Detailed information NTG0841652

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: QMC72_RS01850
• Genome accession: NZ_CP127095
• Coordinates: 360114..362510 (+)
• Length: 798 a.a.
• NCBI ID: WP_133486688.1
• Uniprot ID: -
• Organism: Bacillus inaquosorum strain LBA001
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 355114..367510

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QMC72_RS01825 (QMC72_01825)	-	355196..356461 (-)	1266	WP_284106965.1	replication-associated recombination protein A	-
QMC72_RS01830 (QMC72_01830)	cymR	356663..357079 (+)	417	WP_003225879.1	cysteine metabolism transcriptional regulator CymR	-
QMC72_RS01835 (QMC72_01835)	-	357098..358240 (+)	1143	WP_284106964.1	cysteine desulfurase family protein	-
QMC72_RS01840 (QMC72_01840)	mnmA	358268..359383 (+)	1116	WP_003237485.1	tRNA 2-thiouridine(34) synthase MnmA	-
QMC72_RS01845 (QMC72_01845)	-	359469..360089 (+)	621	WP_232919234.1	tetratricopeptide repeat protein	-
QMC72_RS01850 (QMC72_01850)	recD2	360114..362510 (+)	2397	WP_133486688.1	ATP-dependent RecD-like DNA helicase	Machinery gene
QMC72_RS01855 (QMC72_01855)	-	362567..363091 (+)	525	WP_080429038.1	PRC-barrel domain-containing protein	-
QMC72_RS01860 (QMC72_01860)	-	363103..363294 (+)	192	WP_003225893.1	hypothetical protein	-
QMC72_RS01865 (QMC72_01865)	-	363316..363447 (+)	132	WP_003225895.1	YrzQ family protein	-
QMC72_RS01870 (QMC72_01870)	-	363483..364139 (-)	657	WP_284106963.1	amino acid ABC transporter permease	-
QMC72_RS01875 (QMC72_01875)	-	364156..364806 (-)	651	WP_284106962.1	amino acid ABC transporter permease	-
QMC72_RS01880 (QMC72_01880)	glnH	364867..365688 (-)	822	WP_284106961.1	glutamine ABC transporter substrate-binding protein GlnH	-
QMC72_RS01885 (QMC72_01885)	-	365710..366438 (-)	729	WP_148982077.1	amino acid ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 798 a.a.
• Molecular weight: 89185.86 Da
• Isoelectric Point: 5.0321

>NTDB_id=841652 QMC72_RS01850 WP_133486688.1 360114..362510(+) (recD2) [Bacillus inaquosorum strain LBA001]
MQQHPDQLKLEEEPYLKGTVNTVIYHNDTNLYTVLKVKVTETSEAIEDKAVSVTGYFPALQEEETYTFYGKIVTHPKFGL
QFQAEHFKKEIPTTKEGIIQYLSSDLFEGIGKKTAEEIVKKLGDSAINKILADASVLYDVPKLSKKKADMLAGALQRHQG
LEQIMISLNQFGFGPQLSMKIYQAYESETLEKIQENPYQLVKDVEGIGFGKADELGSRMGLSGNHPERVKAAILYTLETT
CLSEGHTYIETEKLIIDTQSLLNQSAREGQRITEMDAANAIIALGENKDIVIEDGRCYFPSLFYAEQNVAKRVKHIASQT
EYDDQFPESEFLLALGELEERMNVQYAPSQKEAIQKALSSPMLLLTGGPGTGKTTVIRGIVELYGELHGVSLDPSAYKKD
EAFPVVLAAPTGRAAKRMSESTGLPAVTIHRLLGWNGAEGFTHTEDEPIEGKLLIIDEASMLDIWLANHLFKAIPDHIQI
IIVGDEDQLPSVGPGQVLRDLLASQVIPTVRLTDIYRQAEGSSIVELAHQMKNGLLPNNLTAPTKDRSFIRCGGSQIKEV
VEKVVANALKKGYTAKDIQVLAPMYRGKAGINELNVMLQDILNPPREKRREIKFGDVVYRTGDKILQLVNQPENNVFNGD
IGEITSIFYAKENTEKEDMAVVSFDGNEMTFTKKDFNQFTHAYCCSIHKSQGSEFPIVVLPVVKGYYRMLRRNLLYTAIT
RAKKFLILCGEEEALEWGVKNNDATVRQTSLKNRLSLQVEEMDAELEALQKELPFSVHDANIGMEGITPFDFMKEEQL

