Detailed information NTG0851020

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: QWT69_RS06615
• Genome accession: NZ_CP129118
• Coordinates: 1407939..1410416 (+)
• Length: 825 a.a.
• NCBI ID: WP_317970187.1
• Uniprot ID: -
• Organism: Sporosarcina oncorhynchi strain T2O-4
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1402939..1415416

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QWT69_RS06590 (QWT69_06605)	-	1403092..1404378 (-)	1287	WP_317970177.1	replication-associated recombination protein A	-
QWT69_RS06595 (QWT69_06610)	-	1404505..1404924 (+)	420	WP_317970179.1	Rrf2 family transcriptional regulator	-
QWT69_RS06600 (QWT69_06615)	-	1404947..1406089 (+)	1143	WP_317970181.1	cysteine desulfurase family protein	-
QWT69_RS06605 (QWT69_06620)	mnmA	1406111..1407235 (+)	1125	WP_317970183.1	tRNA 2-thiouridine(34) synthase MnmA	-
QWT69_RS06610 (QWT69_06625)	-	1407248..1407913 (+)	666	WP_317970185.1	tetratricopeptide repeat protein	-
QWT69_RS06615 (QWT69_06630)	recD2	1407939..1410416 (+)	2478	WP_317970187.1	ATP-dependent RecD-like DNA helicase	Machinery gene
QWT69_RS06620 (QWT69_06635)	alaS	1410746..1413379 (+)	2634	WP_317970189.1	alanine--tRNA ligase	-
QWT69_RS06625 (QWT69_06640)	-	1413461..1413733 (+)	273	WP_317970191.1	IreB family regulatory phosphoprotein	-
QWT69_RS06630 (QWT69_06645)	ruvX	1413730..1414149 (+)	420	WP_317970193.1	Holliday junction resolvase RuvX	-
QWT69_RS06635 (QWT69_06650)	-	1414161..1414463 (+)	303	WP_317970195.1	DUF1292 domain-containing protein	-

Sequence

Protein

• Length: 825 a.a.
• Molecular weight: 91944.39 Da
• Isoelectric Point: 4.9563

>NTDB_id=851020 QWT69_RS06615 WP_317970187.1 1407939..1410416(+) (recD2) [Sporosarcina oncorhynchi strain T2O-4]
MTQHTGQAASDEAVFIVGRPVVTIFHNPDNLFSIVKMKITKTNSGYEDKEIVIKGSFPPLANEEDYRLTGRLVNHATYGK
QFDVHTFTKEMPETETGIVHYLSGDLFPGIGRKTADTIVKKLGKDAIKKILADRSVLDLVPRLSEDKKDTLVTVLQENLG
LERSMVQLNEWGFGPQLSMRIYQTYREEVLELLRENPFRLIEDIEGIGFQRADELGRQLGITGKHPSRVKAAILHTLNQA
VQSSGHVYLEADRILPEVKGLLEASQNEEVSFQDISRAVIELVEEGRLSGEGRKLYIPSLYFSEIGIASKLERLLENDLS
DTFPVSEIRKAIGEAEERLEVSYAETQVAAIEKALHSPVMILTGGPGTGKTTVIRGLVEVYAELHGLSLDPKVYAQKEET
FPIVLAAPTGRAAKRMSESTGLPAMTIHRLLGFNGQEKEDATGKEVEGRLIIIDEMSMVDTWLAHQLLKALDNDIQILFV
GDQDQLPPVGPGQVLRDMLDSGKIPVVELTEIYRQSEGSTIIEMAHMIKNSTMTGDITQKTGDRSFIKANGDQILVAVEK
ILKNALSKGHSIKNIQVLAPMYKGPAGIDGLNKMIQQMVNPPGPDRKEVVFGEVVYRIGDKVLQLVNQPESNVFNGDMGE
VISIIKAKETVDKKELLIVSYDGIEVEYERNDLKQITLAYCCSIHKSQGSEFPIVIMPVVRGYRKMLRRNLLYTGITRAK
DFLILCGEPEEFKIGINRTDELERQTTLKERLRKDLITEMVDEGDSALEETTVAKSEVNTTEVVANGEEREITRDYRLTM
DTILGIDPMIGMHGVTPNDFVNSMD

