Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   QRD90_RS03850 Genome accession   NZ_CP128118
Coordinates   789349..790146 (+) Length   265 a.a.
NCBI ID   WP_048685457.1    Uniprot ID   A0AAN2PDY9
Organism   Peribacillus frigoritolerans strain LN4     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 784349..795146
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QRD90_RS03825 (QRD90_03830) - 784617..785768 (+) 1152 WP_252297266.1 thiolase family protein -
  QRD90_RS03830 (QRD90_03835) - 785900..787480 (+) 1581 WP_252297267.1 fatty acid--CoA ligase -
  QRD90_RS03835 (QRD90_03840) - 787836..788018 (-) 183 WP_034306455.1 YfhD family protein -
  QRD90_RS03840 (QRD90_03845) - 788127..788249 (-) 123 WP_081088510.1 YfhE family protein -
  QRD90_RS03845 (QRD90_03850) - 788302..789222 (-) 921 WP_252298101.1 TIGR01777 family oxidoreductase -
  QRD90_RS03850 (QRD90_03855) recX 789349..790146 (+) 798 WP_048685457.1 recombination regulator RecX Regulator
  QRD90_RS03855 (QRD90_03860) - 790223..790534 (+) 312 WP_034305394.1 YfhH family protein -
  QRD90_RS03860 (QRD90_03865) - 790576..790731 (-) 156 WP_034305387.1 small, acid-soluble spore protein K -
  QRD90_RS03865 (QRD90_03870) - 790845..791111 (+) 267 WP_034305384.1 YfhJ family protein -
  QRD90_RS03870 (QRD90_03875) - 791161..792138 (-) 978 WP_048685454.1 metal-dependent hydrolase -
  QRD90_RS03875 (QRD90_03880) mutY 792347..793465 (+) 1119 WP_252297268.1 A/G-specific adenine glycosylase -
  QRD90_RS03880 (QRD90_03885) - 793679..793903 (-) 225 WP_034305377.1 hypothetical protein -
  QRD90_RS03885 (QRD90_03890) fabL 793971..794720 (+) 750 WP_048685448.1 enoyl-[acyl-carrier-protein] reductase FabL -
  QRD90_RS03890 (QRD90_03895) - 794802..795080 (+) 279 WP_048685445.1 gamma-type small acid-soluble spore protein -

Sequence

Protein


Download         Length: 265 a.a.        Molecular weight: 31464.97 Da        Isoelectric Point: 6.9251

>NTDB_id=846079 QRD90_RS03850 WP_048685457.1 789349..790146(+) (recX) [Peribacillus frigoritolerans strain LN4]
MPNITKITTQKKRKDRYNIFVDEKYAFSVDEEVLLKFQLKKGMELDDLLLAEIQFHDEIQKAFTDALNYLSYRMRSESEI
RLYLKKKETEEPIIKEAIHKLYSFNYLDDLEFSKAYVRTHVNGGNKGPTTLKLELKEKGVQDKLIVEALKEYPYDIQIEH
ARNLAGKAVKKEKNISERALRLKVEQTLLRKGFPRDVIHEALEDVTVEKDEDEQWDSLCHHAEKMQRRYKNHEGFEYEQK
MKQALYRKGFPIELIERYLSNPDGD

Nucleotide


Download         Length: 798 bp        

>NTDB_id=846079 QRD90_RS03850 WP_048685457.1 789349..790146(+) (recX) [Peribacillus frigoritolerans strain LN4]
ATGCCAAACATAACAAAAATAACAACCCAAAAGAAACGTAAAGATCGTTATAACATCTTCGTCGACGAAAAATATGCCTT
CAGTGTAGACGAAGAAGTGCTATTGAAATTTCAGTTGAAAAAGGGTATGGAACTTGATGACCTGCTTTTGGCCGAAATAC
AATTCCATGATGAAATCCAAAAAGCTTTTACCGATGCACTTAATTATTTATCATACCGGATGCGCTCGGAATCGGAAATT
CGCCTTTATTTAAAAAAGAAGGAAACGGAAGAGCCGATCATTAAGGAAGCGATACATAAACTATACAGTTTTAACTATTT
AGACGACCTTGAATTTTCCAAGGCTTACGTACGGACCCATGTGAATGGAGGGAATAAAGGGCCCACTACCCTTAAGCTTG
AGCTTAAGGAAAAAGGGGTGCAAGATAAGTTGATTGTCGAGGCATTGAAGGAATACCCTTATGATATTCAAATTGAACAT
GCAAGGAATCTGGCTGGAAAAGCGGTCAAAAAGGAAAAAAACATTTCCGAACGAGCTTTAAGGCTGAAGGTTGAACAAAC
CTTGTTACGGAAAGGTTTCCCTAGAGATGTCATCCATGAAGCACTTGAAGATGTGACGGTTGAAAAGGATGAGGATGAAC
AATGGGATTCCCTTTGCCACCATGCCGAAAAAATGCAACGCCGATATAAAAACCATGAAGGCTTCGAATATGAACAAAAA
ATGAAGCAGGCATTATACCGAAAAGGTTTTCCAATAGAATTGATTGAGCGTTATCTTTCCAATCCTGATGGGGATTAA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

49.421

97.736

0.483