Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutS/mutS2   Type   Machinery gene
Locus tag   V6T01_RS08940 Genome accession   NZ_CP145856
Coordinates   1937467..1939815 (+) Length   782 a.a.
NCBI ID   WP_201710612.1    Uniprot ID   -
Organism   Streptococcus salivarius strain KSS1     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1932467..1944815
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V6T01_RS08920 (V6T01_08895) - 1933153..1933278 (-) 126 WP_410541308.1 hypothetical protein -
  V6T01_RS08925 (V6T01_08900) - 1933427..1933591 (-) 165 WP_347095454.1 hypothetical protein -
  V6T01_RS08930 (V6T01_08905) - 1933708..1934109 (-) 402 WP_070847552.1 DUF6608 family protein -
  V6T01_RS08935 (V6T01_08910) polA 1934653..1937292 (-) 2640 WP_410541307.1 DNA polymerase I -
  V6T01_RS08940 (V6T01_08915) mutS/mutS2 1937467..1939815 (+) 2349 WP_201710612.1 endonuclease MutS2 Machinery gene
  V6T01_RS08945 (V6T01_08920) - 1939918..1940460 (-) 543 WP_410541306.1 CvpA family protein -
  V6T01_RS08950 (V6T01_08925) zapA 1940457..1940771 (-) 315 WP_004183554.1 cell division protein ZapA -
  V6T01_RS08955 (V6T01_08930) rnhC 1941088..1941978 (+) 891 WP_060972421.1 ribonuclease HIII -
  V6T01_RS08960 (V6T01_08935) lepB 1941997..1942620 (+) 624 WP_013991198.1 signal peptidase I -

Sequence

Protein


Download         Length: 782 a.a.        Molecular weight: 87698.96 Da        Isoelectric Point: 6.4053

>NTDB_id=852985 V6T01_RS08940 WP_201710612.1 1937467..1939815(+) (mutS/mutS2) [Streptococcus salivarius strain KSS1]
MNTKILDQLEFNKVKDQFTEYLQTEQAQAELRDLVPMTNPERIQNQFTEIQEMAEIFVEHHSFAIGSLRDISEPLRRLEL
DADLNIQELIAIKKVLQASADLGRFYADLENVELVALKRLFENIEAFPSLQGSLQSINDGGFIEHFASPELQNIRRQLKS
CDDAIRQTLQDILKKSGHMLAENLIASRNGRSVLPVKNTYRNRIAGVVHDISSSGNTVYIEPRAVIQLNEEITQLRADER
HEMARILHELSDQLRPQAAAIANNAWILGHMDFIRGKYLYLQDKKAVIPKISDNQTLQLLNVRHPLLVNPVANDLRFDED
LTAIVITGPNTGGKTVMLKTLGLAQLMAQSGLPILADKGSRVAIFQEIFADIGDEQSIEQSLSTFSSHMTHIVEILDAAD
SNSLVLVDELGAGTDPQEGASLAMAILEHLRLSQIKTMATTHYPELKAYGIETQHVENASMEFDTTTLSPTYRFMQGVPG
RSNAFEIARRLGLNEIIVKEAENLTDTDSDVNRIIEQLEAQTVETQKRLEHIKDVEQENLKFNRAVKKLYNEFSHEYDKE
LEKAQKEIQDMVDTALAESDSILKNLHDKSQLKPHEVIDAKGKLKKLAPQVDLSKNKVLRKAKKEKAARAPRIGDDIIVT
AYGQRGTLTSQAKNGNWEAQVGLIKMTLKADEFTLVRAQVEAQQPKKKQINVVKKAKKASGGPRARLDLRGKRYEEAMQE
LDAFIDQALLNNMSQVDIIHGIGTGVIRDAVTKYLRRHRHVKSFEYAPQSAGGSGCTIATLG