Nucleotide

• Length: 2478 bp

>NTDB_id=851020 QWT69_RS06615 WP_317970187.1 1407939..1410416(+) (recD2) [Sporosarcina oncorhynchi strain T2O-4]
ATGACACAGCATACTGGACAAGCTGCGAGTGACGAGGCGGTTTTTATCGTCGGAAGACCGGTCGTGACGATTTTTCATAA
TCCTGACAATCTGTTTTCAATCGTTAAGATGAAAATAACAAAAACGAACAGCGGATATGAGGACAAGGAAATCGTTATTA
AAGGCAGCTTCCCGCCACTTGCGAATGAAGAAGATTATCGGCTAACCGGAAGACTTGTCAATCATGCAACATATGGCAAG
CAATTTGATGTGCATACATTTACAAAGGAAATGCCCGAAACAGAAACAGGTATCGTCCACTATCTTTCCGGCGACCTGTT
TCCCGGCATTGGCCGCAAAACTGCTGATACCATCGTCAAGAAATTAGGCAAAGATGCCATTAAAAAGATTTTGGCAGACC
GTTCTGTACTCGATCTTGTCCCTAGGCTTTCTGAAGATAAGAAAGATACACTCGTCACCGTCCTTCAGGAAAACCTCGGA
CTGGAACGGAGTATGGTGCAATTGAACGAATGGGGATTCGGACCTCAGTTGTCTATGCGCATTTACCAGACATACCGTGA
AGAGGTACTAGAGCTTTTGAGGGAAAACCCATTCAGACTGATCGAAGATATCGAAGGAATCGGGTTTCAGCGAGCCGACG
AACTTGGCAGGCAACTTGGGATTACAGGGAAGCATCCGTCCAGAGTGAAAGCAGCCATCTTACATACGTTAAATCAGGCA
GTTCAATCATCAGGTCATGTCTATTTGGAAGCAGATAGAATTTTGCCTGAAGTGAAAGGCTTATTAGAAGCGAGCCAAAA
TGAAGAAGTATCGTTCCAAGATATCTCGCGGGCAGTAATCGAGCTGGTGGAAGAAGGAAGACTATCTGGAGAAGGGCGTA
AATTATATATCCCTTCCTTATACTTCTCTGAAATCGGCATTGCCAGCAAGTTGGAACGTTTATTGGAAAACGATTTATCG
GATACATTTCCAGTTTCTGAAATTCGAAAAGCTATTGGTGAAGCGGAGGAGCGTCTTGAAGTCAGTTATGCTGAAACGCA
AGTAGCGGCGATTGAAAAAGCCCTTCATTCTCCAGTCATGATTTTGACAGGCGGGCCCGGAACAGGGAAAACAACCGTCA
TACGTGGACTAGTGGAAGTGTATGCAGAATTGCATGGCTTGTCATTGGATCCGAAAGTGTACGCGCAAAAAGAGGAAACG
TTTCCAATTGTTCTTGCGGCTCCTACAGGCAGGGCCGCCAAAAGGATGTCAGAATCGACAGGTTTACCTGCCATGACAAT
TCATCGGTTGCTTGGTTTCAACGGTCAAGAGAAAGAGGATGCAACCGGCAAGGAAGTGGAAGGAAGGCTCATCATTATCG
ATGAAATGTCGATGGTCGATACATGGCTTGCGCATCAATTATTGAAAGCGTTGGATAATGACATCCAGATTCTTTTTGTA
GGCGATCAGGATCAGTTGCCACCAGTTGGCCCAGGGCAAGTATTGAGAGATATGCTGGACTCTGGCAAGATCCCTGTTGT
TGAACTGACAGAAATTTATCGGCAAAGCGAAGGTTCAACCATAATCGAGATGGCTCATATGATTAAGAATTCTACGATGA
CAGGTGATATTACACAGAAAACAGGGGACCGTTCGTTTATAAAGGCGAATGGCGATCAAATTCTCGTAGCTGTCGAGAAG
ATTTTGAAAAACGCATTGTCAAAAGGTCATTCCATCAAAAATATCCAAGTGCTCGCTCCGATGTATAAAGGGCCAGCAGG
CATCGATGGATTGAACAAAATGATTCAGCAGATGGTCAATCCCCCTGGTCCTGACCGAAAAGAAGTTGTATTCGGAGAAG
TCGTCTACCGAATCGGTGACAAAGTTTTGCAACTTGTCAATCAACCCGAGAGCAATGTGTTCAATGGTGATATGGGGGAA
GTTATTTCCATCATTAAAGCAAAAGAAACCGTTGATAAAAAAGAGCTGCTCATCGTTTCCTATGACGGTATAGAAGTGGA
GTACGAACGGAATGATTTGAAACAGATTACACTCGCCTACTGTTGCTCTATCCATAAATCACAAGGAAGTGAATTTCCGA
TTGTCATCATGCCTGTTGTGCGTGGCTATCGTAAAATGCTTCGCAGAAATTTGCTGTATACCGGCATTACACGGGCAAAG
GACTTCCTTATCCTGTGTGGAGAGCCCGAGGAGTTCAAAATCGGTATTAACCGCACAGATGAATTGGAACGTCAGACGAC
TTTGAAAGAGCGTTTGCGAAAAGATCTCATTACCGAAATGGTCGATGAAGGGGACAGTGCCTTAGAAGAGACGACTGTGG
CAAAGTCTGAAGTGAATACTACTGAGGTTGTTGCGAACGGGGAAGAACGGGAAATCACAAGAGATTACCGGTTGACAATG
GATACAATCTTAGGAATTGATCCGATGATTGGCATGCACGGAGTGACACCAAACGACTTCGTTAACTCGATGGATTGA

Domains

Predicted by InterproScan.

• Helix-hairpin-helix containing domain (HHH_RecD2) (160-248)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (679-726)

• AAA domain (AAA_30) (343-549)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (591-650)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	52.606	100	0.526