Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutS/mutS2   Type   Machinery gene
Locus tag   V6U64_RS01385 Genome accession   NZ_CP145862
Coordinates   248469..250817 (-) Length   782 a.a.
NCBI ID   WP_410536761.1    Uniprot ID   -
Organism   Streptococcus salivarius strain KSS4     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 243469..255817
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V6U64_RS01365 (V6U64_01365) lepB 245664..246287 (-) 624 WP_060971708.1 signal peptidase I -
  V6U64_RS01370 (V6U64_01370) rnhC 246306..247196 (-) 891 WP_410536757.1 ribonuclease HIII -
  V6U64_RS01375 (V6U64_01375) zapA 247513..247827 (+) 315 WP_004183554.1 cell division protein ZapA -
  V6U64_RS01380 (V6U64_01380) - 247824..248366 (+) 543 WP_410536759.1 CvpA family protein -
  V6U64_RS01385 (V6U64_01385) mutS/mutS2 248469..250817 (-) 2349 WP_410536761.1 endonuclease MutS2 Machinery gene
  V6U64_RS01390 (V6U64_01390) polA 250992..253631 (+) 2640 WP_014635052.1 DNA polymerase I -
  V6U64_RS01395 (V6U64_01395) - 254185..254586 (+) 402 WP_004183523.1 DUF6608 family protein -
  V6U64_RS01400 (V6U64_01400) - 254607..254867 (+) 261 WP_002884687.1 hypothetical protein -

Sequence

Protein


Download         Length: 782 a.a.        Molecular weight: 87650.88 Da        Isoelectric Point: 6.5182

>NTDB_id=853353 V6U64_RS01385 WP_410536761.1 248469..250817(-) (mutS/mutS2) [Streptococcus salivarius strain KSS4]
MNTKILDQLEFNKVKDQFTEYLQTEQAQAELRDLVPMTNPERIQNQFTEIQEMAEIFVEHHGFAIGSLRDISEPLRRLEL
DADLNIQELIAIKKVLQASADLGRFYADLENVELVALKRLFEKIEAFPSLQGSLQSINDGGFIEHFASPELQNIRRQLKS
CDDAIRQTLQDILKKSGHMLAESLIANRNGRSVLPVKNTYRNRIAGVVHDISSSGNTVYIEPRAVIQLNEEITQLRADER
HEMARILHELSDQLRPQAAAIANNAWILGHMDFIRGKYLYLQDKKAVIPKISDNQTLQLHNVRHPLLVNPVANDLRFDED
LTAIVITGPNTGGKTVMLKTLGLAQLMAQSGLPILADKGSRVAIFQEIFADIGDEQSIEQSLSTFSSHMTHIVEILDAAD
SNSLVLVDELGAGTDPQEGASLAMAILEHLRLSQIKTMATTHYPELKAYGIETQHVENASMEFDTATLSPTYRFMQGVPG
RSNAFEIARRLGLNEIIVKEAENLTDTDSDVNRIIEQLEAQTVETQKRLEHIKDVEQENLKFNRAVKKLYNEFSHEYDKE
LEKAQKEIQDMVDTALAESDSILKNLHDKSQLKPHEVIDAKGKLKKLSPQVDLSKNKVLRKAKKEKAARAPRVGDDIIVT
AYGQRGTLTSQAKNGNWEAQVGLIKMTLKADEFTLVRAQAEAQQPKKKQINVVKKAKKASGGPRARLDLRGKRYEEAMQE
LDAFIDQALLNNMSQVDIIHGIGTGVIRDAVTKYLRRHRHVKSFEYAPQSAGGSGCTIATLG

