Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   V6T26_RS07455 Genome accession   NZ_CP145858
Coordinates   1614741..1616528 (-) Length   595 a.a.
NCBI ID   WP_410541167.1    Uniprot ID   -
Organism   Streptococcus salivarius strain KSS11     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1609741..1621528
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V6T26_RS07425 (V6T26_07425) - 1609842..1610612 (-) 771 WP_410541164.1 nucleoside phosphorylase -
  V6T26_RS07430 (V6T26_07430) - 1610691..1611185 (-) 495 WP_410541165.1 DUF6773 family protein -
  V6T26_RS07435 (V6T26_07435) - 1611199..1611396 (-) 198 WP_014621323.1 helix-turn-helix transcriptional regulator -
  V6T26_RS07440 (V6T26_07440) - 1611575..1612558 (-) 984 WP_410541166.1 rhodanese-related sulfurtransferase -
  V6T26_RS07445 (V6T26_07445) - 1612748..1613449 (-) 702 WP_060971296.1 glucosamine-6-phosphate deaminase -
  V6T26_RS07450 (V6T26_07450) queA 1613601..1614644 (+) 1044 WP_107372702.1 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA -
  V6T26_RS07455 (V6T26_07455) rcrQ 1614741..1616528 (-) 1788 WP_410541167.1 ABC transporter ATP-binding protein Regulator
  V6T26_RS07460 (V6T26_07460) rcrP 1616541..1618277 (-) 1737 WP_037599682.1 ABC transporter ATP-binding protein Regulator
  V6T26_RS07465 (V6T26_07465) - 1618494..1619225 (-) 732 WP_310591108.1 LysR family transcriptional regulator substrate-binding protein -
  V6T26_RS07470 (V6T26_07470) - 1619262..1619387 (-) 126 Protein_1457 LysR family transcriptional regulator -
  V6T26_RS07475 (V6T26_07475) - 1619397..1620950 (-) 1554 WP_410541168.1 BCCT family transporter -

Sequence

Protein


Download         Length: 595 a.a.        Molecular weight: 66476.66 Da        Isoelectric Point: 5.2508

>NTDB_id=853081 V6T26_RS07455 WP_410541167.1 1614741..1616528(-) (rcrQ) [Streptococcus salivarius strain KSS11]
MKKNKMKISHSSSFGRLWSYLQAYRFPLYLAIFLKIVSVIMSVLEPVVIGLAITELTKNTLAIIKGVEGAHINVSYVGLV
LVVYLLRGLIYELAAYYSNYFMTNAVQATVQDMRNEMTEKINRTSVSYFDKHQFGDLLGRFTSDVETVSNALQQSFLQVV
NAVFTLALVIGTVLYLNLQLGAIVVITIPITFFGARYIMSKSQPYFKQQADALGTLNGFVQENLTGFNVLKLFGREDRSL
DDFKEITEDLQKVGFKANFISGLMMPVLNGLSDLTYLIVAVLGGLQVLAGRLTIGNMQAFVQYVWQINQPIQNLTQLAGQ
LQSAKSSLDRIFQLMDEPDEANDATEVLEGDLTGQVSFKHVDFQYVADKPLIRDFNLEVNPGEMVAIVGPTGAGKSTIIN
LLMRFYDVTAGSISVDGHDIRNLSRQDYRKQFGMVLQDAWLFEGTIKENLRFGNLEATDEEIVEAAKAANVDHFIRTLPG
GYNMEMNQESSNISLGQKQLLTIARALLADPKILILDEATSSVDTRLELLIQKAMKTLMQGRTSFVIAHRLSTIQEADKI
LVLKDGQIIEQGNHESLLADKGFYYDLYNSQFAEK

