependent RNA polymerase subunit epsilon	-

Sequence

Protein

• Length: 834 a.a.
• Molecular weight: 94103.44 Da
• Isoelectric Point: 4.4600

>NTDB_id=853770 V6U67_RS08640 WP_410531179.1 1893239..1895743(+) (recD/recD2/recDB) [Streptococcus salivarius strain KSS8]
MQEFYFSGTIERVIFENASNFFRILLLEIDETDSDFEDYEIIVTGTMGDVMEGEDYTFWGQLTNHPKYGEQLQMTRYERS
KPSASGLIKYFASDNFKGIGKKTAERFVEIYGEDPIDKILEDPSKLEQIPNLSKVNREAFVAKLKINYGTEQILSKLSSY
GLTPKAASQIFNQYKEESLNLIEEHPYLLVEEVQGIGFKIADQLAERLGIASDAPERLRAALIHCLLEASMEEGDTYIEA
KALLERTIILLESARQIELDPALVAKELTNLIQEDKVQNVETKIFDNTLYFAEQGIYTHLTRIMKDQPDISAEDKIQASL
EEVEEELGITYDKVQKDAIIKALQSKVFILTGGPGTGKTTVINGIIKTYADLHGLDLKKSDLPIILAAPTGRAARRMNEL
TQLPSATIHRHLGLNSEDDFKTLEDYLDCDLIIIDEFSMVDTWLANQLFESISDSTQVIIVGDQDQLPSVGPGQVLADLL
QIDNLPKVSLTKIFRQSEDSTIVTLASQMRQGQLPADFTEKKADRSYFEANANHIPQMVPKIVSAAIKSGVAAQDVQILA
PMYRGQAGINNLNTIMQDLLNPQEKANQFAFNDIFFRKNDKILHLVNDTELNVFNGDIGIITDLIPGKYTESKQDEIYMS
FDGNEVIYPRNEWNKITLAYAMSIHKSQGSEFPVVILPITRQSGRMLQRNLIYTAITRAKSKLVMLGEIAAFDYAVRNEG
AKRNTFLIQRFEQTYTQAVDKSVEKIVKNEATEAPNQTKTKNNYPSETFENKDFSENINPSPDLVNTYSQPVDKSVNKPV
QTEENYRLTEENWATIDPMIGLSEDDIAAFFNNN

