Detailed information NTG0853657

Bioinformatically predicted

Overview

• Name: recD/recD2/recDB
• Type: Machinery gene
• Locus tag: V6U66_RS09435
• Genome accession: NZ_CP145864
• Coordinates: 2022055..2024559 (+)
• Length: 834 a.a.
• NCBI ID: WP_049527805.1
• Uniprot ID: -
• Organism: Streptococcus salivarius strain KSS7
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2017055..2029559

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V6U66_RS09415 (V6U66_09395)	-	2019266..2019808 (-)	543	WP_045771669.1	CvpA family protein	-
V6U66_RS09420 (V6U66_09400)	zapA	2019805..2020119 (-)	315	WP_004183554.1	cell division protein ZapA	-
V6U66_RS09425 (V6U66_09405)	rnhC	2020435..2021325 (+)	891	WP_045771670.1	ribonuclease HIII	-
V6U66_RS09430 (V6U66_09410)	lepB	2021344..2021994 (+)	651	WP_221739280.1	signal peptidase I	-
V6U66_RS09435 (V6U66_09415)	recD/recD2/recDB	2022055..2024559 (+)	2505	WP_049527805.1	ATP-dependent RecD-like DNA helicase	Machinery gene
V6U66_RS09440 (V6U66_09420)	-	2024611..2024937 (-)	327	WP_049527803.1	AzlD domain-containing protein	-
V6U66_RS09445 (V6U66_09425)	-	2024924..2025616 (-)	693	WP_002884750.1	AzlC family ABC transporter permease	-
V6U66_RS09450 (V6U66_09430)	tsaD	2025668..2026681 (-)	1014	WP_014635059.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	-
V6U66_RS09455 (V6U66_09435)	rimI	2026681..2027136 (-)	456	WP_048790109.1	ribosomal protein S18-alanine N-acetyltransferase	-
V6U66_RS09460 (V6U66_09440)	tsaB	2027096..2027782 (-)	687	WP_049527796.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	-
V6U66_RS09465 (V6U66_09445)	-	2028043..2028273 (+)	231	WP_002884752.1	DNA-dependent RNA polymerase subunit epsilon	-

Sequence

Protein

• Length: 834 a.a.
• Molecular weight: 94154.39 Da
• Isoelectric Point: 4.3921

>NTDB_id=853657 V6U66_RS09435 WP_049527805.1 2022055..2024559(+) (recD/recD2/recDB) [Streptococcus salivarius strain KSS7]
MQEFYFSGTIERVIFENASNFFRILLLEIDETDSDFEDYEIIVTGTMGDVMEGEDYTFWGQLTNHPKYGEQLQMTRYERS
KPSASGLIKYFASDNFKGIGKKTAERIVEIYGEDPIDKILEDPSKLEQIPNLSKVNREAFVAKLKINYGTEQILSKLSSY
GLTPKAASQIFNQYKEESLNLIEEHPYLLVEEVQGIGFKIADQLAERLGIASDAPERLRAALIHCLLEASMEEGDTYIEA
KALLERTIILLESARQIELDPALVAKELTNLIQEDKVQNIETKIFDNTLYFAEQGIYTHLTRIMKDQPDISAEDKIQASL
EEVEEELGITYDKVQKDAIINALQSKVFILTGGPGTGKTTVINGIIKTYTDLHGLDLKKSDLPIILAAPTGRAARRMNEL
TQLPSATIHRHLGLNSEDDFKTLEDYLDCDLIIIDEFSMVDTWLANQLFESISDSTQVIIVGDQDQLPSVGPGQVLADLL
QIDDLPKVSLTKIFRQSEDSTIVTLASQMRQGQLPADFTEKKADRSYFEANANHIPQMVPKIVSAAIKSGIAAQDVQILA
PMYRGQAGINNLNTIMQDLLNPQEKANQFAFNDIFFRKNDKILHLVNDTELNVFNGDIGIITDLIPDKYTESKQDEIYMS
FDGNEVIYPRNEWNKITLAYAMSIHKSQGSEFPVVILPITRQSGRMLQRNLIYTAITRAKSKLVMLGEIAAFDYAVRNEG
AKRNTYLIQRFEQTYTQAVDKSVEKIVKNEATEAPDQTKTKNNDPSETLENKDFSENINLSQDLVNTYSQPVDKSVNKPV
QTEENYRLTEENWATIDPMIGLSEDDIAAFFNNN

