Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   QRY57_RS06590 Genome accession   NZ_CP127376
Coordinates   976565..978442 (-) Length   625 a.a.
NCBI ID   WP_286016982.1    Uniprot ID   -
Organism   Bacillus arachidis strain YX15     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 971565..983442
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QRY57_RS06580 (QRY57_06585) - 971825..974413 (+) 2589 WP_286016981.1 SNF2-related protein -
  QRY57_RS26980 - 975165..975926 (+) 762 WP_349775673.1 ATP-binding cassette domain-containing protein -
  QRY57_RS26985 - 975995..976408 (+) 414 WP_349775676.1 ATP-binding cassette domain-containing protein -
  QRY57_RS06590 (QRY57_06595) rcrQ 976565..978442 (-) 1878 WP_286016982.1 ABC transporter ATP-binding protein Regulator
  QRY57_RS06595 (QRY57_06600) - 978439..980685 (-) 2247 WP_286016983.1 ABC transporter ATP-binding protein -
  QRY57_RS06600 (QRY57_06605) - 981146..982006 (+) 861 WP_286016984.1 DnaD domain protein -
  QRY57_RS06605 (QRY57_06610) dnaB 982003..983286 (+) 1284 WP_286016985.1 replicative DNA helicase -

Sequence

Protein


Download         Length: 625 a.a.        Molecular weight: 69170.16 Da        Isoelectric Point: 6.9842

>NTDB_id=843770 QRY57_RS06590 WP_286016982.1 976565..978442(-) (rcrQ) [Bacillus arachidis strain YX15]
MSEKKVEHNKQGGPGGGHGGGHMGGGMRKIEKAKNFKGTMNKLLQYLKPYKLSILIVILFAIGSAAFAIVGPKILGKATT
KLFEGLVDKVTGVHGAAIDFTYIGNIVILLLGLYIASTAFGIIQGYIISGVAQKVSYNFRKEIDEKINRMPLNYFDKTTH
GEVLSRITNDVDTVSQTLNQSMSQIITSVITIIGVFIMMLSISWQMTLVALLILPVSMILIMAVVKRSQKYFKSQQEYLG
HVNGQVEEIYSGHNIVKAFNTEEEEVKKFEKVNDTLYHSAWKSQFLSGMMMPIMMFIGNIGYVAVSILGGWLAAKRTIAV
GDILAFVQYVRNFTQPIAQVAQIANVLQSTAAAAERVFEFLEEEEEMPESENPVKLQKVNGEVTFKDVQFGYNPDKIIIN
NFSANIKPGQKVAIVGPTGAGKTTIVKLLMRFYDVNSGAICIDGHDIKDFTREDLRSMFGMVLQDTWLFNGSIMENIRYG
RLGATDEEVIEAAKAAHVHSFVKTLPNRYNMELNEEASNVSQGQKQLLTIARALLADPKILILDEATSSIDTRTEVLIQK
AMENLMEGRTSFIIAHRLSTIRDADLILVMKDGDIVEQGNHEELLKAKGFYASLYNSQFEGADAS

Nucleotide


Download         Length: 1878 bp        

>NTDB_id=843770 QRY57_RS06590 WP_286016982.1 976565..978442(-) (rcrQ) [Bacillus arachidis strain YX15]
ATGAGTGAGAAAAAAGTAGAACATAATAAACAAGGTGGTCCTGGTGGTGGCCATGGCGGCGGTCATATGGGCGGCGGCAT
GCGAAAGATTGAGAAGGCAAAAAATTTCAAGGGAACGATGAATAAGCTCCTTCAATACTTGAAGCCCTATAAATTATCAA
TCTTAATCGTTATCCTTTTCGCAATCGGTAGTGCCGCCTTCGCAATCGTCGGTCCAAAGATTTTAGGTAAGGCGACAACA
AAACTTTTCGAAGGACTCGTAGACAAAGTAACAGGCGTGCACGGTGCCGCCATTGACTTTACCTATATCGGAAACATCGT
TATTTTACTCCTTGGATTATATATAGCGAGCACTGCGTTTGGTATTATCCAAGGATATATCATTTCAGGAGTCGCACAAA
AGGTATCTTATAACTTTAGAAAAGAAATTGATGAAAAGATCAACCGGATGCCGCTGAATTACTTTGATAAAACAACGCAC
GGAGAAGTATTATCTAGAATTACGAATGACGTAGATACTGTGAGCCAAACTTTAAATCAAAGTATGTCGCAAATCATCAC
ATCCGTTATTACCATCATCGGTGTATTCATCATGATGTTATCAATCAGTTGGCAAATGACATTAGTCGCGCTCTTAATCT
TGCCAGTATCCATGATACTTATCATGGCAGTCGTAAAACGATCACAAAAATACTTCAAATCCCAACAAGAATATTTAGGA
CACGTTAACGGTCAGGTGGAAGAAATTTATAGTGGTCACAATATTGTAAAAGCTTTTAACACTGAAGAAGAAGAAGTGAA
AAAATTCGAAAAGGTGAATGATACTCTTTACCACTCTGCATGGAAATCTCAATTTTTATCTGGAATGATGATGCCGATTA
TGATGTTTATCGGGAATATCGGTTACGTCGCTGTCTCGATTTTAGGCGGCTGGCTTGCGGCAAAGAGAACCATCGCAGTT
GGAGATATTCTAGCCTTTGTACAATATGTAAGAAACTTTACGCAGCCAATCGCTCAAGTAGCGCAAATCGCGAACGTACT
CCAATCCACTGCTGCTGCTGCAGAACGAGTCTTCGAATTTTTAGAAGAAGAAGAGGAAATGCCAGAATCAGAAAATCCAG
TGAAGCTGCAAAAAGTAAACGGAGAAGTTACCTTCAAAGATGTTCAATTTGGATACAATCCAGATAAGATCATCATCAAT
AACTTCTCAGCTAACATTAAGCCTGGACAAAAAGTAGCAATCGTCGGACCAACCGGGGCTGGTAAAACAACAATCGTCAA
ACTATTAATGCGTTTCTATGACGTAAACAGCGGTGCGATCTGTATAGACGGTCACGACATAAAAGACTTCACGCGCGAAG
ACCTGCGCAGTATGTTTGGTATGGTACTGCAAGACACATGGCTATTTAACGGCTCCATCATGGAAAACATACGTTACGGT
AGACTGGGTGCGACTGACGAAGAAGTAATTGAAGCAGCGAAAGCAGCCCACGTTCACAGCTTCGTAAAAACCTTACCAAA
TAGATACAACATGGAACTAAACGAAGAAGCAAGCAACGTATCCCAAGGACAAAAGCAGTTATTAACAATTGCCCGTGCCC
TTCTAGCGGATCCGAAAATACTCATACTCGACGAAGCAACAAGCTCTATCGACACTCGTACAGAAGTACTGATTCAAAAA
GCGATGGAAAACCTCATGGAAGGCCGAACAAGCTTCATCATCGCTCACAGATTATCAACAATCCGTGATGCGGATTTAAT
CCTTGTTATGAAAGACGGGGATATTGTAGAACAAGGTAATCATGAAGAGTTATTGAAGGCTAAAGGGTTCTATGCTTCGC
TTTATAATAGTCAGTTTGAAGGTGCGGATGCTTCGTGA

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(54-336)

ABC transporter (ABC_tran)

(400-548)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

51.63

93.28

0.482