Detailed information NTG0847150

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: VM636_RS25095
• Genome accession: NZ_CP144555
• Coordinates: 5686977..5688332 (+)
• Length: 451 a.a.
• NCBI ID: WP_030422369.1
• Uniprot ID: -
• Organism: Streptomyces sp. SCSIO 75703
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 5681977..5693332

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VM636_RS25075 (VM636_25075)	-	5683001..5683819 (-)	819	WP_030422365.1	peptidylprolyl isomerase	-
VM636_RS25080 (VM636_25080)	-	5684004..5684711 (+)	708	WP_030422366.1	MBL fold metallo-hydrolase	-
VM636_RS25085 (VM636_25085)	hisS	5684725..5685987 (+)	1263	WP_030422367.1	histidine--tRNA ligase	-
VM636_RS25090 (VM636_25090)	-	5686267..5686932 (+)	666	WP_030422368.1	vitamin K epoxide reductase family protein	-
VM636_RS25095 (VM636_25095)	rarA	5686977..5688332 (+)	1356	WP_030422369.1	replication-associated recombination protein A	Machinery gene
VM636_RS25100 (VM636_25100)	rpsD	5688684..5689298 (+)	615	WP_030422370.1	30S ribosomal protein S4	-
VM636_RS25105 (VM636_25105)	-	5689342..5691600 (-)	2259	WP_338485805.1	AAA family ATPase	-
VM636_RS25110 (VM636_25110)	-	5691753..5692196 (+)	444	WP_030422372.1	DUF948 domain-containing protein	-
VM636_RS25115 (VM636_25115)	-	5692204..5692557 (+)	354	WP_053913448.1	hypothetical protein	-

Sequence

Protein

• Length: 451 a.a.
• Molecular weight: 48037.43 Da
• Isoelectric Point: 6.3793

>NTDB_id=847150 VM636_RS25095 WP_030422369.1 5686977..5688332(+) (rarA) [Streptomyces sp. SCSIO 75703]
MEPDLFTAAAEERQEKDPAGSPLAVRMRPRTLDEVVGQQHLLKPGSPLRRLVGEGAAGPAGPSSVILWGPPGTGKTTLAY
VVSKATNKRFVELSAITAGVKEVRTVIDGARRAVGGYGKETVLFLDEIHRFSKAQQDSLLPAVENRWVTLIAATTENPYF
SVISPLLSRSLLLTLEPLTDDDLRGLMRRALTAERGLGGAVTLPEDTEAHLLRIAGGDARRALTALEAAAGAALDKGEAE
IALTTLEETVDRVAVAYDRDGDQHYDVASALIKSIRGSDVDAALHYLARMIEAGEDPRFIARRLMISASEDIGLADPNAL
QIAVAAAQAVALIGFPEAALTLSHATIALALAPKSNSATTAIGAALEDVRKGLAGPVPAHLRDSHYQGAGKLGHGQGYVY
PHDLPEGIAAQQYAPDALKDRSYYTPTRHGAEARYADAVEWTRTHLGRRRS

Nucleotide

• Length: 1356 bp

>NTDB_id=847150 VM636_RS25095 WP_030422369.1 5686977..5688332(+) (rarA) [Streptomyces sp. SCSIO 75703]
GTGGAGCCCGACCTGTTCACCGCCGCAGCAGAAGAACGCCAGGAGAAGGACCCGGCCGGCAGCCCGCTCGCCGTCCGGAT
GCGTCCGCGCACCCTCGACGAGGTGGTGGGCCAGCAGCACCTGCTCAAGCCCGGCTCGCCGCTGCGCCGGCTGGTCGGCG
AAGGCGCCGCCGGCCCGGCCGGCCCCTCCTCGGTGATCCTGTGGGGCCCGCCCGGCACCGGCAAGACCACCCTGGCGTAC
GTCGTCTCCAAGGCCACCAACAAGCGCTTCGTCGAACTGTCGGCGATCACCGCGGGCGTCAAGGAGGTCCGCACGGTCAT
CGACGGCGCCCGCCGCGCCGTCGGCGGGTACGGCAAGGAGACCGTCCTCTTCCTCGACGAGATCCACCGCTTCAGCAAGG
CCCAGCAGGACTCCCTCCTCCCGGCCGTGGAGAACCGCTGGGTCACGCTCATCGCCGCCACCACCGAGAACCCCTACTTC
TCGGTGATCTCCCCGCTGCTCTCCCGCTCCCTCCTGCTCACCCTCGAACCGCTCACCGACGACGACCTGCGCGGACTCAT
GCGCCGCGCCCTCACCGCCGAGCGCGGACTGGGCGGCGCCGTCACCCTGCCCGAGGACACCGAGGCGCACCTGCTGCGCA
TCGCCGGGGGCGACGCCCGCCGGGCCCTGACCGCGCTGGAGGCCGCCGCCGGAGCCGCGCTGGACAAGGGCGAGGCCGAG
ATCGCCCTGACCACGCTGGAGGAGACCGTCGACCGGGTCGCGGTGGCCTACGACCGCGACGGCGACCAGCACTACGACGT
CGCCAGCGCCCTGATCAAGTCCATCCGGGGCTCCGACGTGGACGCCGCCCTGCACTACCTGGCGCGGATGATCGAGGCCG
GCGAGGACCCCCGCTTCATCGCCCGGCGCCTGATGATCTCCGCCAGCGAGGACATCGGCCTCGCCGACCCGAACGCCCTG
CAGATCGCGGTCGCCGCCGCCCAGGCCGTCGCCCTGATCGGCTTCCCCGAGGCCGCCCTCACGCTCAGCCACGCCACCAT
CGCCCTGGCCCTCGCCCCCAAGTCCAACTCCGCGACCACCGCCATCGGCGCCGCCCTGGAGGACGTCCGCAAGGGCCTCG
CCGGCCCCGTCCCCGCCCACCTGCGCGACAGCCACTACCAGGGCGCGGGCAAGCTGGGCCACGGCCAGGGGTACGTGTAC
CCGCACGACCTGCCCGAGGGCATCGCCGCCCAGCAGTACGCGCCGGACGCCCTGAAGGACCGCTCCTACTACACGCCGAC
CCGGCACGGCGCCGAGGCGCGGTACGCGGACGCGGTGGAGTGGACCCGTACGCACCTCGGCCGCAGGCGGTCCTGA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (200-276)

• MgsA AAA+ ATPase C terminal (MgsA_C) (277-441)

• ATPase family associated with various cellular activities (AAA) (AAA) (65-169)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	43.779	96.231	0.421