Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutS/mutS2   Type   Machinery gene
Locus tag   V6U67_RS08615 Genome accession   NZ_CP145865
Coordinates   1887999..1890347 (+) Length   782 a.a.
NCBI ID   WP_179969034.1    Uniprot ID   -
Organism   Streptococcus salivarius strain KSS8     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1882999..1895347
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V6U67_RS08605 (V6U67_08610) - 1883674..1884768 (-) 1095 WP_037611246.1 DUF6287 domain-containing protein -
  V6U67_RS08610 (V6U67_08615) polA 1885185..1887824 (-) 2640 WP_179969033.1 DNA polymerase I -
  V6U67_RS08615 (V6U67_08620) mutS/mutS2 1887999..1890347 (+) 2349 WP_179969034.1 endonuclease MutS2 Machinery gene
  V6U67_RS08620 (V6U67_08625) - 1890449..1890991 (-) 543 WP_002884677.1 CvpA family protein -
  V6U67_RS08625 (V6U67_08630) - 1890988..1891302 (-) 315 WP_037611266.1 hypothetical protein -
  V6U67_RS08630 (V6U67_08635) rnhC 1891619..1892509 (+) 891 WP_037611250.1 ribonuclease HIII -
  V6U67_RS08635 (V6U67_08640) lepB 1892528..1893178 (+) 651 WP_037611251.1 signal peptidase I -

Sequence

Protein


Download         Length: 782 a.a.        Molecular weight: 87713.04 Da        Isoelectric Point: 6.5572

>NTDB_id=853769 V6U67_RS08615 WP_179969034.1 1887999..1890347(+) (mutS/mutS2) [Streptococcus salivarius strain KSS8]
MNTKILDQLEFNKVKDQFTEYLQTEQAQAELRDLVPMTNPERIQNQFTEIQEMSEIFVEHHGFAIGSLRDISEPLRRLEL
DADLNIQELIAIKKVLQASADLGRFYADLENVELVALKRLFEKIEAFPSLQGSLQSINDRGFIEHFASPELQNIRRQLKS
CDDAIRQTLQDILKKSGHMLAESLIASRNGRSVLPVKNTYRNRIAGVVHDISSSGNTVYIEPRAVIQLNEEITQLRADER
HEMARILHELSDQLRPQAAAIANNAWILGHMDFIRGKYLYLQDKKAVIPKISDNQTLQLLNVRHPLLVNPVANDLRFDED
LTAIVITGPNTGGKTVMLKTLGLAQLMAQSGLPILADKGSRVAIFQEIFADIGDEQSIEQSLSTFSSHMTHIVEILDAAD
SNSLVLVDELGAGTDPQEGASLAMAILEHLRLSQIKTMATTHYPELKAYGIETQHVENASMEFDTATLSPTYRFMQGVPG
RSNAFEIARRLGLNEIIVKEAENLTDTDSDVNRIIEQLEAQTVETQKRLEHIKDVEQENLKFNRAVKKLYNEFSHEYDKE
LEKAQKEIQEMVDTALAESDSILKNLHDKSQLKPHEVIDAKGKLKKLAPQVDLSKNKVLRKAKKEKAARAPRVGDDIIVT
AYGQRGTLTSQAKNGNWEAQVGLIKMTLKADEFTLVRAQAEAQQPKKKQINVVKKAKKASGGPRARLDLRGKRYEEAMQE
LDAFIDQALLNNMSQVDIIHGIGTGVIRDAVTKYLRRHRHVKSFEYAPQSAGGSGCTIATLG

