Detailed information NTG0852384

Bioinformatically predicted

Overview

• Name: endA
• Type: Machinery gene
• Locus tag: QYH52_RS03070
• Genome accession: NZ_CP129339
• Coordinates: 630921..631757 (+)
• Length: 278 a.a.
• NCBI ID: WP_066024041.1
• Uniprot ID: -
• Organism: Ligilactobacillus animalis strain SRCM217969
• Function: cleavage of dsDNA into ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 625921..636757

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QYH52_RS03030 (QYH52_03030)	-	626105..626383 (+)	279	WP_010689502.1	DUF4160 domain-containing protein	-
QYH52_RS03035 (QYH52_03035)	-	626578..626703 (+)	126	Protein_599	helix-turn-helix transcriptional regulator	-
QYH52_RS03040 (QYH52_03040)	-	626763..626930 (+)	168	WP_136344616.1	M20 family metallopeptidase	-
QYH52_RS03045 (QYH52_03045)	-	627025..627291 (+)	267	WP_136344617.1	Na+-transporting malonate decarboxylase, carboxybiotin decarboxylase subunit, madB	-
QYH52_RS03050 (QYH52_03050)	-	628107..628469 (-)	363	WP_066024045.1	DUF1801 domain-containing protein	-
QYH52_RS03055 (QYH52_03055)	-	628537..628962 (+)	426	WP_066024044.1	N-acetyltransferase	-
QYH52_RS03060 (QYH52_03060)	-	629018..629665 (-)	648	WP_066024043.1	nitroreductase	-
QYH52_RS03065 (QYH52_03065)	asnA	629854..630861 (+)	1008	WP_066024042.1	aspartate--ammonia ligase	-
QYH52_RS03070 (QYH52_03070)	endA	630921..631757 (+)	837	WP_066024041.1	DNA/RNA non-specific endonuclease	Machinery gene
QYH52_RS03075 (QYH52_03075)	-	631925..632800 (+)	876	WP_301403097.1	type II CAAX endopeptidase family protein	-
QYH52_RS03080 (QYH52_03080)	-	632929..633603 (+)	675	WP_301403098.1	ABC transporter ATP-binding protein	-
QYH52_RS03085 (QYH52_03085)	-	633681..634052 (-)	372	WP_301403099.1	DUF4828 domain-containing protein	-
QYH52_RS03090 (QYH52_03090)	-	634273..635289 (+)	1017	WP_301403170.1	Gfo/Idh/MocA family oxidoreductase	-
QYH52_RS03095 (QYH52_03095)	-	635301..636557 (+)	1257	WP_216547228.1	DEAD/DEAH box helicase	-

Sequence

Protein

• Length: 278 a.a.
• Molecular weight: 30336.94 Da
• Isoelectric Point: 10.4774

>NTDB_id=852384 QYH52_RS03070 WP_066024041.1 630921..631757(+) (endA) [Ligilactobacillus animalis strain SRCM217969]
MKFKKILTGFAAALMLSGAIGAPVTAEATTHYGGWRTHQKNSSSGSGELKKSTPSQQLAQTVLTPDVVKQLGGEQNLKWN
NSGAFIVNNNKTDLKAKVSSAPYATNEVDSLKRPTVANALLNRTTRQYKNRHQTNNGSTKWKPQGFKQLTNLSGAYNHAY
DRGHLLGYALVGNIRGFDASESNPKNIATQTAWANEANAKYSTGQNYYESLVRKALDRNKTVRYRVTNIYSGNNLVPAGA
HLEAKSSDGSLEYNVFIPNVQKGLKIDYATGHATKVNN

Nucleotide

• Length: 837 bp

>NTDB_id=852384 QYH52_RS03070 WP_066024041.1 630921..631757(+) (endA) [Ligilactobacillus animalis strain SRCM217969]
ATGAAGTTCAAAAAAATACTGACCGGATTTGCGGCAGCTTTGATGCTCAGTGGTGCGATCGGGGCACCGGTAACGGCCGA
AGCAACTACTCACTATGGTGGCTGGCGCACACATCAAAAAAATAGCTCGAGTGGCTCGGGTGAACTAAAAAAGAGCACCC
CATCACAACAATTAGCCCAAACAGTTTTAACACCAGATGTTGTTAAACAATTGGGTGGTGAGCAAAATCTCAAATGGAAC
AACAGTGGGGCTTTTATCGTTAATAACAACAAGACAGATCTAAAAGCTAAGGTTTCTAGTGCACCTTATGCAACAAATGA
AGTCGATAGCTTGAAACGTCCGACGGTGGCAAACGCCCTTTTGAATAGGACAACGCGTCAATACAAGAATCGCCACCAAA
CTAATAATGGTTCGACTAAATGGAAACCACAGGGCTTTAAGCAACTCACTAACTTAAGTGGCGCCTATAACCATGCTTAT
GATCGCGGTCACTTACTAGGGTATGCTTTAGTTGGAAATATTCGTGGTTTTGATGCGAGTGAGAGCAATCCTAAAAATAT
TGCGACTCAAACTGCTTGGGCTAATGAAGCTAATGCAAAGTATTCAACAGGCCAAAATTATTACGAAAGTCTTGTTCGAA
AAGCCTTGGATCGTAACAAGACTGTCCGTTATCGTGTGACAAATATCTATAGTGGTAATAATTTAGTCCCAGCAGGAGCT
CACTTGGAAGCCAAATCAAGTGATGGTTCGTTGGAATATAATGTTTTTATCCCTAATGTTCAAAAGGGCTTAAAGATCGA
CTATGCTACTGGTCATGCGACAAAAGTGAACAACTGA

Domains

Predicted by InterproScan.

• DNA/RNA non-specific endonuclease (Endonuclease_NS) (82-250)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
endA	Streptococcus pneumoniae Rx1	65.333	80.935	0.529
endA	Streptococcus pneumoniae D39	65.333	80.935	0.529
endA	Streptococcus pneumoniae R6	65.333	80.935	0.529
endA	Streptococcus pneumoniae TIGR4	65.333	80.935	0.529