Detailed information NTG0851051

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: QWT68_RS06045
• Genome accession: NZ_CP129119
• Coordinates: 1131585..1134053 (-)
• Length: 822 a.a.
• NCBI ID: WP_290150181.1
• Uniprot ID: -
• Organism: Sporosarcina trichiuri strain 0.2-SM1T-5
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1126585..1139053

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QWT68_RS06025 (QWT68_06025)	-	1127555..1127851 (-)	297	WP_290150179.1	DUF1292 domain-containing protein	-
QWT68_RS06030 (QWT68_06030)	ruvX	1127865..1128281 (-)	417	WP_040286679.1	Holliday junction resolvase RuvX	-
QWT68_RS06035 (QWT68_06035)	-	1128278..1128550 (-)	273	WP_040286680.1	IreB family regulatory phosphoprotein	-
QWT68_RS06040 (QWT68_06040)	alaS	1128633..1131263 (-)	2631	WP_290150180.1	alanine--tRNA ligase	-
QWT68_RS06045 (QWT68_06045)	recD2	1131585..1134053 (-)	2469	WP_290150181.1	ATP-dependent RecD-like DNA helicase	Machinery gene
QWT68_RS06050 (QWT68_06050)	-	1134064..1134741 (-)	678	WP_040286683.1	tetratricopeptide repeat protein	-
QWT68_RS06055 (QWT68_06055)	mnmA	1134755..1135876 (-)	1122	WP_276327492.1	tRNA 2-thiouridine(34) synthase MnmA	-
QWT68_RS06060 (QWT68_06060)	-	1135893..1137050 (-)	1158	WP_040286684.1	cysteine desulfurase family protein	-
QWT68_RS06065 (QWT68_06065)	-	1137066..1137488 (-)	423	WP_040286685.1	Rrf2 family transcriptional regulator	-
QWT68_RS06070 (QWT68_06070)	-	1137625..1138911 (+)	1287	WP_040286686.1	replication-associated recombination protein A	-

Sequence

Protein

• Length: 822 a.a.
• Molecular weight: 90719.61 Da
• Isoelectric Point: 4.7533

>NTDB_id=851051 QWT68_RS06045 WP_290150181.1 1131585..1134053(-) (recD2) [Sporosarcina trichiuri strain 0.2-SM1T-5]
MGQSEIANTEEPFLIGRAVVTIFHNPDSLFTIAKLKVKKTNCSFEGKEIVVKGSFPRLSEEEDYRFTGRLITHPTYGLQF
EVKTFRKELPGTETGLIHYLSGDLFPGIGRKTAETIIEHLGQEAISKILENEDVLDEIPRLNAEKKETLVSVLRENLGLE
RTIVRLNEWGFGPQIAMRIYQTYQEDTIEKLTENPYRLIEDVEGVGFQRADELGRQLGITGTHTARIQAAVLHTISTATL
SSGHVYLDAAQVMPESKKLLEMSQPFEIPFKLLSEAIIMLVEEGRLSAEQRRLYMPSLYFSELGIAAKMAMLLDQDRDGA
FPSSEIRKAIGETEERIGVSYAETQADAIEKALNSPVMILTGGPGTGKTTVVRGLVEVYAELHGLSLDPKEYAKKEEPFP
IVLAAPTGRAAKRLSESTGLPAMTIHRLLGFTGQEKEEETEREIEAGLVIIDEASMLDTWLAHQLLKAVGKGAQLLFVGD
QDQLPSVGPGQVLRDLLTSGVIPVVELTEIYRQSAGSTIIELAHAIKQSEPLGDITGKTGDRSFIRTDAEQVTAVVSQIV
KNAMKKGQAIKDVQVLAPMYKGPAGIDALNRVIQEMVNPPAAGRKEVTFGDVTYRIGDRVLQLVNQPESNVFNGDMGEVT
AILKAKETVEKKDLMVVSFDGIEVSYERPDLNQLTLAYCCSIHKSQGSEFPTVIMPVVRSHRKMLRRNLLYTGITRAKNF
LILCGSPQEFAEGIARVDERERQTTLKERLNGETPPAQPAEEPQKAGLDMDRAPEQAQPAGDETESTPEVLPEELTAETV
LHVDPMIGMQGVSPYDFLETAD