Nucleotide

• Length: 2397 bp

>NTDB_id=841652 QMC72_RS01850 WP_133486688.1 360114..362510(+) (recD2) [Bacillus inaquosorum strain LBA001]
GTGCAGCAACATCCGGATCAGCTTAAACTGGAGGAAGAGCCCTATTTAAAAGGGACAGTCAACACAGTCATCTATCATAA
TGACACCAATTTATATACGGTTCTGAAAGTGAAAGTCACAGAGACCTCCGAAGCTATTGAAGATAAAGCCGTATCCGTGA
CGGGCTACTTCCCTGCGCTTCAAGAAGAAGAGACCTACACGTTTTACGGAAAGATCGTAACCCATCCAAAATTCGGGCTC
CAATTTCAGGCGGAGCATTTCAAAAAGGAGATTCCGACGACTAAGGAAGGCATCATTCAATATTTATCGAGTGATTTGTT
CGAGGGAATCGGCAAAAAAACAGCCGAGGAAATTGTGAAAAAGCTGGGCGACAGCGCTATTAATAAAATATTGGCTGACG
CTTCAGTGCTTTATGACGTTCCCAAGCTGTCAAAAAAGAAAGCTGATATGCTGGCCGGCGCCTTGCAGCGTCATCAGGGA
CTGGAGCAAATCATGATTTCCCTGAATCAGTTTGGTTTCGGCCCTCAGCTGTCTATGAAAATCTACCAAGCCTATGAATC
CGAGACGCTTGAAAAGATTCAGGAAAACCCTTATCAGCTTGTGAAAGATGTAGAAGGCATCGGATTTGGGAAAGCGGATG
AGCTGGGCAGCAGAATGGGCCTTTCGGGTAATCACCCTGAGCGGGTAAAAGCCGCCATATTGTACACGCTTGAAACGACT
TGTCTGTCAGAAGGGCATACGTACATAGAAACGGAGAAGCTGATTATTGACACCCAATCTCTGTTAAATCAATCAGCTCG
GGAGGGGCAGCGCATCACTGAAATGGATGCCGCTAACGCGATTATTGCCCTTGGAGAAAATAAAGACATTGTCATAGAAG
ATGGCCGCTGTTATTTTCCATCGCTGTTTTACGCTGAACAAAATGTTGCTAAGCGAGTGAAACATATCGCAAGCCAAACT
GAATATGATGACCAGTTTCCCGAATCAGAATTTCTGCTCGCTTTAGGAGAACTGGAAGAACGGATGAACGTTCAGTATGC
CCCTAGCCAGAAGGAAGCGATTCAAAAAGCCCTTTCCTCACCGATGCTTCTTTTAACGGGGGGACCGGGAACAGGGAAAA
CGACGGTAATCAGAGGGATTGTCGAACTGTACGGAGAGCTTCACGGTGTGTCACTCGACCCGTCAGCGTATAAAAAGGAT
GAAGCTTTTCCGGTTGTATTGGCCGCACCGACAGGAAGAGCGGCGAAACGGATGAGTGAATCAACGGGGCTTCCGGCAGT
GACGATTCACAGGCTGCTTGGCTGGAACGGCGCTGAAGGATTTACCCATACAGAGGATGAGCCGATTGAAGGGAAGCTGT
TAATAATCGATGAAGCCAGCATGCTTGATATATGGCTGGCGAACCATTTGTTCAAGGCGATCCCTGATCATATTCAAATC
ATCATTGTCGGTGACGAAGATCAGCTGCCTTCTGTCGGTCCGGGCCAAGTGCTGAGAGACCTTTTGGCATCCCAGGTGAT
ACCGACTGTGAGACTGACAGACATCTACCGCCAGGCGGAGGGTTCATCGATTGTCGAGCTTGCCCACCAAATGAAAAATG
GGTTGCTGCCAAACAATTTGACTGCCCCGACGAAGGACCGTTCCTTTATTCGCTGCGGAGGCTCGCAAATTAAAGAGGTA
GTTGAGAAGGTTGTCGCCAATGCATTGAAAAAAGGCTATACGGCAAAGGACATTCAGGTTCTCGCCCCGATGTACAGAGG
AAAAGCTGGGATCAATGAACTGAATGTGATGCTGCAGGACATTTTGAATCCTCCTAGAGAAAAACGGAGGGAAATAAAGT
TCGGGGATGTTGTCTACAGAACCGGAGATAAAATTTTGCAGCTCGTCAATCAGCCGGAAAACAATGTGTTCAACGGAGAC
ATTGGTGAAATTACGTCGATATTTTATGCGAAGGAAAATACAGAAAAAGAAGATATGGCCGTCGTATCTTTTGACGGCAA
TGAAATGACATTTACGAAAAAAGATTTTAACCAGTTTACTCATGCGTATTGCTGCTCTATTCATAAATCGCAGGGAAGTG
AATTTCCGATTGTGGTTTTGCCTGTTGTGAAAGGCTATTATAGAATGCTCAGAAGAAACCTTCTTTATACCGCTATTACA
AGAGCAAAGAAATTTCTCATTTTATGCGGAGAAGAGGAAGCGCTGGAGTGGGGCGTGAAAAATAACGACGCAACTGTCAG
ACAGACTTCTTTGAAAAACAGGCTGTCATTACAGGTTGAGGAAATGGATGCTGAGCTTGAAGCTTTGCAAAAGGAGCTCC
CATTCAGCGTACACGATGCCAATATTGGCATGGAAGGCATTACACCATTCGATTTTATGAAAGAAGAACAGCTGTAA

Domains

Predicted by InterproScan.

• UvrD-like helicase C-terminal domain (UvrD_C_2) (681-729)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (594-662)

• AAA domain (AAA_30) (346-553)

• Helix-hairpin-helix containing domain (HHH_RecD2) (158-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	98.62	99.875	0.985