Nucleotide

• Length: 2505 bp

>NTDB_id=853770 V6U67_RS08640 WP_410531179.1 1893239..1895743(+) (recD/recD2/recDB) [Streptococcus salivarius strain KSS8]
ATGCAAGAATTTTATTTTTCAGGAACTATCGAACGCGTCATTTTCGAAAACGCTAGTAATTTTTTCCGTATTCTACTCTT
AGAAATTGACGAAACAGACAGTGATTTTGAGGACTATGAAATCATTGTTACAGGAACCATGGGAGATGTCATGGAAGGTG
AAGATTATACCTTCTGGGGTCAGCTAACCAATCATCCCAAATATGGTGAACAACTCCAAATGACGCGCTACGAACGGTCA
AAACCTTCTGCTAGCGGTCTTATCAAGTATTTCGCCAGCGACAATTTTAAGGGGATTGGTAAGAAAACAGCTGAGCGTTT
TGTCGAGATTTATGGTGAAGACCCTATTGACAAGATTCTCGAGGATCCGAGCAAATTAGAACAGATTCCTAATCTGTCCA
AGGTCAATCGAGAAGCCTTCGTTGCAAAGTTAAAAATCAACTATGGAACCGAGCAAATCTTGTCCAAACTTTCCAGCTAT
GGACTCACACCAAAAGCTGCCTCACAAATTTTCAACCAATATAAGGAAGAATCGCTCAACCTTATCGAGGAACACCCTTA
TCTCTTGGTAGAGGAAGTTCAAGGAATCGGATTTAAAATAGCTGACCAACTAGCCGAACGCTTAGGAATTGCTAGTGATG
CTCCTGAACGTTTACGAGCTGCCTTGATTCATTGTCTGCTAGAAGCTAGCATGGAAGAAGGCGACACCTATATCGAAGCC
AAAGCCTTGCTTGAACGAACTATCATCCTTTTGGAAAGTGCTCGTCAGATTGAACTTGACCCCGCCTTAGTCGCGAAGGA
ATTAACCAATCTCATCCAAGAGGATAAGGTACAAAATGTAGAGACTAAAATCTTTGATAATACCCTATATTTTGCGGAAC
AGGGCATCTATACCCACCTAACTCGTATCATGAAAGACCAACCTGACATTAGTGCTGAGGACAAAATCCAAGCAAGTCTT
GAAGAGGTGGAAGAGGAGCTTGGTATTACTTATGATAAGGTTCAAAAAGATGCCATTATCAAAGCCCTACAAAGCAAGGT
CTTCATCCTGACAGGTGGCCCCGGAACAGGGAAAACCACTGTTATTAACGGCATTATTAAAACCTATGCCGACCTTCATG
GTCTAGATCTCAAAAAGTCTGATTTGCCTATTATTTTAGCGGCACCAACGGGACGGGCTGCTCGTCGAATGAACGAACTC
ACCCAACTCCCTAGTGCCACTATCCATAGACATTTGGGACTCAATAGCGAGGACGATTTCAAGACCTTAGAGGACTATCT
CGATTGCGACTTGATTATCATCGATGAGTTTTCTATGGTTGATACTTGGTTGGCCAACCAACTCTTTGAAAGTATCTCTG
ATTCAACCCAAGTCATCATTGTGGGTGACCAAGACCAGCTGCCTTCCGTAGGCCCTGGCCAGGTCTTGGCTGACCTTTTG
CAGATTGATAACTTGCCAAAGGTTTCCCTAACCAAAATTTTCAGACAATCCGAGGACTCCACCATCGTTACCTTAGCTAG
CCAGATGCGACAAGGGCAACTCCCCGCTGATTTCACAGAGAAAAAGGCTGACCGCTCTTACTTTGAGGCCAATGCCAACC
ATATTCCACAGATGGTTCCTAAAATTGTCTCTGCCGCTATAAAGAGTGGGGTTGCTGCTCAGGATGTGCAAATTTTAGCC
CCCATGTACCGAGGACAGGCTGGTATCAACAATCTCAATACCATTATGCAGGACCTACTTAATCCTCAAGAAAAGGCCAA
TCAGTTTGCCTTTAATGACATTTTCTTCCGTAAGAACGACAAAATTCTCCATCTGGTCAACGATACCGAACTCAATGTCT
TCAACGGCGACATCGGCATCATTACTGATCTCATCCCTGGTAAATATACTGAAAGCAAGCAGGACGAAATTTACATGTCC
TTTGATGGCAATGAGGTTATCTATCCTCGTAACGAATGGAATAAGATTACTCTGGCCTATGCCATGTCAATCCACAAATC
CCAAGGGAGTGAGTTCCCAGTCGTTATCCTTCCTATCACACGACAAAGTGGACGTATGCTACAACGTAACCTCATCTACA
CCGCTATCACACGCGCCAAGAGTAAGCTAGTCATGTTAGGGGAAATCGCAGCCTTTGATTATGCCGTTCGCAACGAAGGA
GCTAAACGAAATACTTTTCTCATCCAACGTTTTGAACAAACTTATACACAAGCTGTTGATAAGTCTGTCGAAAAGATTGT
TAAAAACGAGGCAACAGAGGCACCCAATCAAACAAAAACGAAAAACAACTACCCCTCAGAAACCTTTGAAAACAAAGACT
TCTCGGAAAATATCAATCCATCCCCAGATCTTGTTAACACTTATTCACAACCTGTGGATAAGTCTGTTAACAAACCTGTG
CAAACAGAAGAAAACTATCGTTTAACTGAAGAAAATTGGGCAACTATAGATCCAATGATTGGGCTCAGTGAAGACGATAT
TGCTGCTTTTTTTAACAATAACTAA

Domains

Predicted by InterProScan.

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (572-638)

• Helix-hairpin-helix containing domain (HHH_RecD2) (147-237)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (659-705)

• AAA domain (AAA_30) (331-523)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD/recD2/recDB	Bacillus subtilis subsp. subtilis str. 168	45.067	89.928	0.405