Nucleotide


Download         Length: 2349 bp        

>NTDB_id=852985 V6T01_RS08940 WP_201710612.1 1937467..1939815(+) (mutS/mutS2) [Streptococcus salivarius strain KSS1]
ATGAACACAAAGATTTTAGACCAATTAGAATTTAACAAGGTCAAGGACCAGTTCACAGAATACCTGCAGACCGAACAGGC
TCAGGCGGAGTTACGTGACTTGGTGCCTATGACCAATCCAGAAAGAATTCAAAATCAATTTACAGAAATCCAAGAAATGG
CAGAGATTTTCGTAGAGCACCATAGCTTTGCCATTGGTAGCTTGCGAGATATTTCTGAGCCCTTACGTCGCTTGGAACTG
GATGCTGACCTCAATATCCAGGAGCTTATTGCCATCAAGAAGGTGCTGCAAGCTTCGGCTGACCTTGGTCGCTTCTACGC
TGACCTTGAAAATGTTGAGCTCGTCGCTCTTAAACGTCTTTTCGAAAATATTGAGGCCTTCCCAAGTCTACAAGGCAGTC
TTCAAAGTATCAATGACGGTGGTTTCATTGAGCATTTTGCTAGCCCTGAGTTGCAAAATATCCGTCGTCAACTCAAATCT
TGTGATGATGCCATTCGCCAGACCTTGCAAGACATTCTCAAGAAATCTGGCCACATGTTGGCTGAGAATTTGATTGCTAG
TCGTAATGGTCGTTCAGTGCTGCCTGTCAAAAATACCTACCGTAACCGTATTGCTGGGGTTGTGCATGACATCTCAAGCT
CTGGAAACACAGTGTATATCGAGCCACGCGCCGTTATCCAACTTAACGAAGAAATTACACAATTACGTGCAGACGAACGT
CATGAGATGGCCCGTATCCTGCATGAATTGTCTGATCAACTCCGTCCACAAGCTGCTGCTATCGCTAACAACGCTTGGAT
TTTGGGTCACATGGACTTTATTCGAGGAAAATACCTCTATCTCCAGGATAAAAAGGCAGTTATTCCAAAGATTAGTGACA
ACCAAACACTCCAACTGCTTAACGTTCGTCACCCTCTTTTGGTCAATCCAGTAGCCAACGATTTACGCTTTGATGAGGAC
CTCACAGCCATTGTCATTACAGGTCCCAATACCGGTGGTAAAACGGTCATGCTTAAAACTCTGGGATTAGCACAACTGAT
GGCTCAATCTGGTCTTCCAATTTTGGCTGATAAGGGTAGTCGTGTAGCCATTTTCCAAGAGATTTTTGCGGACATCGGAG
ATGAACAGTCTATCGAACAGAGTTTGTCAACTTTCTCTAGTCACATGACCCACATTGTCGAGATTCTGGACGCTGCCGAC
AGCAACAGTCTTGTCTTAGTCGATGAGCTTGGGGCTGGTACTGATCCTCAGGAAGGGGCTAGTCTAGCCATGGCAATCCT
AGAGCACCTCCGTTTGAGCCAGATTAAAACCATGGCTACTACTCACTATCCTGAGCTTAAGGCCTATGGGATTGAGACGC
AACATGTGGAAAATGCCAGCATGGAGTTTGACACAACGACTTTAAGCCCTACCTATCGTTTTATGCAGGGAGTTCCTGGT
CGCTCTAACGCCTTTGAGATTGCTCGCCGCCTCGGTTTGAATGAAATTATTGTCAAAGAGGCAGAAAACCTCACGGATAC
TGATAGTGATGTCAACCGTATCATCGAGCAACTTGAAGCCCAAACTGTGGAAACACAAAAACGTCTGGAACACATCAAGG
ACGTTGAGCAAGAGAACCTTAAATTCAACCGTGCGGTCAAGAAACTCTATAACGAATTCTCCCATGAGTACGACAAGGAA
CTCGAAAAGGCTCAAAAAGAAATTCAGGATATGGTGGATACAGCTTTGGCTGAGAGCGATAGTATTCTCAAAAATCTCCA
CGATAAGAGTCAACTCAAACCTCATGAAGTTATTGACGCCAAAGGAAAACTCAAGAAACTTGCCCCACAAGTGGACCTCT
CTAAGAATAAGGTTCTTCGTAAGGCCAAGAAAGAAAAGGCTGCGCGTGCCCCTCGTATCGGAGATGATATCATTGTTACC
GCCTATGGTCAACGTGGTACGCTTACCAGTCAAGCCAAAAATGGTAACTGGGAAGCCCAGGTAGGTCTCATCAAGATGAC
ACTCAAGGCGGATGAATTCACTCTTGTTCGTGCCCAAGTGGAAGCCCAACAACCTAAGAAGAAACAGATTAACGTGGTTA
AAAAAGCCAAGAAGGCATCTGGCGGTCCTCGTGCCCGTCTAGACCTTCGTGGGAAACGTTACGAAGAAGCTATGCAAGAG
CTTGATGCCTTTATTGACCAAGCCCTACTTAATAACATGAGTCAGGTGGACATCATCCACGGTATTGGTACAGGTGTCAT
CCGTGATGCTGTTACCAAATATCTCCGCCGTCATCGCCATGTTAAAAGTTTTGAATATGCCCCACAAAGTGCTGGTGGTT
CCGGATGTACCATTGCAACCTTAGGATAA

Domains

Predicted by InterProScan.

MutS2 and Smr-associated SH3 domain (MSSS)

(633-672)

Smr domain (Smr)

(707-781)

MutS domain V (MutS_V)

(324-505)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutS/mutS2 Bacillus subtilis subsp. subtilis str. 168

39.344

100

0.399