Nucleotide


Download         Length: 2349 bp        

>NTDB_id=853353 V6U64_RS01385 WP_410536761.1 248469..250817(-) (mutS/mutS2) [Streptococcus salivarius strain KSS4]
ATGAACACAAAGATTTTAGACCAATTAGAATTTAACAAGGTCAAGGACCAGTTCACAGAATACCTGCAGACTGAACAGGC
ACAGGCGGAGTTACGTGACTTGGTACCTATGACCAATCCAGAAAGAATTCAAAATCAATTTACAGAAATTCAAGAAATGG
CAGAGATTTTCGTAGAACACCATGGCTTTGCCATTGGTAGCTTGCGAGATATTTCTGAACCCTTGCGTCGCTTGGAACTG
GATGCTGACCTCAACATCCAGGAGCTGATTGCTATCAAGAAGGTGCTGCAAGCTTCAGCTGACCTTGGTCGCTTCTACGC
TGACCTTGAAAATGTTGAGCTCGTCGCTCTTAAACGTCTTTTCGAAAAGATTGAAGCCTTCCCAAGTCTACAAGGCAGTC
TTCAAAGCATCAATGACGGTGGTTTCATTGAGCATTTTGCTAGCCCAGAGTTGCAAAATATCCGTCGTCAACTTAAATCT
TGTGATGATGCCATTCGCCAGACCTTGCAAGACATTCTCAAGAAATCTGGTCACATGTTGGCTGAGAGTTTGATTGCTAA
TCGTAATGGTCGTTCAGTGCTTCCTGTCAAAAATACCTACCGTAACCGTATTGCTGGGGTTGTGCATGACATCTCAAGCT
CTGGAAACACAGTGTATATCGAGCCACGCGCCGTTATACAGCTTAACGAAGAAATTACACAATTACGTGCAGACGAACGT
CATGAGATGGCTCGTATCCTGCATGAATTGTCTGATCAACTCCGTCCACAAGCTGCTGCTATCGCTAACAACGCTTGGAT
TTTGGGTCACATGGACTTTATTCGAGGAAAATACCTCTATCTCCAGGATAAAAAGGCGGTTATCCCAAAGATTAGTGACA
ACCAAACACTCCAACTCCATAACGTTCGTCACCCTCTTTTGGTCAATCCAGTAGCCAACGATTTACGCTTTGATGAGGAC
CTCACAGCCATTGTCATTACAGGTCCCAATACCGGTGGTAAAACGGTCATGCTTAAAACTCTTGGATTAGCACAACTGAT
GGCTCAATCTGGTCTTCCAATTTTGGCTGATAAGGGCAGTCGTGTAGCCATTTTCCAAGAGATTTTTGCGGACATCGGAG
ATGAACAGTCTATCGAACAGAGTTTGTCAACTTTCTCTAGTCACATGACCCACATTGTCGAGATTCTGGACGCTGCCGAC
AGCAACAGTCTTGTCTTAGTCGATGAGCTTGGGGCTGGTACTGACCCTCAGGAAGGGGCTAGTCTAGCCATGGCAATCCT
AGAGCACCTCCGTTTGAGCCAAATTAAGACCATGGCTACTACTCACTATCCTGAGCTTAAGGCCTATGGGATTGAGACGC
AACATGTAGAAAATGCCAGCATGGAGTTTGACACAGCGACTTTAAGTCCTACCTATCGTTTTATGCAGGGGGTCCCTGGT
CGTTCTAATGCCTTTGAGATTGCTCGCCGCCTCGGTTTGAATGAGATTATTGTCAAGGAAGCAGAAAACCTCACGGATAC
TGATAGTGATGTCAACCGTATCATCGAGCAACTTGAAGCCCAAACTGTGGAAACACAAAAACGTCTGGAACACATCAAGG
ACGTTGAGCAAGAAAACCTTAAATTCAACCGTGCGGTCAAGAAACTCTATAACGAATTCTCCCATGAGTACGACAAGGAA
CTCGAAAAGGCTCAGAAAGAAATTCAAGATATGGTGGATACAGCTTTGGCTGAGAGCGATAGTATTCTCAAAAATCTCCA
CGATAAGAGTCAACTCAAGCCTCACGAAGTTATCGACGCCAAAGGAAAACTCAAGAAACTTTCCCCACAAGTGGACCTCT
CTAAGAATAAGGTCCTTCGTAAGGCCAAGAAAGAAAAGGCTGCGCGTGCCCCTCGTGTCGGAGATGATATCATCGTTACC
GCCTATGGTCAACGTGGTACGCTTACCAGTCAAGCCAAAAATGGTAACTGGGAAGCCCAGGTAGGTCTCATCAAGATGAC
ACTCAAGGCGGATGAATTCACTCTCGTTCGTGCCCAAGCGGAAGCCCAACAACCTAAGAAGAAACAGATTAACGTGGTTA
AAAAAGCCAAGAAGGCATCTGGCGGTCCTCGTGCCCGTCTAGACCTTCGTGGGAAACGTTACGAAGAAGCTATGCAAGAG
CTTGATGCCTTTATTGACCAAGCCCTACTTAATAACATGAGTCAGGTGGACATCATCCACGGTATTGGTACAGGTGTCAT
CCGTGATGCTGTTACCAAATATCTCCGCCGTCATCGCCATGTTAAAAGTTTTGAATATGCCCCACAAAGTGCTGGTGGTT
CCGGATGTACCATTGCAACCTTAGGATAA

Domains

Predicted by InterProScan.

MutS domain V (MutS_V)

(324-505)

MutS2 and Smr-associated SH3 domain (MSSS)

(633-672)

Smr domain (Smr)

(707-781)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutS/mutS2 Bacillus subtilis subsp. subtilis str. 168

39.344

100

0.399