Nucleotide

• Length: 2505 bp

>NTDB_id=853657 V6U66_RS09435 WP_049527805.1 2022055..2024559(+) (recD/recD2/recDB) [Streptococcus salivarius strain KSS7]
ATGCAAGAATTTTATTTTTCAGGAACTATCGAACGCGTCATTTTCGAAAACGCTAGTAATTTTTTCCGTATTCTACTCTT
AGAAATTGACGAAACAGACAGTGATTTTGAGGACTATGAAATCATTGTTACAGGAACCATGGGAGATGTCATGGAAGGTG
AAGATTATACCTTCTGGGGTCAGCTAACCAATCATCCCAAATATGGTGAACAACTCCAAATGACGCGCTACGAACGGTCA
AAACCTTCTGCCAGCGGTCTTATCAAGTATTTCGCCAGCGACAATTTTAAGGGGATTGGTAAGAAAACAGCTGAGCGTAT
TGTCGAGATTTATGGTGAAGACCCTATTGACAAGATTCTCGAGGATCCTAGCAAGTTAGAACAGATTCCTAACCTTTCAA
AGGTAAACCGAGAAGCCTTCGTTGCAAAGTTAAAAATTAACTATGGAACCGAGCAAATCTTGTCCAAACTTTCCAGCTAT
GGACTCACACCAAAAGCTGCCTCACAAATTTTCAACCAATATAAGGAAGAATCGCTCAATCTTATCGAAGAACACCCTTA
TCTCTTGGTAGAGGAAGTTCAAGGAATCGGATTTAAAATAGCTGACCAACTAGCCGAACGCCTAGGGATTGCTAGTGATG
CTCCTGAGCGTTTACGAGCTGCCTTGATTCATTGTCTGCTAGAAGCCAGTATGGAAGAAGGCGACACCTATATCGAAGCC
AAAGCCTTGCTTGAACGAACTATCATCCTTTTGGAAAGTGCTCGTCAGATTGAACTTGACCCCGCCTTAGTCGCGAAGGA
ATTAACCAATCTCATCCAAGAGGATAAAGTGCAAAATATAGAAACTAAAATCTTTGATAATACCCTTTATTTTGCGGAAC
AGGGCATCTATACCCACCTAACTCGTATCATGAAAGACCAACCTGACATCAGTGCAGAGGACAAAATCCAAGCAAGTCTT
GAAGAGGTGGAAGAGGAACTTGGTATTACTTATGATAAGGTTCAAAAAGATGCCATTATCAACGCCCTACAAAGCAAGGT
CTTCATCCTGACAGGTGGTCCCGGGACAGGTAAAACCACCGTTATTAACGGAATCATTAAAACTTATACCGACCTTCATG
GTCTAGATCTCAAAAAGTCTGATTTGCCTATTATTTTAGCGGCACCAACAGGACGGGCTGCTCGTCGGATGAACGAACTC
ACCCAACTCCCTAGCGCCACTATCCATAGACATTTGGGCCTCAATAGCGAGGACGATTTCAAGACCTTGGAGGACTATCT
CGATTGCGACTTGATTATCATCGATGAGTTTTCTATGGTTGATACTTGGTTGGCTAATCAACTTTTTGAAAGTATCTCTG
ATTCAACCCAAGTCATCATTGTGGGTGACCAAGACCAACTGCCTTCCGTAGGCCCTGGCCAGGTCTTGGCTGACCTTTTG
CAGATTGATGACTTGCCTAAGGTTTCTCTGACCAAAATTTTCAGACAATCCGAGGACTCCACCATCGTTACCTTAGCTAG
CCAGATGCGCCAAGGTCAACTACCTGCTGATTTCACAGAGAAAAAGGCTGACCGCTCTTACTTTGAGGCCAATGCCAACC
ATATTCCACAGATGGTTCCTAAAATTGTCTCTGCCGCTATAAAGAGCGGGATTGCTGCTCAGGATGTGCAGATTTTAGCC
CCCATGTACCGAGGACAGGCTGGAATTAACAATCTCAATACCATTATGCAGGACCTACTTAATCCTCAAGAAAAGGCCAA
TCAGTTTGCCTTTAATGATATTTTCTTCCGTAAGAACGACAAAATTCTCCATCTGGTCAACGATACCGAACTCAATGTCT
TCAATGGCGATATCGGAATCATTACTGATCTCATCCCTGATAAATATACTGAAAGCAAGCAGGACGAAATTTACATGTCC
TTTGATGGCAATGAGGTTATCTATCCTCGTAACGAATGGAATAAGATTACTCTGGCCTATGCCATGTCAATCCACAAATC
TCAAGGGAGTGAGTTCCCAGTCGTTATCCTTCCCATCACACGACAAAGTGGACGTATGCTACAACGCAACCTCATCTACA
CCGCTATCACACGCGCCAAGAGTAAACTAGTCATGTTAGGGGAAATCGCAGCCTTTGATTATGCCGTTCGCAACGAGGGA
GCTAAACGAAATACTTATCTCATCCAACGTTTTGAACAAACTTATACACAAGCTGTTGATAAGTCTGTCGAAAAGATTGT
TAAAAACGAGGCAACAGAGGCACCCGATCAAACAAAAACGAAAAACAACGATCCCTCAGAAACCCTTGAAAACAAAGACT
TTTCGGAAAATATCAATCTATCCCAAGATCTTGTTAACACTTATTCACAACCTGTGGATAAGTCTGTTAACAAACCTGTG
CAAACAGAAGAAAACTATCGCTTAACTGAAGAAAATTGGGCAACTATAGATCCAATGATTGGGCTCAGTGAAGACGATAT
TGCTGCCTTTTTTAACAATAACTAA

Domains

Predicted by InterProScan.

• UvrD-like helicase C-terminal domain (UvrD_C_2) (659-705)

• Helix-hairpin-helix containing domain (HHH_RecD2) (147-237)

• AAA domain (AAA_30) (331-523)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (572-636)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD/recD2/recDB	Bacillus subtilis subsp. subtilis str. 168	45.067	89.928	0.405