Detailed information NTG0853313

Bioinformatically predicted

Overview

• Name: recD/recD2/recDB
• Type: Machinery gene
• Locus tag: V6U63_RS08735
• Genome accession: NZ_CP145861
• Coordinates: 1909010..1911514 (+)
• Length: 834 a.a.
• NCBI ID: WP_371595911.1
• Uniprot ID: -
• Organism: Streptococcus salivarius strain KSS3
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1904010..1916514

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V6U63_RS08715 (V6U63_08700)	-	1906220..1906762 (-)	543	WP_002884677.1	CvpA family protein	-
V6U63_RS08720 (V6U63_08705)	zapA	1906759..1907073 (-)	315	WP_004183554.1	cell division protein ZapA	-
V6U63_RS08725 (V6U63_08710)	rnhC	1907390..1908280 (+)	891	WP_037611250.1	ribonuclease HIII	-
V6U63_RS08730 (V6U63_08715)	lepB	1908299..1908949 (+)	651	WP_037611251.1	signal peptidase I	-
V6U63_RS08735 (V6U63_08720)	recD/recD2/recDB	1909010..1911514 (+)	2505	WP_371595911.1	ATP-dependent RecD-like DNA helicase	Machinery gene
V6U63_RS08740 (V6U63_08725)	-	1911566..1911892 (-)	327	WP_002884560.1	AzlD domain-containing protein	-
V6U63_RS08745 (V6U63_08730)	-	1911879..1912571 (-)	693	WP_002884750.1	AzlC family ABC transporter permease	-
V6U63_RS08750 (V6U63_08735)	tsaD	1912623..1913636 (-)	1014	WP_002884621.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	-
V6U63_RS08755 (V6U63_08740)	rimI	1913636..1914091 (-)	456	WP_037602742.1	ribosomal protein S18-alanine N-acetyltransferase	-
V6U63_RS08760 (V6U63_08745)	tsaB	1914051..1914737 (-)	687	WP_037602740.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	-
V6U63_RS08765 (V6U63_08750)	-	1914998..1915228 (+)	231	WP_002884752.1	DNA-dependent RNA polymerase subunit epsilon	-

Sequence

Protein

• Length: 834 a.a.
• Molecular weight: 94039.31 Da
• Isoelectric Point: 4.4448

>NTDB_id=853313 V6U63_RS08735 WP_371595911.1 1909010..1911514(+) (recD/recD2/recDB) [Streptococcus salivarius strain KSS3]
MQEFYFSGTIERVIFENASNFFRILLLEIDETDSDFEDYEIIVTGTMGDVMEGEDYTFWGQLTNHPKYGEQLQMTRYERS
KPSASGLIKYFASDNFKGIGKKTAERIVEIYGEDPIDKILEDPSKLEQIPNLSKVNREAFVAKLKINYGTEQILSKLSSY
GLTPKAASQIFNQYKEESLNLIEEHPYLLVEEVQGIGFKIADQLAERLGIASDAPERLRAALIHCLLETSMEEGDTYIEA
KALLERTIILLESARQIELDPALVAKELTNLIQEDKVQNIETKIFDNTLYFAEQGIYTHLTRIMKDQPDISAEDKIQASL
EEVEEELGITYDKVQKDAIIKALQSKVFILTGGPGTGKTTVINGIIKTYADLHGLDLKKSDLPIILAAPTGRAARRMNEL
TQLPSATIHRHLGLNSEDDFKTLEDYLDCDLIIIDEFSMVDTWLANQLFESISDSTQVVIVGDQDQLPSVGPGQVLADLL
QIDDLPKVSLTKIFRQSEDSTIVTLASQMRQGQLPADFTEKKADRSYFEANVNHIPQMVPKIVSAAIKSGIAAQDVQILA
PMYRGQAGINNLNTIMQDLLNPQEKANQFAFNDIFFRKNDKILHLVNDTELNVFNGDIGIITDLIPGKYTESKQDEIYMS
FDGNEVIYPRNEWNKITLAYAMSIHKSQGSEFPVVILPITRQSGRMLQRNLIYTAITRAKSKLVMLGEIAAFDYAVHNEG
AKRNTYLIQRFEQTYTQAVDKSVEKIVKNEATGASNQTKTKNNDPSETLENKDFSENINPSPDFVNTYSQPVDKSVNKPV
QTEENYRLTEENWTTIDPMIGLSEDDIAAFFNNN

