Detailed information
Bioinformatically predicted
Overview
| Name | pilE | Type | Machinery gene |
| Locus tag | FLY89_RS17615 | Genome accession | NZ_AP024415 |
| Coordinates | 3638826..3639251 (-) | Length | 141 a.a. |
| NCBI ID | WP_000788342.1 | Uniprot ID | N9K1U0 |
| Organism | Acinetobacter baumannii strain NIPH17_0019 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 3633826..3644251
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FLY89_RS17585 (KHAB170019_35090) | - | 3634354..3635388 (+) | 1035 | WP_001189447.1 | lipase secretion chaperone | - |
| FLY89_RS17590 (KHAB170019_35100) | - | 3635503..3636444 (+) | 942 | WP_085916958.1 | lipase family alpha/beta hydrolase | - |
| FLY89_RS17595 (KHAB170019_35110) | rplS | 3636497..3636865 (-) | 369 | WP_000014562.1 | 50S ribosomal protein L19 | - |
| FLY89_RS17600 (KHAB170019_35120) | trmD | 3637074..3637814 (-) | 741 | WP_000464598.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| FLY89_RS17605 (KHAB170019_35130) | rimM | 3637860..3638408 (-) | 549 | WP_000189236.1 | ribosome maturation factor RimM | - |
| FLY89_RS17610 (KHAB170019_35140) | rpsP | 3638428..3638679 (-) | 252 | WP_000260334.1 | 30S ribosomal protein S16 | - |
| FLY89_RS17615 (KHAB170019_35150) | pilE | 3638826..3639251 (-) | 426 | WP_000788342.1 | type IV pilin protein | Machinery gene |
| FLY89_RS17620 (KHAB170019_35160) | pilY2 | 3639248..3639730 (-) | 483 | WP_001046420.1 | type IV pilin protein | Machinery gene |
| FLY89_RS17625 (KHAB170019_35170) | pilY1 | 3639743..3643597 (-) | 3855 | WP_000768970.1 | PilC/PilY family type IV pilus protein | Machinery gene |
Sequence
Protein
Download Length: 141 a.a. Molecular weight: 15214.45 Da Isoelectric Point: 7.8464
>NTDB_id=85132 FLY89_RS17615 WP_000788342.1 3638826..3639251(-) (pilE) [Acinetobacter baumannii strain NIPH17_0019]
MKNGFTLIEIMIVVAIIAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESEKVVHNRYPSNATIQSIYGSNVSPIQG
QALYKLAFATLNDSTWVLTATPISTSSQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE
MKNGFTLIEIMIVVAIIAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESEKVVHNRYPSNATIQSIYGSNVSPIQG
QALYKLAFATLNDSTWVLTATPISTSSQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE
Nucleotide
Download Length: 426 bp
>NTDB_id=85132 FLY89_RS17615 WP_000788342.1 3638826..3639251(-) (pilE) [Acinetobacter baumannii strain NIPH17_0019]
ATGAAGAATGGTTTTACTTTAATAGAAATCATGATTGTAGTAGCGATAATTGCAATTTTAGCAGCTATAGCGACACCTTC
ATATTTGCAATATTTACGTAAAGGGCATCGTACAGCTGTTCAATCCGAAATGATGAATATTGCCCAAACATTAGAATCAG
AAAAAGTAGTTCACAATCGTTATCCGTCGAATGCGACCATACAGTCGATTTATGGTTCTAATGTGAGTCCTATACAAGGT
CAGGCTCTATATAAGTTAGCTTTTGCAACTCTGAATGATTCAACTTGGGTACTTACTGCAACACCTATTTCTACTAGCTC
ACAAGCAGGTGATGGAATTATTTGTTTAAATGACCAAGGGCAAAAATTTTGGGCAAAAGGTGCCACAGTTTGTGCACTAT
CTGCTTCATCAAGTTGGACAGAGTAA
ATGAAGAATGGTTTTACTTTAATAGAAATCATGATTGTAGTAGCGATAATTGCAATTTTAGCAGCTATAGCGACACCTTC
ATATTTGCAATATTTACGTAAAGGGCATCGTACAGCTGTTCAATCCGAAATGATGAATATTGCCCAAACATTAGAATCAG
AAAAAGTAGTTCACAATCGTTATCCGTCGAATGCGACCATACAGTCGATTTATGGTTCTAATGTGAGTCCTATACAAGGT
CAGGCTCTATATAAGTTAGCTTTTGCAACTCTGAATGATTCAACTTGGGTACTTACTGCAACACCTATTTCTACTAGCTC
ACAAGCAGGTGATGGAATTATTTGTTTAAATGACCAAGGGCAAAAATTTTGGGCAAAAGGTGCCACAGTTTGTGCACTAT
CTGCTTCATCAAGTTGGACAGAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilE | Acinetobacter baumannii D1279779 |
92.199 |
100 |
0.922 |
| comF | Acinetobacter baylyi ADP1 |
52.143 |
99.291 |
0.518 |