Nucleotide


Download         Length: 2349 bp        

>NTDB_id=853769 V6U67_RS08615 WP_179969034.1 1887999..1890347(+) (mutS/mutS2) [Streptococcus salivarius strain KSS8]
ATGAACACAAAGATTTTAGACCAATTAGAATTTAACAAGGTCAAGGACCAGTTCACAGAATACCTGCAGACTGAACAGGC
TCAGGCGGAGTTGCGTGACTTGGTGCCTATGACCAATCCAGAAAGAATTCAAAATCAATTTACAGAAATCCAAGAAATGT
CTGAGATTTTCGTAGAGCACCATGGCTTTGCCATTGGTAGCCTGAGAGATATTTCTGAGCCCTTACGTCGCTTGGAACTG
GATGCTGATCTCAATATCCAGGAGCTCATTGCCATCAAGAAGGTGCTGCAAGCTTCGGCTGACCTTGGTCGCTTCTACGC
TGACCTTGAAAATGTTGAGCTCGTCGCTCTTAAACGTCTTTTCGAAAAGATTGAGGCCTTCCCAAGTCTACAAGGCAGCC
TTCAAAGTATCAATGATCGTGGTTTTATTGAGCATTTTGCTAGCCCTGAGTTGCAGAATATCCGTCGTCAACTCAAATCT
TGCGATGATGCCATTCGCCAGACCTTGCAAGACATTCTCAAAAAATCTGGCCACATGTTGGCTGAGAGTCTGATTGCTAG
TCGTAATGGTCGTTCAGTGCTTCCTGTCAAAAATACCTACCGTAACCGTATTGCTGGGGTTGTGCATGACATCTCAAGCT
CCGGAAACACAGTGTATATCGAGCCACGCGCCGTTATCCAACTTAACGAAGAAATTACACAATTACGTGCAGACGAACGC
CATGAGATGGCTCGTATCCTGCATGAATTGTCTGATCAACTCCGTCCACAAGCTGCTGCTATCGCTAACAACGCTTGGAT
TTTGGGCCACATGGACTTCATTCGAGGAAAATACCTCTATCTCCAAGATAAGAAGGCGGTTATCCCAAAGATTAGTGACA
ACCAAACACTCCAACTGCTTAACGTTCGTCACCCGCTCTTGGTCAATCCAGTGGCCAACGATTTGCGCTTTGATGAGGAC
CTCACAGCCATTGTCATTACAGGTCCCAATACCGGTGGTAAAACGGTCATGCTTAAAACTCTAGGATTAGCACAACTGAT
GGCTCAATCTGGTCTTCCAATTTTGGCTGATAAGGGCAGTCGTGTAGCCATTTTCCAAGAGATTTTTGCCGACATCGGAG
ATGAACAGTCTATCGAACAGAGTTTGTCAACATTCTCTAGTCACATGACTCACATTGTCGAGATTCTGGATGCTGCCGAC
AGCAACAGTCTTGTCTTGGTCGATGAGCTCGGGGCTGGTACTGACCCTCAGGAAGGGGCTAGTCTAGCCATGGCAATCCT
AGAGCACCTCCGTTTGAGCCAGATTAAAACCATGGCTACTACTCACTATCCTGAGCTTAAGGCCTATGGGATTGAGACGC
AACATGTGGAAAATGCCAGCATGGAGTTTGACACAGCGACTTTAAGCCCTACCTATCGTTTTATGCAGGGAGTTCCTGGT
CGCTCTAACGCCTTTGAGATTGCTCGCCGCCTCGGTTTGAATGAAATTATTGTCAAGGAGGCAGAAAACCTCACGGATAC
TGATAGTGATGTCAACCGTATCATCGAGCAACTTGAAGCCCAAACTGTGGAAACACAAAAACGTCTGGAACACATCAAGG
ACGTTGAGCAAGAAAACCTTAAATTCAACCGTGCGGTCAAGAAACTCTATAATGAATTCTCCCATGAGTACGACAAGGAA
CTCGAAAAGGCTCAGAAAGAAATTCAAGAAATGGTGGATACAGCTTTGGCTGAGAGCGATAGTATTCTCAAAAATCTCCA
CGATAAGAGTCAACTCAAACCTCATGAAGTTATCGACGCCAAAGGAAAACTCAAGAAACTTGCCCCTCAAGTGGACCTCT
CTAAGAATAAGGTCCTTCGTAAGGCCAAGAAAGAAAAGGCTGCGCGTGCCCCTCGTGTCGGAGATGATATCATCGTTACC
GCCTATGGTCAACGTGGTACGCTTACCAGTCAAGCCAAAAATGGTAACTGGGAAGCCCAGGTAGGTCTCATCAAGATGAC
ACTCAAGGCGGATGAATTCACTCTTGTTCGTGCCCAAGCGGAAGCCCAACAACCTAAGAAGAAACAGATTAACGTGGTTA
AGAAAGCCAAAAAGGCATCTGGTGGTCCTCGTGCTCGTCTAGACCTTCGTGGGAAACGTTACGAAGAAGCCATGCAAGAG
CTTGATGCCTTTATTGACCAAGCCCTACTTAATAACATGAGTCAGGTGGACATCATCCACGGTATTGGTACAGGTGTCAT
CCGTGATGCCGTTACCAAATATCTCCGCCGTCATCGCCATGTTAAAAGTTTTGAATATGCCCCACAAAGTGCCGGTGGTT
CCGGATGTACCATTGCAACCTTAGGGTAA

Domains

Predicted by InterProScan.

MutS2 and Smr-associated SH3 domain (MSSS)

(633-672)

MutS domain V (MutS_V)

(324-505)

Smr domain (Smr)

(707-781)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutS/mutS2 Bacillus subtilis subsp. subtilis str. 168

39.596

100

0.402