Detailed information NTG0853023

Bioinformatically predicted

Overview

• Name: recD/recD2/recDB
• Type: Machinery gene
• Locus tag: V6T26_RS01255
• Genome accession: NZ_CP145858
• Coordinates: 217235..219739 (-)
• Length: 834 a.a.
• NCBI ID: WP_410541305.1
• Uniprot ID: -
• Organism: Streptococcus salivarius strain KSS11
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 212235..224739

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V6T26_RS01225 (V6T26_01225)	-	213521..213751 (-)	231	WP_002884752.1	DNA-dependent RNA polymerase subunit epsilon	-
V6T26_RS01230 (V6T26_01230)	tsaB	214012..214698 (+)	687	WP_410541303.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	-
V6T26_RS01235 (V6T26_01235)	rimI	214658..215113 (+)	456	WP_037605671.1	ribosomal protein S18-alanine N-acetyltransferase	-
V6T26_RS01240 (V6T26_01240)	tsaD	215113..216126 (+)	1014	WP_037599075.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	-
V6T26_RS01245 (V6T26_01245)	-	216178..216870 (+)	693	WP_037598483.1	AzlC family ABC transporter permease	-
V6T26_RS01250 (V6T26_01250)	-	216857..217183 (+)	327	WP_410541304.1	AzlD domain-containing protein	-
V6T26_RS01255 (V6T26_01255)	recD/recD2/recDB	217235..219739 (-)	2505	WP_410541305.1	ATP-dependent RecD-like DNA helicase	Machinery gene
V6T26_RS01260 (V6T26_01260)	lepB	219800..220423 (-)	624	WP_013991198.1	signal peptidase I	-
V6T26_RS01265 (V6T26_01265)	rnhC	220442..221332 (-)	891	WP_060972421.1	ribonuclease HIII	-
V6T26_RS01270 (V6T26_01270)	zapA	221649..221963 (+)	315	WP_004183554.1	cell division protein ZapA	-
V6T26_RS01275 (V6T26_01275)	-	221960..222502 (+)	543	WP_410541306.1	CvpA family protein	-

Sequence

Protein

• Length: 834 a.a.
• Molecular weight: 93714.95 Da
• Isoelectric Point: 4.4341

>NTDB_id=853023 V6T26_RS01255 WP_410541305.1 217235..219739(-) (recD/recD2/recDB) [Streptococcus salivarius strain KSS11]
MQEFYFSGTIERVIFENTSNFFRILLLEIDETDSDFEDYEIIVTGTMGDVMEGEDYTFWGQLTNHPKYGEQLQMTRYERS
KPSASGLIKYFASDNFKGIGKKTAERIVEIYGEDPIDKILEDPSELEQIPNLSKVNREAFVAKLKINYGAEQILSKLSSY
GLTPKAASQIFNQYKEESLNLIEEHPYLLVEEIQGIGFKMADQLAERLGIASDAPERLRAALIHCLLEASMEEGDTYIEA
KALLERTIILLEGARPIELDPALVANQLTNLIQEDKVQNVETKIFDNTLYFAEQGIYTHLTRIMKDQPDVSSEDKILDSL
EGVEEELGITYDKVQKDAIIKALQSKVFILTGGPGTGKTTVINGIIKTYADLHGLDLKKSDLPIILAAPTGRAARRMNEL
TQLPSATIHRHLGLNSEDDFKTLEDYLDCDLIIIDEFSMVDTWLANQLFESISDSTQVIIVGDQDQLPSVGPGQVLADLL
QIDNLPKVSLTKIFRQSEDSTIVTLASQMRQGQLPADFTEKKADRSYFEAKANHIPQMVPKIVSAAIKSGIAAQDVQILA
PMYRGQAGINNLNTIMQDLLNPQEKANQFAFNDIFFRKNDKILHLVNDTELNVFNGDIGVITDLIPGKYTESKQDEIYMS
FDGNEVIYPRNEWNKITLAYAMSIHKSQGSEFPVVILPITRQSGRMLQRNLIYTAITRAKSKLVMLGEIAAFDYAVHNEG
AKRNTYLIQRFEQTYTQAVDKSVEKIVTNEATDASNQTKKENNGSSEPLENKDISGNINPSPTLINTYSQPVDKSVNKPV
QTEENYRLTEDNWSTIDPMIGLSEDDIAAFFNNN

