Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutS/mutS2   Type   Machinery gene
Locus tag   V6U65_RS08730 Genome accession   NZ_CP145863
Coordinates   1913370..1915718 (+) Length   782 a.a.
NCBI ID   WP_410532377.1    Uniprot ID   -
Organism   Streptococcus salivarius strain KSS6     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1908370..1920718
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V6U65_RS08715 (V6U65_08710) tnpA 1908436..1908900 (+) 465 WP_410532374.1 IS200/IS605 family transposase -
  V6U65_RS08720 (V6U65_08715) - 1909042..1910139 (-) 1098 WP_410532375.1 DUF6287 domain-containing protein -
  V6U65_RS08725 (V6U65_08720) polA 1910556..1913195 (-) 2640 WP_410532376.1 DNA polymerase I -
  V6U65_RS08730 (V6U65_08725) mutS/mutS2 1913370..1915718 (+) 2349 WP_410532377.1 endonuclease MutS2 Machinery gene
  V6U65_RS08735 (V6U65_08730) - 1915821..1916363 (-) 543 WP_002884677.1 CvpA family protein -
  V6U65_RS08740 (V6U65_08735) zapA 1916360..1916674 (-) 315 WP_004183554.1 cell division protein ZapA -
  V6U65_RS08745 (V6U65_08740) rnhC 1916991..1917881 (+) 891 WP_410532378.1 ribonuclease HIII -
  V6U65_RS08750 (V6U65_08745) lepB 1917900..1918541 (+) 642 WP_104021369.1 signal peptidase I -

Sequence

Protein


Download         Length: 782 a.a.        Molecular weight: 87634.88 Da        Isoelectric Point: 6.5523

>NTDB_id=853537 V6U65_RS08730 WP_410532377.1 1913370..1915718(+) (mutS/mutS2) [Streptococcus salivarius strain KSS6]
MNTKILDQLEFNKVKDQFTEYLQTEQAQAELRDLVPMTNPERIQNQFTEIQEMSEIFVEHHGFAIGSLRDISEPLRRLEL
DADLNIQELIAIKKVLQASADLGRFYADLENVELIALKRLFEKIEAFPSLQGSLQSINDGGFIEHFASPELQNIRRQLKS
CDDAIRQTLQDILKKSGHMLAESLIASRNGRSVLPVKNTYRNRIAGVVHDISSSGNTVYIEPRAVIQLNEEITQLRADER
HEMARILHELSDQLRPQAAAIANNAWILGHMDFIRGKYLYLHDKKAVIPKISDNQTLQLLNVRHPLLVNPVANDLHFDED
LTAIVITGPNTGGKTVMLKTLGLAQLMAQSGLPILADKGSRVAIFQEIFADIGDEQSIEQSLSTFSSHMTHIVEILNAAD
SNSLVLVDELGAGTDPQEGASLAMAILEHLRLSQIKTMATTHYPELKAYGIETQHVENASMEFDTATLSPTYRFMQGVPG
RSNAFEIARRLGLNEIIVKEAENLTDTDSDVNRIIEQLEAQTVETQKRLEHIKDVEQENLKFNRAVKKLYNEFSHEYDKE
LEKAQKEIQDMVDTALAESDSILKNLHDKSQLKPHEVIDAKGKLKKLSPQVDLSKNKVLRKAKKEKAARAPRVGDDIIVT
AYGQRGTLTSQAKNGNWEAQVGLIKMTLKADEFTLVRAQAEAQQPKKKQINVVKKAKKSSGGPRARLDLRGKRYEEAMQE
LDAFIDQALLNNMSQVDIIHGIGTGVIRDAVTKYLRRHRHVKSFEYAPQSAGGSGCTIATLG

