Detailed information NTG0840449

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: VKP39_RS07745
• Genome accession: NZ_CP142353
• Coordinates: 1561130..1562398 (+)
• Length: 422 a.a.
• NCBI ID: WP_109828860.1
• Uniprot ID: -
• Organism: Streptococcus pyogenes strain D641
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1556130..1567398

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VKP39_RS07730 (VKP39_07730)	-	1556583..1558556 (+)	1974	WP_326623853.1	amidase family protein	-
VKP39_RS07735 (VKP39_07735)	pabB	1558741..1560498 (+)	1758	WP_326623854.1	aminodeoxychorismate synthase component I	-
VKP39_RS07740 (VKP39_07740)	-	1560531..1561097 (+)	567	WP_109828861.1	aminodeoxychorismate/anthranilate synthase component II	-
VKP39_RS07745 (VKP39_07745)	rarA	1561130..1562398 (+)	1269	WP_109828860.1	replication-associated recombination protein A	Machinery gene
VKP39_RS07760 (VKP39_07760)	smeZ	1562970..1563671 (+)	702	WP_109828641.1	streptococcal mitogenic exotoxin SmeZ	-
VKP39_RS07765 (VKP39_07765)	-	1564087..1564221 (-)	135	WP_011018269.1	hypothetical protein	-
VKP39_RS07770 (VKP39_07770)	-	1564400..1566028 (+)	1629	WP_109828859.1	ABC transporter substrate-binding protein	-
VKP39_RS07775 (VKP39_07775)	-	1566141..1567118 (+)	978	WP_109828858.1	ABC transporter permease	-

Sequence

Protein

• Length: 422 a.a.
• Molecular weight: 46641.12 Da
• Isoelectric Point: 6.3774

>NTDB_id=840449 VKP39_RS07745 WP_109828860.1 1561130..1562398(+) (rarA) [Streptococcus pyogenes strain D641]
MPDHLALRMRPKTISEVIGQKHLVGEGKIIRRMVEANRLSSMILYGPPGIGKTSIASAIAGTTRYAFRTFNATIDSKKRL
QEIAEEAKFSGGLVLLLDEIHRLDKTKQDFLLPLLENGTIIMIGATTENPFFSVTPAIRSRVQIFELEPLSNEDIKTAIQ
LAISDKERGFPFLVTIDDEALDFIVTATNGDLRSAYNSLDLAVMSTSPNEDGSRHISLETMENSLQRSYITMDKNGDGHY
DVLSALQKSIRGSDVNASLHYAARLVEAGDLPSLARRLTIIAYEDIGLANPDAQVHTVTALDAAQRIGFPEARILIANVV
IDLALSPKSNSAYLAMDAALADLRTSGNLPIPRHLRDGHYAGSKDLGNAKDYLYPHAYPEKWVKQQYLPDKLVGHHYFEA
NETGKYERALGSNKERIDKLLD

Nucleotide

• Length: 1269 bp

>NTDB_id=840449 VKP39_RS07745 WP_109828860.1 1561130..1562398(+) (rarA) [Streptococcus pyogenes strain D641]
ATGCCCGATCATTTAGCGCTCAGAATGCGCCCCAAAACCATTTCAGAGGTCATCGGACAAAAACACCTTGTTGGCGAAGG
CAAAATCATCCGTCGCATGGTGGAAGCAAATAGACTATCGTCCATGATCCTCTATGGACCACCAGGAATCGGTAAAACTT
CCATTGCTTCTGCTATTGCTGGTACTACTAGATATGCCTTTCGGACCTTTAATGCCACCATTGACAGCAAAAAACGTCTC
CAAGAAATTGCGGAAGAAGCTAAATTTTCTGGTGGCTTGGTATTATTACTAGACGAGATTCATCGCCTTGACAAGACAAA
ACAAGATTTTCTTTTACCTTTACTTGAGAACGGCACCATTATCATGATTGGCGCAACCACTGAGAATCCCTTCTTTTCAG
TGACACCCGCTATCAGAAGCAGGGTCCAGATTTTTGAATTGGAACCACTTTCTAACGAGGATATTAAAACAGCCATTCAG
CTAGCAATTTCCGACAAAGAACGGGGATTTCCTTTTTTAGTGACAATTGATGATGAGGCGCTAGATTTCATTGTTACCGC
CACAAATGGAGACCTACGATCTGCTTATAATTCCTTGGATCTAGCAGTCATGTCTACTTCTCCTAATGAAGATGGTAGCC
GTCATATTAGTCTAGAGACAATGGAAAATAGTCTGCAGCGTAGTTATATTACCATGGATAAAAACGGGGACGGGCATTAT
GATGTTTTATCTGCCTTACAAAAATCCATTAGAGGTTCTGATGTCAATGCTAGCCTGCACTACGCCGCTCGTTTAGTAGA
AGCTGGAGACTTGCCTAGTTTAGCAAGACGATTGACCATTATTGCTTACGAAGATATTGGCTTAGCCAACCCTGACGCCC
AAGTTCATACCGTCACCGCACTAGATGCCGCTCAACGCATTGGTTTTCCAGAAGCTCGTATTCTTATCGCTAACGTGGTC
ATTGATTTGGCTCTATCACCTAAATCCAATTCAGCTTATTTAGCTATGGATGCAGCTTTAGCTGATTTGAGAACATCAGG
TAACCTCCCCATTCCAAGGCATCTTAGAGACGGGCATTACGCTGGCAGCAAGGACCTAGGCAATGCCAAAGATTACCTCT
ACCCACACGCCTACCCTGAAAAATGGGTCAAACAACAATACCTACCAGATAAATTAGTAGGACATCATTATTTTGAAGCC
AATGAAACCGGTAAATACGAACGCGCACTTGGTTCAAATAAAGAGCGTATTGATAAGCTCTTAGACTGA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (174-251)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-415)

• ATPase family associated with various cellular activities (AAA) (AAA) (42-144)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	59.809	99.052	0.592