Detailed information NTG0850583

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: LMH29_RS13475
• Genome accession: NZ_CP145139
• Coordinates: 2774192..2775175 (-)
• Length: 327 a.a.
• NCBI ID: WP_001196477.1
• Uniprot ID: A0A0H2VBW7
• Organism: Escherichia coli strain CAVp367
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 2769192..2780175

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LMH29_RS13450 (LMH29_13450)	-	2770341..2770448 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
LMH29_RS13455 (LMH29_13455)	-	2770824..2770931 (-)	108	WP_000170745.1	type I toxin-antitoxin system toxin Ldr family protein	-
LMH29_RS13460 (LMH29_13460)	-	2771307..2771414 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
LMH29_RS13465 (LMH29_13465)	yhjV	2771890..2773161 (+)	1272	WP_001296513.1	aromatic amino acid transport family protein	-
LMH29_RS13470 (LMH29_13470)	dppF	2773191..2774195 (-)	1005	WP_000103571.1	dipeptide ABC transporter ATP-binding subunit DppF	-
LMH29_RS13475 (LMH29_13475)	amiE	2774192..2775175 (-)	984	WP_001196477.1	dipeptide ABC transporter ATP-binding protein	Regulator
LMH29_RS13480 (LMH29_13480)	dppC	2775186..2776088 (-)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
LMH29_RS13485 (LMH29_13485)	dppB	2776098..2777117 (-)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
LMH29_RS13490 (LMH29_13490)	dppA	2777424..2779031 (-)	1608	WP_001222871.1	dipeptide ABC transporter substrate-binding protein DppA	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35801.38 Da
• Isoelectric Point: 6.5813

>NTDB_id=850583 LMH29_RS13475 WP_001196477.1 2774192..2775175(-) (amiE) [Escherichia coli strain CAVp367]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNLVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDKCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=850583 LMH29_RS13475 WP_001196477.1 2774192..2775175(-) (amiE) [Escherichia coli strain CAVp367]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCTGTAGACCGCATCAG
CTACAGCGTAAAACAGGGTGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCTGGTAAATCGGTCAGTTCGCTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCAATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAAGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCTGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCAACCACTGCGCTGGACGTGAC
CATTCAGGCGCAAATTATCGAACTGCTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATTATCGTGATGTATGCAGGCCAGGTAGTAGAAACGGGCGATGCGCACGCT
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTACGCCA
CTGACAAATGCCGTGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (24-181)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

3D structure

• AlphaFold DB: A0A0H2VBW7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404