Nucleotide


Download         Length: 1788 bp        

>NTDB_id=853081 V6T26_RS07455 WP_410541167.1 1614741..1616528(-) (rcrQ) [Streptococcus salivarius strain KSS11]
ATGAAGAAAAATAAAATGAAAATAAGTCATTCCTCAAGTTTTGGCCGCCTTTGGTCCTACTTGCAGGCTTATCGTTTCCC
ACTTTACCTAGCTATTTTCCTGAAAATTGTTAGTGTTATCATGAGTGTCCTTGAGCCAGTGGTCATTGGTTTAGCTATTA
CCGAGTTGACTAAAAATACGCTGGCCATCATCAAAGGTGTGGAAGGCGCTCATATCAACGTATCATATGTTGGTTTAGTT
TTGGTTGTTTATCTCTTGCGTGGTCTTATTTATGAGTTGGCTGCCTACTATTCCAACTATTTTATGACCAATGCTGTGCA
AGCAACGGTTCAAGATATGCGAAATGAGATGACTGAGAAAATCAATCGTACCTCAGTGTCATACTTTGATAAGCACCAGT
TTGGGGATCTCTTGGGACGCTTTACCAGTGACGTCGAGACAGTATCTAATGCCTTGCAGCAGTCATTCTTACAGGTTGTT
AATGCCGTCTTTACTCTAGCCTTGGTTATTGGAACAGTGCTTTACCTTAATCTTCAATTGGGAGCTATAGTTGTCATCAC
TATTCCGATTACTTTCTTTGGAGCCCGCTATATCATGAGTAAGTCTCAGCCCTACTTTAAACAACAAGCTGATGCCCTAG
GTACTCTTAATGGTTTTGTTCAGGAAAATCTGACTGGCTTCAATGTGCTTAAGCTATTTGGCCGTGAGGATAGATCCTTG
GACGATTTTAAAGAAATCACGGAAGACCTTCAGAAGGTAGGCTTTAAGGCTAATTTCATTTCAGGACTCATGATGCCGGT
TCTTAACGGTTTATCTGACTTGACCTATCTAATTGTCGCTGTTCTAGGTGGTTTGCAAGTTTTGGCTGGTCGCCTAACGA
TTGGTAATATGCAGGCCTTTGTTCAGTACGTTTGGCAGATTAATCAACCTATTCAGAACTTGACTCAGTTGGCTGGACAA
TTGCAAAGTGCTAAATCTTCTTTAGACCGTATTTTCCAACTGATGGATGAACCAGACGAGGCTAATGATGCTACTGAAGT
ACTAGAAGGAGATTTGACTGGCCAAGTTAGCTTTAAGCATGTGGACTTCCAGTATGTGGCTGATAAACCTTTGATTCGTG
ACTTTAATCTTGAGGTTAATCCTGGTGAAATGGTGGCCATTGTCGGTCCTACCGGTGCTGGGAAATCAACCATTATCAAC
CTTCTCATGCGTTTCTATGATGTGACTGCTGGTTCTATTTCAGTTGATGGTCACGATATCCGTAACCTGTCTCGTCAGGA
TTATCGTAAACAGTTTGGTATGGTGCTTCAGGATGCTTGGCTCTTTGAAGGAACTATCAAGGAAAATCTTCGCTTTGGTA
ATCTTGAGGCAACTGACGAAGAAATTGTTGAAGCTGCTAAGGCGGCCAATGTGGATCACTTTATCCGTACATTACCTGGC
GGTTACAACATGGAAATGAACCAGGAATCAAGTAACATCTCACTAGGACAAAAGCAACTTTTGACCATTGCGCGTGCGCT
TTTGGCTGATCCTAAAATCTTGATTTTGGACGAGGCGACCTCATCGGTTGATACCCGTCTGGAACTCCTGATTCAAAAAG
CCATGAAGACCCTTATGCAAGGTAGAACAAGCTTTGTCATTGCCCACCGTCTATCGACCATTCAAGAAGCAGACAAAATT
TTGGTACTTAAAGATGGTCAAATCATCGAACAAGGGAACCATGAATCCCTCCTTGCAGATAAAGGCTTCTATTACGACTT
GTATAATAGCCAGTTTGCGGAGAAATAA

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(29-310)

ABC transporter (ABC_tran)

(373-521)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

42.23

99.496

0.42