Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutS/mutS2   Type   Machinery gene
Locus tag   V6U66_RS09410 Genome accession   NZ_CP145864
Coordinates   2016815..2019163 (+) Length   782 a.a.
NCBI ID   WP_045771668.1    Uniprot ID   -
Organism   Streptococcus salivarius strain KSS7     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2011815..2024163
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V6U66_RS09390 (V6U66_09370) - 2012491..2012616 (-) 126 WP_004183520.1 hypothetical protein -
  V6U66_RS09395 (V6U66_09375) - 2012818..2013027 (-) 210 WP_014632597.1 hypothetical protein -
  V6U66_RS09400 (V6U66_09380) - 2013048..2013449 (-) 402 WP_004183523.1 DUF6608 family protein -
  V6U66_RS09405 (V6U66_09385) polA 2014001..2016640 (-) 2640 WP_084871034.1 DNA polymerase I -
  V6U66_RS09410 (V6U66_09390) mutS/mutS2 2016815..2019163 (+) 2349 WP_045771668.1 endonuclease MutS2 Machinery gene
  V6U66_RS09415 (V6U66_09395) - 2019266..2019808 (-) 543 WP_045771669.1 CvpA family protein -
  V6U66_RS09420 (V6U66_09400) zapA 2019805..2020119 (-) 315 WP_004183554.1 cell division protein ZapA -
  V6U66_RS09425 (V6U66_09405) rnhC 2020435..2021325 (+) 891 WP_045771670.1 ribonuclease HIII -
  V6U66_RS09430 (V6U66_09410) lepB 2021344..2021994 (+) 651 WP_221739280.1 signal peptidase I -

Sequence

Protein


Download         Length: 782 a.a.        Molecular weight: 87615.92 Da        Isoelectric Point: 6.4810

>NTDB_id=853656 V6U66_RS09410 WP_045771668.1 2016815..2019163(+) (mutS/mutS2) [Streptococcus salivarius strain KSS7]
MNTKILDQLEFNKVKDQFTEYLQTEQAQAELRDLVPMTNSERIQNQFTEIQEMAEIFVEHHGFAIGSLRDISEPLRRLEL
DADLNIQELIAIKKVLQASADLGRFYADLENVELVALKRLFEKIEAFPSLQGSLQSINDGGFIEHFASPELQNIRRQLKS
CDDAIRQTLQDILKKSGHMLAESLIASRNGRSVLPVKNTYRNRIAGVVHDISSSGNTVYIEPRAVIQLNEEITQLRADER
HEMARILHELSDQLRPQAAAIANNAWILGHMDFIRGKYLYLQDKKAVIPKISDNQTLQLLNVRHPLLVNPVANDLRFDED
LTAIVITGPNTGGKTVMLKTLGLAQLMAQSGLPILADKGSRVAIFQEIFADIGDEQSIEQSLSTFSSHMTHIVEILDAAD
SNSLVLVDELGAGTDPQEGASLAMAILEHLRLSQIKTMATTHYPELKAYGIETQHVENASMEFDTATLSPTYRFMQGVPG
RSNAFEIARRLGLNEIIVKEAENLTDTDSDVNRIIEQLEAQTVETQKRLEHIKDVEQENLKFNRAVKKLYNEFSHEYDKE
LEKAQKEIQDMVDTALAESDSILKNLHDKSQLKPHEVIDAKGKLKKLAPQVDLSKNKVLRKAKKEKAARAPRIGDDIIVT
AYGQRGTLTSQAKNGNWEAQVGLIKMTLKADEFTLVRAQVEAQQPKKKQINVVKKAKKASGGPRARLDLRGKRYEEAMQE
LDAFIDQALLNNMSQVDIIHGIGTGVIRDAVTKYLRRHRHVKSFEYAPQSAGGSGCTIATLG

