Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   F6I26_RS08995 Genome accession   NZ_CP126961
Coordinates   1755644..1757404 (-) Length   586 a.a.
NCBI ID   WP_070241960.1    Uniprot ID   A0A1F0RD48
Organism   Streptococcus anginosus strain UMB4708     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1750644..1762404
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  F6I26_RS08975 (F6I26_008975) - 1751325..1753172 (-) 1848 WP_024052684.1 APC family permease -
  F6I26_RS08980 (F6I26_008980) manA 1753439..1754383 (-) 945 WP_024052685.1 mannose-6-phosphate isomerase, class I -
  F6I26_RS08985 (F6I26_008985) - 1754414..1755140 (-) 727 Protein_1731 GntR family transcriptional regulator -
  F6I26_RS08990 (F6I26_008990) - 1755174..1755299 (-) 126 Protein_1732 PTS cellobiose transporter subunit IIC -
  F6I26_RS08995 (F6I26_008995) rcrQ 1755644..1757404 (-) 1761 WP_070241960.1 ABC transporter ATP-binding protein Regulator
  F6I26_RS09000 (F6I26_009000) rcrP 1757394..1759160 (-) 1767 WP_024052690.1 ABC transporter ATP-binding protein Regulator
  F6I26_RS09005 (F6I26_009005) - 1759153..1759611 (-) 459 WP_024052691.1 MarR family winged helix-turn-helix transcriptional regulator -
  F6I26_RS09010 (F6I26_009010) - 1759768..1760178 (-) 411 WP_070241961.1 peptide deformylase -
  F6I26_RS09015 (F6I26_009015) scrK 1760246..1761145 (-) 900 WP_150888049.1 fructokinase ScrK -

Sequence

Protein


Download         Length: 586 a.a.        Molecular weight: 64889.94 Da        Isoelectric Point: 6.3561

>NTDB_id=840800 F6I26_RS08995 WP_070241960.1 1755644..1757404(-) (rcrQ) [Streptococcus anginosus strain UMB4708]
MENKKSSLFSQVKPYLKGFQLPLLIAFVGAAVSSIITVYGPDKLKEITNLITEGMRSQIDLKSISNIALFLAILYAAGAL
LNYVQSFIISSVIQHFSKRLRTAIAEKINKLPLRYFDSHSQGDTLSRVTNDVDTVGQSLNQSLGTVISSSLLLIAVLFMM
FYNNVVLSFVTISSVLIGFVFVALIMGKSQRFFRAQQENLASVNGYVEEMYSGHNVIVSYNATDESKVAFQTLNTNLYNS
MWKSQFISGIMMPLMMFVGNFGYVMVVLVGASMALNGDVTMGTIVAFMVYVRIFSQPLSQIAQGITTLQQASAAMGRVFE
FLAEPEMENDEHKAQQLTTLKGDVAFDKVFFGYNPDRTIIHDFSANAKAGQKIAIVGPTGAGKTTIVNLLMKFYEIDKGR
ITIDGVDTKQMKRSEVHDAFSMVLQDTWLFEGTIKENLIYNQKNISDEAVVAAAKAVGVHHFIKTLPKGYDTVLDDTVSL
SVGQKQLLTIARALLKDAPLLILDEATSSVDTRTEELIQKAMDKLMEGRTSFVIAHRLSTIRNADLILVMRDGNIIEQGN
HDQLMGKNGFYADLYNSQFDEDAEYA

Nucleotide


Download         Length: 1761 bp        

>NTDB_id=840800 F6I26_RS08995 WP_070241960.1 1755644..1757404(-) (rcrQ) [Streptococcus anginosus strain UMB4708]
ATGGAAAATAAAAAATCGTCTTTATTTAGCCAAGTGAAACCTTATCTCAAAGGTTTTCAGCTTCCATTGCTCATTGCATT
TGTGGGAGCGGCAGTGTCTAGTATTATTACGGTTTATGGACCGGACAAATTAAAAGAAATTACCAACCTTATCACAGAGG
GGATGCGAAGTCAGATTGATTTGAAATCAATCTCCAACATTGCTCTTTTCTTAGCGATTTTGTACGCAGCAGGTGCTTTG
TTAAATTATGTTCAATCTTTTATCATTTCATCTGTTATTCAGCATTTCTCCAAGCGCTTGCGGACTGCTATTGCTGAAAA
AATCAATAAATTGCCTCTACGCTATTTTGACAGCCATTCCCAAGGGGACACTCTTTCACGGGTCACAAATGACGTGGATA
CTGTTGGGCAATCTTTGAACCAAAGTTTAGGAACGGTGATTTCATCAAGTTTACTGCTTATTGCGGTTCTCTTTATGATG
TTTTACAATAATGTGGTCTTGTCCTTTGTAACGATTAGCTCAGTCTTGATTGGCTTTGTCTTTGTTGCTTTGATTATGGG
AAAATCTCAACGATTCTTCCGAGCACAACAAGAAAATCTTGCCAGCGTCAATGGCTATGTGGAAGAAATGTACTCTGGGC
ATAATGTCATTGTCAGCTACAATGCCACAGACGAATCCAAAGTAGCCTTTCAAACACTTAATACTAACCTTTACAACAGT
ATGTGGAAATCACAATTCATTTCAGGGATTATGATGCCGCTTATGATGTTTGTAGGGAACTTCGGTTACGTTATGGTTGT
TTTGGTTGGAGCGAGCATGGCCTTGAATGGCGATGTCACTATGGGAACTATTGTTGCTTTTATGGTATATGTACGGATTT
TCTCTCAACCGTTGTCACAAATTGCACAAGGGATTACTACTCTTCAACAAGCTAGCGCTGCTATGGGACGCGTATTTGAA
TTTTTAGCAGAGCCTGAAATGGAAAATGATGAACACAAAGCGCAACAACTCACGACCCTAAAAGGAGATGTTGCCTTTGA
TAAGGTATTCTTTGGTTATAATCCAGATCGAACGATTATTCATGATTTCTCTGCCAATGCAAAAGCAGGACAAAAAATTG
CCATTGTCGGCCCGACCGGTGCTGGGAAGACGACCATTGTTAACTTGCTCATGAAATTTTATGAGATTGATAAGGGACGC
ATTACAATTGACGGTGTTGATACGAAGCAAATGAAACGTTCTGAGGTACACGATGCCTTCTCCATGGTTCTCCAAGACAC
CTGGTTATTTGAGGGAACGATTAAGGAAAATTTGATTTACAATCAGAAAAATATTTCTGACGAAGCAGTTGTGGCAGCTG
CCAAAGCTGTTGGGGTTCATCACTTCATCAAGACTTTGCCAAAAGGATACGATACGGTGCTGGACGATACAGTAAGCCTT
TCTGTGGGGCAAAAGCAATTGTTGACCATTGCGCGTGCACTTCTTAAGGATGCTCCCTTACTTATCTTGGATGAAGCGAC
TTCATCTGTTGATACGCGGACAGAAGAATTGATCCAAAAAGCGATGGATAAGTTGATGGAGGGAAGGACTTCTTTCGTCA
TTGCTCACCGCTTGTCGACCATTCGTAATGCTGATTTGATTTTGGTCATGCGTGATGGTAATATCATTGAACAAGGAAAT
CACGATCAATTGATGGGAAAAAATGGCTTCTATGCTGATCTTTACAATAGTCAATTCGATGAAGACGCAGAGTATGCGTA
A

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(361-508)

ABC transporter transmembrane region (ABC_membrane)

(23-298)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1F0RD48

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

72.509

99.317

0.72