Detailed information NTG0840352

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: VKP38_RS08190
• Genome accession: NZ_CP142352
• Coordinates: 1640723..1641991 (+)
• Length: 422 a.a.
• NCBI ID: WP_011285735.1
• Uniprot ID: -
• Organism: Streptococcus pyogenes strain 2907-97
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1635723..1646991

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VKP38_RS08175 (VKP38_08175)	-	1636176..1638149 (+)	1974	WP_326608815.1	amidase family protein	-
VKP38_RS08180 (VKP38_08180)	pabB	1638334..1640091 (+)	1758	WP_326608816.1	aminodeoxychorismate synthase component I	-
VKP38_RS08185 (VKP38_08185)	-	1640124..1640690 (+)	567	WP_021733904.1	aminodeoxychorismate/anthranilate synthase component II	-
VKP38_RS08190 (VKP38_08190)	rarA	1640723..1641991 (+)	1269	WP_011285735.1	replication-associated recombination protein A	Machinery gene
VKP38_RS08205 (VKP38_08205)	smeZ	1642564..1643265 (+)	702	WP_136294521.1	streptococcal mitogenic exotoxin SmeZ	-
VKP38_RS08210 (VKP38_08210)	-	1644142..1644456 (+)	315	WP_000420682.1	YdcP family protein	-
VKP38_RS08215 (VKP38_08215)	-	1644472..1644858 (+)	387	WP_000985015.1	YdcP family protein	-
VKP38_RS08220 (VKP38_08220)	-	1644887..1646272 (+)	1386	WP_000813488.1	FtsK/SpoIIIE domain-containing protein	-
VKP38_RS08225 (VKP38_08225)	-	1646275..1646427 (+)	153	WP_000879507.1	hypothetical protein	-

Sequence

Protein

• Length: 422 a.a.
• Molecular weight: 46615.04 Da
• Isoelectric Point: 6.3774

>NTDB_id=840352 VKP38_RS08190 WP_011285735.1 1640723..1641991(+) (rarA) [Streptococcus pyogenes strain 2907-97]
MPDHLALRMRPKTISEVIGQKHLVGEGKIIRRMVEANRLSSMILYGPPGIGKTSIASAIAGTTRYAFRTFNATIDSKKRL
QEIAEEAKFSGGLVLLLDEIHRLDKTKQDFLLPLLENGTIIMIGATTENPFFSVTPAIRSRVQIFELEPLSNEDIKTAIQ
LAISDKERGFPFLVTIDDEALDFIVTATNGDLRSAYNSLDLAVMSTSPNEDGSRHISLETMENSLQRSYITMDKNGDGHY
DVLSALQKSIRGSDVNASLHYAARLVEAGDLPSLARRLTIIAYEDIGLANPDAQVHTVTALDAAQRIGFPEARILIANVV
IDLALSPKSNSAYLAMDAALADLRTSGNLPIPRHLRDGHYAGSKDLGNAKDYLYPHAYPEKWVKQQYLPDKLVGHHYFEA
NETGKYERALGSNKERIDKLSD

Nucleotide

• Length: 1269 bp

>NTDB_id=840352 VKP38_RS08190 WP_011285735.1 1640723..1641991(+) (rarA) [Streptococcus pyogenes strain 2907-97]
ATGCCCGATCATTTAGCGCTCAGAATGCGCCCCAAAACCATTTCAGAGGTCATCGGACAAAAACACCTTGTTGGCGAAGG
CAAAATCATCCGTCGCATGGTGGAAGCAAATAGACTATCGTCCATGATCCTCTATGGACCACCAGGAATCGGTAAAACTT
CCATTGCTTCTGCTATTGCTGGTACTACTAGATATGCCTTTCGGACCTTTAATGCCACCATTGACAGCAAAAAACGTCTC
CAAGAAATTGCGGAAGAAGCTAAATTTTCTGGTGGCTTGGTATTATTACTAGACGAGATTCATCGCCTTGACAAGACAAA
ACAAGATTTTCTTTTACCTTTACTTGAGAACGGCACCATTATCATGATTGGCGCAACCACTGAGAATCCCTTCTTTTCAG
TGACACCCGCTATCAGAAGCAGGGTCCAGATTTTTGAATTGGAACCACTTTCTAACGAGGATATTAAAACAGCCATTCAG
CTAGCAATTTCCGACAAAGAACGGGGATTTCCTTTTTTAGTGACAATTGATGATGAGGCGCTAGATTTCATTGTTACCGC
CACAAATGGAGACCTACGATCTGCTTATAATTCCTTGGATCTAGCAGTCATGTCTACTTCTCCTAATGAAGATGGTAGCC
GTCATATTAGTCTAGAGACAATGGAAAATAGTCTGCAGCGTAGTTATATTACCATGGATAAAAACGGGGACGGGCATTAT
GATGTTTTATCTGCCTTACAAAAATCCATTAGAGGTTCTGATGTCAATGCTAGCCTGCACTACGCCGCTCGTTTAGTAGA
AGCTGGAGACTTGCCTAGTTTAGCAAGACGATTGACCATTATTGCTTACGAAGATATTGGCTTAGCCAACCCTGACGCCC
AAGTTCATACCGTCACCGCACTAGATGCCGCTCAACGCATTGGTTTTCCAGAAGCTCGTATTCTTATCGCTAACGTGGTC
ATTGATTTGGCTCTATCTCCTAAATCCAATTCAGCTTATTTAGCTATGGATGCAGCTTTAGCTGATTTGAGAACATCAGG
TAACCTCCCCATTCCAAGGCATCTTAGAGACGGGCATTATGCTGGCAGCAAGGACCTAGGCAATGCCAAAGATTACCTCT
ACCCTCACGCCTATCCTGAAAAATGGGTCAAACAACAATACCTACCAGATAAATTAGTAGGACATCATTATTTTGAAGCC
AATGAAACCGGTAAATACGAACGCGCACTTGGTTCAAATAAAGAGCGTATTGATAAGCTCTCAGACTGA

Domains

Predicted by InterProScan.

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-415)

• ATPase family associated with various cellular activities (AAA) (AAA) (42-144)

• AAA C-terminal domain (AAA_assoc_2) (174-251)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	59.952	98.815	0.592