Nucleotide

• Length: 2469 bp

>NTDB_id=851051 QWT68_RS06045 WP_290150181.1 1131585..1134053(-) (recD2) [Sporosarcina trichiuri strain 0.2-SM1T-5]
ATGGGACAGTCCGAAATAGCGAATACCGAAGAACCCTTCCTGATCGGGCGGGCGGTTGTGACGATTTTCCACAACCCGGA
CAGTCTGTTCACGATCGCCAAACTGAAAGTGAAAAAGACGAACTGCTCTTTTGAAGGGAAGGAAATCGTCGTGAAGGGAA
GTTTTCCGCGACTTTCCGAGGAAGAGGACTATAGGTTCACAGGCAGGCTGATCACACATCCGACCTACGGACTCCAGTTC
GAGGTGAAAACGTTCCGGAAAGAACTTCCCGGCACGGAAACCGGGCTCATCCATTACTTATCCGGGGACCTGTTCCCCGG
TATCGGCAGGAAGACGGCGGAAACGATCATCGAGCATCTCGGCCAGGAAGCGATCAGCAAAATCCTGGAAAACGAAGATG
TGCTCGATGAAATCCCGAGACTCAATGCAGAAAAGAAAGAGACGCTCGTATCCGTCCTTCGTGAGAATCTTGGGCTGGAG
CGTACCATCGTCCGTTTGAACGAGTGGGGGTTCGGACCGCAGATTGCGATGCGGATCTATCAGACGTATCAGGAAGATAC
GATCGAGAAGCTGACCGAAAACCCGTACCGTCTGATCGAAGACGTCGAAGGGGTCGGGTTCCAGAGGGCGGACGAACTCG
GCAGGCAGCTCGGCATCACAGGAACGCATACGGCCAGAATCCAGGCGGCGGTCCTCCATACGATCAGCACAGCAACGCTG
TCATCGGGCCATGTCTACCTGGATGCCGCACAAGTGATGCCCGAATCGAAAAAACTGCTCGAGATGAGCCAACCTTTCGA
AATACCGTTTAAGCTCCTTTCCGAAGCGATCATCATGCTTGTGGAAGAAGGGCGTCTCAGCGCGGAACAGCGCCGGCTAT
ACATGCCGTCCCTTTATTTTTCGGAACTTGGCATCGCTGCAAAGATGGCCATGCTGCTGGATCAGGACAGGGACGGGGCG
TTCCCCTCCTCGGAAATACGCAAAGCGATCGGTGAAACGGAAGAGCGTATCGGCGTCAGTTATGCGGAGACACAGGCGGA
TGCAATCGAGAAGGCGCTCAACTCACCTGTCATGATCTTGACCGGCGGGCCGGGAACCGGCAAGACGACAGTCGTACGGG
GTCTGGTTGAAGTGTATGCCGAACTGCACGGACTGTCGCTCGATCCGAAGGAATATGCCAAGAAAGAAGAACCGTTCCCG
ATCGTCCTCGCCGCTCCGACCGGCCGGGCGGCAAAACGTCTTTCCGAATCGACTGGCCTCCCTGCGATGACCATCCATCG
TCTGCTCGGTTTCACAGGACAGGAGAAGGAAGAAGAGACGGAGCGGGAAATCGAGGCAGGTCTGGTCATTATCGACGAAG
CCTCCATGCTCGATACGTGGCTGGCCCATCAGCTTTTGAAAGCGGTCGGCAAAGGGGCGCAGCTGCTGTTCGTCGGCGAC
CAGGATCAGCTGCCATCCGTCGGTCCGGGGCAAGTGCTCCGTGATCTGCTCACTTCAGGTGTCATTCCGGTCGTCGAGCT
GACGGAAATTTACCGTCAGAGCGCGGGATCGACGATCATCGAACTCGCCCATGCCATCAAACAGTCCGAACCGCTTGGGG
ATATCACCGGCAAGACAGGGGACCGTTCCTTCATCCGGACAGATGCCGAACAGGTGACGGCCGTCGTCAGCCAGATCGTC
AAGAATGCGATGAAAAAAGGTCAGGCCATCAAGGACGTCCAGGTCCTCGCTCCGATGTACAAGGGTCCGGCAGGCATCGA
CGCGCTGAACAGGGTCATCCAGGAGATGGTGAACCCGCCTGCCGCAGGGCGCAAGGAAGTGACGTTCGGTGATGTGACCT
ACCGGATCGGCGACCGGGTGCTGCAGCTGGTCAACCAGCCGGAGAGCAACGTATTCAATGGGGACATGGGCGAAGTGACC
GCCATTCTGAAAGCGAAAGAGACGGTGGAAAAGAAGGATCTGATGGTCGTCTCATTCGACGGTATCGAAGTTTCGTACGA
GCGGCCGGATCTGAACCAGCTGACGCTGGCCTACTGCTGTTCCATCCACAAATCCCAGGGAAGCGAGTTTCCGACGGTGA
TCATGCCCGTCGTGCGCAGCCACCGCAAAATGCTGCGGCGCAACCTGCTGTACACCGGCATCACCCGCGCCAAGAACTTC
CTGATCCTCTGCGGCAGCCCGCAGGAATTCGCCGAAGGCATCGCCAGAGTGGACGAGAGGGAGCGGCAGACGACGCTGAA
AGAACGGCTGAACGGCGAGACACCGCCTGCCCAGCCGGCAGAGGAACCGCAGAAAGCCGGCCTGGATATGGATCGGGCGC
CTGAACAGGCACAACCGGCCGGAGATGAAACGGAAAGCACACCGGAAGTCCTGCCGGAAGAACTGACAGCGGAAACCGTC
CTGCATGTCGACCCGATGATCGGTATGCAGGGTGTAAGTCCGTATGATTTTCTTGAAACCGCGGATTGA

Domains

Predicted by InterproScan.

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (589-658)

• Helix-hairpin-helix containing domain (HHH_RecD2) (158-246)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (677-724)

• AAA domain (AAA_30) (341-547)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	51.843	99.027	0.513