Detailed information NTG0840924

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: VKP34_RS08295
• Genome accession: NZ_CP142358
• Coordinates: 1641922..1643190 (+)
• Length: 422 a.a.
• NCBI ID: WP_136112248.1
• Uniprot ID: -
• Organism: Streptococcus pyogenes strain 6702-99
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1636922..1648190

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VKP34_RS08280 (VKP34_08280)	-	1637376..1639348 (+)	1973	Protein_1580	amidase family protein	-
VKP34_RS08285 (VKP34_08285)	pabB	1639533..1641290 (+)	1758	WP_136112249.1	aminodeoxychorismate synthase component I	-
VKP34_RS08290 (VKP34_08290)	-	1641323..1641889 (+)	567	WP_111702311.1	aminodeoxychorismate/anthranilate synthase component II	-
VKP34_RS08295 (VKP34_08295)	rarA	1641922..1643190 (+)	1269	WP_136112248.1	replication-associated recombination protein A	Machinery gene
VKP34_RS08310 (VKP34_08310)	-	1643782..1644465 (+)	684	WP_136112247.1	exotoxin beta-grasp domain-containing protein	-
VKP34_RS08315 (VKP34_08315)	-	1645195..1646823 (+)	1629	WP_002993593.1	ABC transporter substrate-binding protein	-
VKP34_RS08320 (VKP34_08320)	-	1646936..1647913 (+)	978	WP_023611300.1	ABC transporter permease	-

Sequence

Protein

• Length: 422 a.a.
• Molecular weight: 46657.12 Da
• Isoelectric Point: 6.3774

>NTDB_id=840924 VKP34_RS08295 WP_136112248.1 1641922..1643190(+) (rarA) [Streptococcus pyogenes strain 6702-99]
MPDHLALRMRPKTISEVIGQKHLVGEGKIIRRMVEANRLSSMILYGPPGIGKTSIASAIAGTTRYAFRTFNATIDSKKRL
QEIAEEAKFSGGLVLLLDEIHRLDKTKQDFLLPLLENGTIIMIGATTENPFFSVTPAIRSRVQIFELEPLSNEDIKTAIQ
LAISDKERGFPFLVTIDDEALDFIVTATNGDLRSAYNSLDLAVMSTSPNEDSSRHISLETMENSLQRSYITMDKNGDGHY
DVLSALQKAIRGSDVNASLHYAARLVEAGDLPSLVRRLTIIAYEDIGLANPDAQVHTVTALDAAQRIGFPEARILIANVV
IDLALSPKSNSAYLAMDAALADLRTSGNLPIPRHLRDGHYAGSKDLGNAKDYLYPHAYPEKWVKQQYLPDKLVGHHYFEA
NETGKYERALGSNKERIDKLSD

Nucleotide

• Length: 1269 bp

>NTDB_id=840924 VKP34_RS08295 WP_136112248.1 1641922..1643190(+) (rarA) [Streptococcus pyogenes strain 6702-99]
ATGCCTGATCATTTAGCGCTCAGAATGCGTCCCAAAACCATTTCAGAGGTCATCGGACAAAAACACCTTGTTGGCGAAGG
CAAAATCATCCGTCGCATGGTGGAAGCAAATAGACTATCGTCCATGATCCTCTATGGCCCTCCAGGAATCGGTAAAACTT
CCATTGCTTCTGCTATTGCTGGTACTACTAGATATGCCTTTCGGACCTTTAATGCCACCATTGACAGCAAAAAACGTCTC
CAAGAAATTGCGGAAGAAGCTAAATTTTCTGGTGGCTTGGTATTATTACTAGACGAGATTCATCGCCTTGACAAGACAAA
ACAAGATTTTCTTTTACCTTTACTTGAGAATGGCACCATTATCATGATTGGCGCAACCACTGAGAACCCCTTCTTTTCAG
TGACCCCCGCTATCAGAAGCAGGGTCCAGATTTTTGAATTGGAACCACTTTCTAACGAGGATATTAAAACAGCCATTCAG
CTAGCAATTTCCGACAAAGAACGGGGATTTCCTTTTTTAGTGACAATTGATGATGAGGCGCTAGATTTCATTGTTACCGC
CACAAATGGAGACCTACGATCTGCTTATAATTCCTTGGATCTAGCAGTCATGTCTACTTCTCCTAATGAAGATAGTAGCC
GTCATATTAGTCTAGAGACAATGGAAAATAGTCTGCAGCGTAGTTATATTACCATGGATAAAAACGGGGACGGGCATTAT
GATGTGCTATCAGCCCTCCAAAAAGCTATTCGCGGCTCCGATGTCAATGCCAGCCTGCACTACGCCGCTCGTTTAGTAGA
AGCTGGAGACTTGCCTAGTTTAGTAAGACGATTGACCATTATTGCTTACGAAGATATTGGCTTAGCCAACCCTGACGCCC
AAGTTCATACCGTCACCGCACTAGATGCCGCCCAACGCATTGGTTTTCCAGAAGCTCGTATTCTTATCGCTAACGTGGTC
ATTGATTTGGCTCTATCACCTAAATCCAATTCAGCTTATTTAGCTATGGATGCAGCTTTAGCTGATTTGAGAACATCAGG
TAACCTCCCCATTCCAAGGCATCTTAGAGACGGGCATTATGCTGGCAGCAAGGACCTAGGCAATGCCAAAGATTACCTCT
ACCCACACGCCTACCCTGAAAAATGGGTCAAACAACAATACCTACCAGATAAATTAGTAGGACATCATTATTTTGAAGCC
AATGAAACCGGTAAATACGAACGCGCACTTGGTTCAAATAAAGAGCGTATTGATAAGCTCTCAGACTGA

Domains

Predicted by InterProScan.

• ATPase family associated with various cellular activities (AAA) (AAA) (42-144)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-415)

• AAA C-terminal domain (AAA_assoc_2) (174-251)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	59.233	98.815	0.585