Nucleotide


Download         Length: 2349 bp        

>NTDB_id=853656 V6U66_RS09410 WP_045771668.1 2016815..2019163(+) (mutS/mutS2) [Streptococcus salivarius strain KSS7]
ATGAACACAAAGATTTTAGACCAATTAGAATTTAACAAGGTCAAGGACCAGTTCACAGAATACCTGCAGACTGAACAGGC
TCAGGCGGAGTTACGTGACTTGGTGCCTATGACCAATTCAGAAAGAATTCAAAATCAATTTACAGAAATTCAAGAAATGG
CTGAGATTTTCGTAGAGCACCATGGCTTTGCCATTGGTAGCTTGCGAGATATTTCTGAGCCCTTGCGTCGCTTGGAACTG
GATGCTGACCTCAACATTCAGGAGCTTATTGCCATCAAGAAAGTGCTACAAGCTTCAGCTGACCTTGGTCGCTTCTACGC
TGACCTTGAAAATGTTGAGCTCGTCGCTCTCAAACGTCTTTTCGAAAAGATTGAAGCCTTCCCAAGTCTACAAGGTAGCC
TTCAAAGTATCAATGACGGTGGTTTCATTGAGCATTTTGCTAGCCCTGAGTTGCAGAATATCCGTCGTCAACTCAAATCT
TGCGATGATGCTATTCGCCAGACCTTGCAAGACATTCTCAAGAAATCTGGTCACATGTTGGCTGAGAGTTTGATTGCTAG
CCGTAATGGTCGTTCAGTGCTGCCTGTCAAAAATACCTACCGTAACCGTATTGCTGGGGTTGTGCATGACATCTCAAGCT
CTGGAAACACAGTGTATATCGAGCCACGCGCCGTTATCCAACTTAACGAAGAAATTACACAATTACGTGCAGACGAACGT
CATGAGATGGCTCGTATCCTGCATGAATTGTCTGATCAACTCCGTCCACAAGCTGCTGCTATCGCTAACAACGCTTGGAT
TTTGGGCCACATGGACTTCATTCGAGGAAAATACCTCTATCTCCAAGATAAGAAGGCGGTTATCCCAAAGATTAGTGACA
ACCAAACACTCCAACTGCTTAACGTTCGTCACCCGCTCTTGGTCAATCCAGTGGCCAACGATTTGCGCTTTGATGAGGAC
CTCACAGCTATTGTCATCACCGGTCCCAATACCGGTGGTAAAACGGTCATGCTTAAAACTCTTGGATTAGCACAACTGAT
GGCTCAATCTGGCCTTCCAATTTTGGCTGATAAGGGCAGTCGTGTAGCCATTTTCCAAGAGATTTTTGCGGACATTGGAG
ATGAACAGTCTATCGAACAGAGTTTGTCAACATTCTCTAGTCACATGACCCACATTGTTGAGATTCTGGACGCTGCCGAC
AGCAACAGTCTTGTCTTGGTCGATGAGCTCGGGGCTGGTACCGACCCTCAGGAAGGGGCTAGTCTAGCCATGGCAATCCT
AGAGCACCTCCGTTTGAGTCAGATTAAGACCATGGCTACTACTCACTATCCTGAGCTTAAGGCCTATGGGATTGAGACGC
AACATGTGGAAAATGCCAGCATGGAGTTTGACACAGCGACTTTAAGCCCTACCTATCGTTTTATGCAGGGAGTTCCTGGT
CGCTCTAACGCCTTTGAGATTGCTCGCCGCCTCGGTTTGAATGAAATTATTGTCAAAGAGGCAGAAAACCTCACGGATAC
TGATAGTGATGTCAACCGTATCATCGAGCAACTTGAAGCCCAAACTGTGGAAACACAAAAACGTCTGGAACACATCAAGG
ACGTTGAGCAAGAGAACCTTAAATTCAACCGTGCGGTCAAGAAACTCTATAACGAATTCTCCCATGAGTACGACAAGGAA
CTCGAAAAGGCTCAAAAAGAAATTCAGGATATGGTGGATACAGCTTTGGCTGAGAGCGATAGTATTCTCAAAAATCTCCA
CGATAAGAGTCAACTCAAACCTCATGAAGTTATTGACGCCAAAGGAAAACTCAAGAAACTTGCCCCACAAGTGGACCTCT
CTAAGAATAAGGTTCTTCGTAAGGCCAAGAAAGAAAAGGCTGCGCGTGCCCCTCGTATCGGAGATGATATCATTGTTACC
GCCTATGGTCAACGTGGTACGCTTACCAGTCAAGCCAAAAATGGTAACTGGGAAGCCCAGGTAGGTCTCATCAAGATGAC
ACTCAAGGCGGATGAATTCACTCTTGTTCGTGCCCAAGTGGAAGCCCAACAACCTAAGAAGAAACAAATTAACGTGGTTA
AAAAAGCCAAAAAGGCATCTGGCGGTCCTCGTGCCCGTCTGGACCTTCGTGGGAAACGTTACGAAGAAGCTATGCAAGAG
CTTGATGCCTTTATTGACCAAGCCCTACTTAATAACATGAGTCAGGTGGACATCATCCACGGTATTGGTACAGGTGTCAT
CCGTGATGCTGTTACCAAATATCTCCGCCGTCATCGCCATGTTAAAAGTTTTGAATATGCCCCACAAAGTGCCGGTGGTT
CCGGATGTACCATTGCAACCTTAGGGTAA

Domains

Predicted by InterProScan.

MutS2 and Smr-associated SH3 domain (MSSS)

(633-672)

MutS domain V (MutS_V)

(324-505)

Smr domain (Smr)

(707-781)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutS/mutS2 Bacillus subtilis subsp. subtilis str. 168

39.344

100

0.399