Nucleotide

• Length: 2505 bp

>NTDB_id=853023 V6T26_RS01255 WP_410541305.1 217235..219739(-) (recD/recD2/recDB) [Streptococcus salivarius strain KSS11]
ATGCAAGAATTTTATTTTTCAGGAACTATCGAACGCGTCATTTTCGAAAACACTAGTAATTTTTTTCGTATCTTACTCTT
AGAGATTGACGAAACGGACAGTGATTTTGAAGACTACGAAATCATTGTCACAGGAACTATGGGGGATGTCATGGAGGGTG
AAGACTATACCTTCTGGGGCCAACTAACCAATCACCCTAAATATGGGGAACAGCTACAAATGACCCGCTACGAGCGTTCA
AAACCTTCTGCCAGCGGTCTTATCAAATATTTTGCCAGCGACAATTTCAAAGGAATCGGTAAGAAAACGGCCGAGCGTAT
TGTCGAAATTTACGGAGAAGACCCTATTGACAAGATTCTCGAGGATCCTAGCGAGTTAGAGCAGATTCCCAACCTATCCA
AGGTCAATCGAGAAGCCTTTGTTGCTAAGTTAAAAATCAATTATGGAGCCGAGCAAATCCTGTCCAAACTTTCTAGCTAT
GGCCTCACACCAAAGGCCGCCTCACAAATTTTCAACCAATATAAGGAAGAGTCACTAAATCTTATTGAGGAACACCCTTA
TCTATTAGTAGAGGAGATTCAAGGAATCGGTTTTAAAATGGCCGACCAACTAGCTGAACGTCTTGGAATTGCTAGTGATG
CCCCTGAGCGTTTACGAGCAGCCTTGATTCATTGTCTACTAGAAGCCAGTATGGAAGAAGGCGATACCTACATAGAAGCC
AAAGCCTTGCTTGAACGGACCATCATTCTTTTGGAAGGTGCTCGTCCGATTGAACTTGACCCCGCCTTGGTCGCTAACCA
ATTAACCAATCTTATCCAAGAGGATAAGGTGCAAAATGTAGAGACTAAAATCTTTGATAATACCCTATATTTTGCGGAAC
AGGGCATCTATACCCACCTAACTCGTATCATGAAGGACCAACCTGACGTCAGCTCTGAAGACAAAATCTTAGACAGCCTT
GAAGGGGTGGAAGAGGAGCTTGGTATTACTTATGATAAGGTTCAAAAAGATGCCATTATCAAAGCCCTACAAAGTAAGGT
CTTCATCCTGACAGGTGGTCCCGGAACAGGGAAAACCACTGTTATTAACGGCATTATTAAAACCTATGCTGACCTTCATG
GCCTAGATCTCAAAAAGTCTGATTTACCTATTATTTTAGCAGCACCAACGGGACGGGCTGCTCGTCGGATGAACGAACTC
ACCCAACTCCCTAGCGCCACTATTCATAGACATTTAGGCCTCAATAGCGAGGACGATTTTAAGACCTTAGAGGACTATCT
CGATTGCGATTTGATTATCATCGATGAGTTCTCTATGGTTGATACTTGGTTGGCCAATCAACTCTTTGAAAGTATCTCTG
ATTCAACCCAAGTTATCATTGTGGGTGACCAAGACCAACTACCTTCCGTAGGCCCTGGCCAAGTCTTGGCTGACCTTTTG
CAGATTGATAACTTGCCTAAGGTTTCCCTAACCAAAATTTTCAGACAATCCGAGGATTCCACTATCGTTACCCTAGCTAG
CCAGATGCGCCAAGGCCAACTACCCGCTGATTTCACAGAGAAAAAGGCTGACCGCTCTTACTTTGAGGCCAAGGCCAACC
ATATTCCACAGATGGTTCCTAAAATCGTCTCTGCTGCGATAAAGAGTGGGATTGCAGCTCAGGATGTTCAGATTCTAGCC
CCCATGTACCGAGGACAGGCTGGTATTAACAATCTCAATACCATTATGCAAGACCTACTTAATCCCCAAGAAAAGGCCAA
TCAGTTCGCCTTTAATGATATCTTCTTCCGCAAGAACGACAAGATTCTCCATCTGGTCAACGATACAGAACTCAATGTCT
TCAATGGCGACATCGGAGTCATTACTGATCTCATTCCTGGTAAATATACTGAAAGCAAACAGGACGAAATTTACATGTCC
TTCGACGGCAATGAGGTTATCTATCCTCGTAACGAATGGAATAAGATTACTCTGGCCTATGCTATGTCAATCCACAAATC
CCAAGGGAGTGAGTTCCCAGTCGTTATCCTTCCCATCACACGCCAAAGTGGGCGTATGCTACAACGTAATCTCATTTACA
CCGCAATCACACGCGCCAAGAGTAAACTAGTCATGCTAGGGGAAATCGCAGCCTTCGATTATGCTGTTCACAACGAGGGG
GCTAAACGAAATACTTATCTCATCCAACGTTTTGAACAAACTTATACACAAGCTGTTGATAAGTCTGTCGAGAAGATTGT
TACAAACGAGGCAACAGACGCATCCAATCAAACCAAAAAGGAAAACAACGGATCCTCAGAACCCCTTGAAAACAAAGATA
TTTCGGGAAATATAAATCCATCTCCAACTCTTATTAACACTTATTCACAGCCTGTGGATAAGTCTGTTAACAAACCTGTG
CAAACCGAAGAAAACTATCGTTTAACGGAAGATAATTGGTCAACTATAGATCCAATGATTGGTCTCAGTGAAGACGATAT
TGCTGCCTTTTTTAACAACAACTAA

Domains

Predicted by InterProScan.

• UvrD-like helicase C-terminal domain (UvrD_C_2) (659-705)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (572-638)

• AAA domain (AAA_30) (331-523)

• Helix-hairpin-helix containing domain (HHH_RecD2) (148-237)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD/recD2/recDB	Bacillus subtilis subsp. subtilis str. 168	45.114	89.568	0.404