Nucleotide

• Length: 2505 bp

>NTDB_id=853313 V6U63_RS08735 WP_371595911.1 1909010..1911514(+) (recD/recD2/recDB) [Streptococcus salivarius strain KSS3]
ATGCAAGAATTTTATTTTTCAGGAACTATCGAACGCGTCATTTTCGAAAACGCTAGTAATTTTTTCCGTATTCTACTCTT
AGAAATTGACGAAACAGACAGTGATTTTGAGGACTATGAAATCATTGTTACAGGAACCATGGGAGATGTCATGGAAGGTG
AAGATTATACCTTCTGGGGTCAGCTAACCAATCATCCCAAATATGGTGAACAACTCCAAATGACGCGCTACGAACGGTCA
AAACCTTCTGCTAGCGGTCTTATCAAGTATTTCGCCAGCGACAATTTTAAGGGGATTGGTAAGAAAACAGCTGAGCGTAT
TGTCGAGATTTATGGTGAAGACCCTATTGACAAGATTCTCGAGGATCCGAGCAAATTAGAACAGATTCCTAATCTGTCCA
AGGTCAATCGAGAAGCCTTCGTTGCAAAGTTAAAAATCAACTATGGAACCGAGCAAATCTTGTCCAAACTTTCCAGCTAT
GGACTCACACCAAAAGCTGCCTCACAAATTTTCAACCAATATAAGGAAGAATCGCTCAACCTTATCGAGGAACACCCTTA
TCTCTTGGTAGAGGAAGTTCAAGGAATCGGATTTAAAATAGCCGACCAACTAGCCGAACGCTTAGGGATTGCTAGTGATG
CTCCTGAGCGTTTACGAGCTGCCTTGATTCATTGTCTGCTAGAAACTAGCATGGAAGAAGGCGACACCTATATCGAAGCC
AAAGCCTTGCTTGAACGAACTATCATCCTTTTGGAAAGTGCTCGTCAGATTGAACTTGACCCCGCCTTAGTCGCGAAGGA
ATTAACCAATCTCATCCAAGAGGATAAAGTGCAAAATATAGAGACTAAAATCTTTGATAATACCCTATATTTTGCGGAAC
AGGGCATCTATACCCACCTAACTCGTATCATGAAAGACCAACCTGACATCAGTGCAGAGGACAAAATCCAAGCAAGTCTT
GAAGAGGTGGAAGAGGAGCTTGGTATTACTTATGATAAGGTTCAAAAAGATGCCATTATCAAAGCCCTACAAAGCAAGGT
CTTCATCCTGACAGGTGGTCCCGGGACAGGTAAAACCACCGTTATTAACGGAATCATTAAAACTTATGCCGACCTTCATG
GTCTAGATCTCAAAAAGTCTGATTTGCCTATTATTTTAGCGGCACCAACAGGACGGGCTGCTCGTCGAATGAACGAACTC
ACCCAACTCCCTAGTGCCACTATCCATAGACATTTGGGACTCAATAGCGAGGACGATTTCAAGACCTTAGAGGACTATCT
CGATTGCGACTTGATTATCATCGATGAGTTTTCTATGGTTGATACTTGGTTGGCCAATCAACTCTTTGAAAGTATCTCTG
ATTCAACCCAAGTCGTCATTGTGGGTGACCAAGACCAACTGCCTTCCGTAGGCCCTGGCCAGGTCTTGGCTGACCTTTTG
CAGATTGATGACTTGCCTAAGGTTTCTCTGACCAAAATTTTCAGACAATCTGAGGACTCCACCATCGTTACCCTAGCTAG
TCAGATGCGTCAAGGCCAACTACCCGCTGATTTCACAGAGAAAAAGGCTGACCGCTCTTACTTTGAGGCCAATGTCAACC
ATATTCCACAGATGGTCCCTAAAATTGTCTCTGCCGCTATAAAGAGCGGGATTGCTGCTCAGGATGTGCAGATTCTAGCT
CCCATGTATCGAGGACAGGCTGGTATTAACAATCTCAATACTATTATGCAGGACCTACTTAATCCTCAAGAAAAGGCCAA
TCAATTTGCCTTTAATGACATTTTCTTCCGTAAGAACGACAAGATTCTCCATCTGGTCAACGATACTGAACTCAATGTCT
TCAATGGCGACATCGGCATCATTACTGATCTCATCCCTGGTAAATATACTGAAAGCAAGCAGGACGAAATTTACATGTCC
TTTGATGGCAATGAGGTTATCTATCCTCGTAACGAATGGAATAAGATTACTCTGGCCTATGCCATGTCAATCCACAAATC
CCAAGGGAGTGAGTTTCCAGTCGTTATCCTTCCCATCACACGCCAAAGTGGACGTATGCTACAACGTAACCTCATCTACA
CTGCTATCACACGCGCCAAGAGTAAGCTAGTCATGTTAGGGGAAATCGCAGCCTTTGATTATGCTGTTCACAACGAGGGG
GCTAAACGAAATACTTATCTCATCCAACGTTTTGAACAAACTTATACACAAGCTGTTGATAAGTCTGTCGAAAAGATTGT
TAAAAACGAGGCAACAGGCGCCTCCAATCAAACAAAAACGAAAAACAACGACCCCTCAGAAACCCTTGAAAACAAAGACT
TTTCGGAAAATATCAATCCATCCCCAGATTTTGTTAACACTTATTCACAACCTGTGGATAAGTCTGTTAACAAACCTGTG
CAAACAGAAGAAAACTATCGTTTAACTGAAGAAAATTGGACAACTATAGATCCAATGATTGGGCTCAGTGAAGACGATAT
TGCTGCCTTTTTTAACAATAACTAA

Domains

Predicted by InterProScan.

• UvrD-like helicase C-terminal domain (UvrD_C_2) (659-705)

• AAA domain (AAA_30) (331-523)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (572-638)

• Helix-hairpin-helix containing domain (HHH_RecD2) (147-237)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD/recD2/recDB	Bacillus subtilis subsp. subtilis str. 168	45.2	89.928	0.406