Nucleotide


Download         Length: 2349 bp        

>NTDB_id=853537 V6U65_RS08730 WP_410532377.1 1913370..1915718(+) (mutS/mutS2) [Streptococcus salivarius strain KSS6]
ATGAACACAAAGATTTTAGACCAATTAGAATTTAACAAGGTCAAGGACCAGTTCACAGAATACCTGCAGACTGAACAGGC
TCAGGCGGAGTTGCGTGACTTGGTGCCTATGACCAATCCAGAAAGAATTCAAAATCAATTTACAGAAATCCAAGAAATGT
CTGAGATTTTCGTAGAGCACCATGGCTTTGCCATTGGTAGCCTGAGAGATATTTCTGAGCCCTTACGTCGCTTGGAACTG
GATGCTGATCTCAATATCCAGGAGCTCATTGCCATCAAGAAGGTGCTGCAAGCTTCGGCTGACCTTGGTCGCTTCTACGC
TGACCTTGAAAATGTAGAGCTCATCGCCCTTAAACGTCTTTTCGAAAAGATTGAAGCCTTCCCAAGTCTCCAAGGTAGCC
TTCAAAGTATCAATGATGGTGGTTTTATTGAGCATTTTGCTAGCCCTGAGTTGCAAAATATTCGTCGTCAACTTAAATCT
TGTGATGATGCCATTCGCCAGACCTTGCAAGACATTCTCAAGAAATCTGGCCACATGTTGGCTGAAAGTTTGATTGCTAG
TCGTAACGGTCGTTCGGTGCTTCCTGTCAAAAATACCTACCGTAACCGTATTGCTGGGGTTGTGCATGACATCTCAAGCT
CTGGAAACACAGTATATATCGAGCCACGTGCCGTTATCCAGCTCAACGAAGAAATTACACAATTACGTGCAGACGAACGC
CACGAGATGGCTCGTATCCTGCATGAACTGTCTGATCAACTGCGTCCACAGGCTGCTGCAATTGCCAACAACGCTTGGAT
TTTGGGCCACATGGACTTCATTCGAGGAAAATACCTCTATCTCCATGATAAAAAAGCGGTTATTCCAAAGATTAGTGACA
ATCAAACACTACAACTACTTAACGTTCGTCACCCTCTTTTGGTCAATCCTGTAGCTAACGATTTGCACTTTGATGAGGAC
CTTACGGCCATTGTCATCACAGGTCCCAATACTGGTGGTAAGACCGTCATGCTTAAAACGCTAGGACTAGCACAACTAAT
GGCTCAATCTGGTCTGCCAATTTTGGCTGATAAGGGCAGCCGTGTAGCCATTTTCCAAGAGATTTTTGCGGATATCGGAG
ATGAACAGTCTATCGAACAGAGTTTGTCAACATTCTCTAGTCACATGACCCACATTGTTGAGATTCTGAATGCTGCCGAC
AGTAACAGTCTGGTCTTGGTCGATGAGCTTGGGGCTGGTACCGACCCTCAGGAAGGAGCTAGTCTAGCCATGGCAATCTT
AGAGCACCTCCGTTTAAGTCAGATTAAGACCATGGCTACCACTCACTATCCTGAGCTTAAGGCCTATGGGATTGAGACGC
AACATGTGGAAAATGCCAGCATGGAGTTTGACACAGCGACTTTAAGCCCTACCTATCGTTTTATGCAAGGGGTTCCTGGT
CGTTCTAATGCCTTTGAAATTGCTCGCCGCCTCGGTTTGAATGAGATTATTGTCAAGGAAGCAGAAAACCTCACGGATAC
TGATAGTGATGTCAACCGTATCATCGAGCAACTTGAAGCCCAAACTGTGGAAACACAAAAACGTCTGGAACACATCAAGG
ACGTTGAGCAAGAAAACCTTAAATTCAACCGTGCGGTCAAGAAACTCTATAACGAATTCTCCCATGAGTACGACAAGGAA
CTCGAAAAGGCTCAGAAAGAAATTCAAGATATGGTGGATACAGCTTTGGCTGAGAGCGATAGTATTCTCAAAAATCTCCA
CGATAAGAGTCAACTCAAGCCTCACGAAGTTATCGACGCCAAAGGAAAACTCAAGAAACTTTCCCCACAAGTGGACCTCT
CTAAGAATAAGGTCCTTCGTAAGGCCAAGAAAGAAAAGGCTGCGCGTGCCCCTCGTGTCGGAGATGATATCATCGTTACC
GCCTATGGTCAACGTGGTACGCTTACCAGTCAAGCCAAAAATGGTAACTGGGAAGCCCAGGTAGGTCTCATCAAGATGAC
ACTCAAGGCGGATGAATTCACTCTCGTTCGTGCCCAAGCGGAAGCTCAACAACCTAAGAAGAAACAGATTAACGTGGTTA
AAAAAGCCAAAAAGTCATCTGGCGGTCCTCGTGCCCGTCTAGACCTTCGTGGGAAACGTTACGAAGAAGCCATGCAAGAG
CTTGATGCCTTTATTGACCAAGCCCTACTTAATAACATGAGTCAGGTGGACATCATCCACGGTATTGGTACAGGTGTCAT
CCGTGATGCTGTTACCAAATATCTCCGCCGTCATCGCCATGTTAAAAGTTTTGAATATGCCCCACAAAGTGCCGGTGGTT
CCGGATGTACCATTGCAACCTTAGGGTAA

Domains

Predicted by InterProScan.

MutS domain V (MutS_V)

(324-505)

MutS2 and Smr-associated SH3 domain (MSSS)

(633-672)

Smr domain (Smr)

(707-781)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutS/mutS2 Bacillus subtilis subsp. subtilis str. 168

39.47

100

0.4