Detailed information NTG0848158

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: V5G23_RS15220
• Genome accession: NZ_CP144925
• Coordinates: 2964153..2965418 (-)
• Length: 421 a.a.
• NCBI ID: WP_017474364.1
• Uniprot ID: -
• Organism: Bacillus licheniformis strain CP13
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2959153..2970418

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V5G23_RS15195 (V5G23_15195)	-	2959278..2959442 (+)	165	WP_003183953.1	YrzK family protein	-
V5G23_RS15200 (V5G23_15200)	hisS	2959817..2961091 (+)	1275	WP_003183951.1	histidine--tRNA ligase	-
V5G23_RS15205 (V5G23_15205)	aspS	2961106..2962884 (+)	1779	WP_003183949.1	aspartate--tRNA ligase	-
V5G23_RS15215 (V5G23_15215)	-	2963304..2964068 (+)	765	WP_003183947.1	tRNA threonylcarbamoyladenosine dehydratase	-
V5G23_RS15220 (V5G23_15220)	rarA	2964153..2965418 (-)	1266	WP_017474364.1	replication-associated recombination protein A	Machinery gene
V5G23_RS15225 (V5G23_15225)	cymR	2966057..2966473 (+)	417	WP_009327777.1	cysteine metabolism transcriptional regulator CymR	-
V5G23_RS15230 (V5G23_15230)	-	2966494..2967633 (+)	1140	WP_003183940.1	cysteine desulfurase family protein	-
V5G23_RS15235 (V5G23_15235)	mnmA	2967739..2968857 (+)	1119	WP_069500650.1	tRNA 2-thiouridine(34) synthase MnmA	-
V5G23_RS15240 (V5G23_15240)	-	2968951..2969601 (+)	651	WP_003183935.1	tetratricopeptide repeat protein	-

Sequence

Protein

• Length: 421 a.a.
• Molecular weight: 46288.25 Da
• Isoelectric Point: 7.6230

>NTDB_id=848158 V5G23_RS15220 WP_017474364.1 2964153..2965418(-) (rarA) [Bacillus licheniformis strain CP13]
MKPLAFRMRPTKIEEVLGQDHLVGEGKIIHRMVQAKHLSSMILYGAPGIGKTSIATAIAGSTSIAFRKLNAVINNKKDME
AIAAEAKMSGQVILILDEVHRLDKGKQDFLLPYLENGMIIMIGATTANPYHAINPAIRSRTQIFELHPLDPEQIKTAIKR
ALEDKHRGLGSYDVAVDDEALDHLARGCGGDVRSALNALELAVLSTKENSEGAIRITLEIAEECLQKKGFVHDKDGDAHY
DVISAFQKSIRGSDVNAALHYMARLIEAGDLESLARRLLVIAYEDVGLASPQAGGRTLQAIQTAERIGFPEARIPLANAV
IELCLSPKSNSAILAVDEALSDVRSGKIGDVPNHLKDAHYKGAAELGRGVEYKYPHDYENGWVKQQYLPDPLKNKVYYQP
KQTGKFELALKQVYDKLMKQK

Nucleotide

• Length: 1266 bp

>NTDB_id=848158 V5G23_RS15220 WP_017474364.1 2964153..2965418(-) (rarA) [Bacillus licheniformis strain CP13]
ATGAAACCACTCGCATTTCGAATGCGCCCTACAAAAATCGAAGAGGTTCTCGGCCAGGATCACCTGGTCGGGGAAGGAAA
GATCATTCATCGGATGGTGCAGGCCAAACACCTTTCATCGATGATTCTGTACGGCGCCCCGGGCATCGGCAAAACGTCGA
TCGCCACGGCGATTGCCGGCAGCACGAGCATCGCTTTCCGAAAGCTGAACGCAGTCATCAATAATAAAAAGGATATGGAA
GCCATTGCCGCCGAAGCAAAAATGTCGGGGCAGGTTATCTTAATCCTTGATGAGGTGCACCGGCTTGACAAAGGCAAGCA
GGACTTTCTCCTTCCGTATTTGGAAAACGGCATGATTATCATGATCGGGGCGACGACAGCCAACCCGTACCATGCGATCA
ATCCGGCGATCAGAAGCAGAACGCAGATTTTCGAGCTGCATCCGTTAGACCCTGAACAAATCAAAACGGCCATTAAACGG
GCGCTTGAAGATAAACACAGAGGCCTCGGTTCGTATGACGTTGCCGTCGATGATGAGGCGCTTGACCATTTGGCCCGCGG
CTGCGGCGGAGATGTCCGCTCAGCTTTGAATGCGCTCGAACTTGCCGTATTGTCCACAAAGGAAAACAGTGAGGGAGCGA
TACGCATTACATTGGAAATCGCAGAAGAATGCCTGCAGAAAAAAGGCTTTGTCCATGACAAAGATGGAGACGCGCATTAT
GATGTCATTTCCGCCTTCCAAAAATCAATCAGAGGCTCTGATGTCAATGCTGCACTGCACTACATGGCAAGGCTTATTGA
AGCGGGGGATTTGGAAAGCCTTGCACGGAGGCTGCTTGTTATCGCCTATGAGGATGTCGGGCTGGCGAGTCCGCAGGCTG
GTGGAAGAACGCTTCAAGCCATTCAAACGGCGGAACGAATCGGATTTCCGGAAGCGAGGATTCCGCTGGCCAACGCCGTG
ATTGAGCTCTGCCTGTCTCCTAAATCGAACTCGGCGATCCTTGCAGTTGACGAAGCGCTGTCAGACGTCCGCTCCGGAAA
GATCGGCGATGTGCCGAACCATTTAAAGGACGCCCATTACAAAGGAGCCGCTGAGCTTGGCAGAGGTGTGGAATACAAAT
ATCCGCACGATTACGAGAACGGCTGGGTCAAACAGCAGTACCTGCCTGATCCGCTGAAAAACAAAGTTTACTATCAGCCG
AAGCAGACGGGAAAATTTGAACTCGCACTGAAACAAGTATACGACAAGCTGATGAAACAAAAATAA

Domains

Predicted by InterProScan.

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (8-127)

• AAA C-terminal domain (AAA_assoc_2) (172-251)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-416)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	85.273	100	0.853