Detailed information NTG0084538

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: JQN53_RS02270
• Genome accession: NZ_AP024301
• Coordinates: 414020..414934 (-)
• Length: 304 a.a.
• NCBI ID: WP_011227933.1
• Uniprot ID: -
• Organism: Thermus thermophilus strain HB5002
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 409020..419934

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JQN53_RS02240 (TthHB5002_04450)	hisH	409650..410246 (+)	597	WP_024119973.1	imidazole glycerol phosphate synthase subunit HisH	-
JQN53_RS02245 (TthHB5002_04460)	-	410217..411137 (-)	921	WP_011172520.1	carbohydrate kinase family protein	-
JQN53_RS02250 (TthHB5002_04470)	guaB	411282..412763 (+)	1482	WP_011227931.1	IMP dehydrogenase	-
JQN53_RS02255 (TthHB5002_04480)	-	412760..412990 (-)	231	WP_011172522.1	hypothetical protein	-
JQN53_RS02260 (TthHB5002_04490)	-	413031..413516 (+)	486	WP_203971633.1	hypothetical protein	-
JQN53_RS02265 (TthHB5002_04500)	-	413461..413886 (-)	426	WP_203971635.1	disulfide bond formation protein B	-
JQN53_RS02270 (TthHB5002_04510)	pilA	414020..414934 (-)	915	WP_011227933.1	signal recognition particle-docking protein FtsY	Machinery gene
JQN53_RS02275 (TthHB5002_04520)	-	414934..415374 (-)	441	WP_024119322.1	hypothetical protein	-
JQN53_RS02280 (TthHB5002_04530)	gltX	415391..416797 (-)	1407	WP_203971639.1	glutamate--tRNA ligase	-
JQN53_RS02285 (TthHB5002_04540)	lptB	416852..417580 (+)	729	WP_011172528.1	LPS export ABC transporter ATP-binding protein	-
JQN53_RS11750 (TthHB5002_04550)	-	417583..418926 (+)	1344	WP_259331156.1	DUF3084 domain-containing protein	-
JQN53_RS11755	prmC	418828..419721 (-)	894	Protein_441	peptide chain release factor N(5)-glutamine methyltransferase	-

Sequence

Protein

• Length: 304 a.a.
• Molecular weight: 32721.17 Da
• Isoelectric Point: 9.7124

>NTDB_id=84538 JQN53_RS02270 WP_011227933.1 414020..414934(-) (pilA) [Thermus thermophilus strain HB5002]
MGLFDRLRAGLAKTRERLLKAIPWGGDPEEVLEELEMALLAADVGVAATEELLKEVRASGRRDLKEVVKEKLVQMLEPDE
RRATLRKLGFRPQKLRPVEPQGHVVMVVGVNGVGKTTTIAKLGRLYQGLGKKVLFCAGDTFRAAGGAQLAEWGKRLGIPV
IQGPEGADPAALAFDAAKARRARGLDLLFVDTAGRLHTKQGLMEELKKVKRAIAKADPGEPGEVWLVLDAVTGQNGLEQA
KRFHEAVGLTGVIVTKLDGTAKGGVLVPIVRTLKVPIRFIGVGEGPDDLQPFDAEAFVEALLEA

Nucleotide

• Length: 915 bp

>NTDB_id=84538 JQN53_RS02270 WP_011227933.1 414020..414934(-) (pilA) [Thermus thermophilus strain HB5002]
ATGGGCCTCTTTGACCGGCTCAGGGCGGGCCTCGCCAAGACCCGGGAAAGGCTCCTCAAGGCCATCCCCTGGGGCGGCGA
CCCCGAGGAGGTCCTGGAGGAGCTGGAGATGGCCCTCCTCGCCGCCGACGTGGGGGTGGCGGCCACGGAGGAGCTCCTCA
AGGAGGTGCGGGCCTCGGGGCGGCGGGACCTGAAGGAGGTGGTGAAGGAGAAGCTCGTCCAGATGCTGGAGCCGGACGAG
CGGCGGGCCACGCTGAGGAAGCTCGGCTTCCGTCCCCAGAAGCTCCGCCCCGTGGAGCCTCAGGGGCACGTGGTGATGGT
GGTGGGGGTGAACGGGGTGGGCAAGACCACCACCATCGCCAAGCTGGGCCGCCTCTACCAGGGCCTCGGCAAGAAGGTCC
TCTTCTGCGCCGGGGACACCTTCCGCGCCGCGGGGGGAGCCCAGCTCGCGGAGTGGGGGAAGCGCCTCGGGATCCCGGTG
ATCCAGGGCCCCGAGGGGGCGGACCCCGCCGCCCTCGCCTTTGACGCCGCCAAGGCCCGAAGGGCGCGGGGCCTGGACCT
CCTCTTCGTGGACACCGCGGGCCGCCTCCACACCAAGCAGGGCCTCATGGAGGAGCTCAAGAAGGTGAAGCGGGCCATCG
CCAAGGCGGACCCCGGGGAGCCGGGGGAGGTGTGGCTCGTGCTGGACGCCGTCACCGGGCAGAACGGCCTGGAGCAGGCC
AAGCGCTTCCACGAGGCCGTGGGCCTCACCGGGGTCATCGTCACCAAGCTGGACGGGACGGCCAAGGGCGGGGTCCTGGT
CCCCATCGTCCGCACCCTAAAGGTGCCCATCCGCTTCATCGGCGTGGGAGAAGGCCCGGACGACCTCCAGCCCTTTGACG
CCGAGGCCTTCGTGGAGGCCCTCCTCGAGGCCTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (29-65)

• SRP54-type protein, GTPase domain (SRP54) (103-302)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	48.726	100	0.503