Detailed information NTG0840160

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: VKP56_RS08090
• Genome accession: NZ_CP142350
• Coordinates: 1613499..1614767 (+)
• Length: 422 a.a.
• NCBI ID: WP_326656955.1
• Uniprot ID: -
• Organism: Streptococcus pyogenes strain SS1445
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1608499..1619767

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VKP56_RS08065 (VKP56_08065)	-	1609639..1610079 (-)	441	WP_043885017.1	NUDIX hydrolase	-
VKP56_RS08070 (VKP56_08070)	-	1610091..1610436 (-)	346	Protein_1535	ASCH domain-containing protein	-
VKP56_RS08075 (VKP56_08075)	-	1610438..1610908 (-)	471	WP_002987990.1	DUF3013 family protein	-
VKP56_RS08080 (VKP56_08080)	pabB	1611110..1612867 (+)	1758	WP_326656951.1	aminodeoxychorismate synthase component I	-
VKP56_RS08085 (VKP56_08085)	-	1612900..1613466 (+)	567	WP_136107845.1	aminodeoxychorismate/anthranilate synthase component II	-
VKP56_RS08090 (VKP56_08090)	rarA	1613499..1614767 (+)	1269	WP_326656955.1	replication-associated recombination protein A	Machinery gene
VKP56_RS08105 (VKP56_08105)	smeZ	1615340..1616041 (+)	702	WP_136272060.1	streptococcal mitogenic exotoxin SmeZ	-
VKP56_RS08110 (VKP56_08110)	-	1616400..1616591 (-)	192	WP_134984728.1	hypothetical protein	-
VKP56_RS08115 (VKP56_08115)	-	1616770..1618398 (+)	1629	WP_010922707.1	ABC transporter substrate-binding protein	-
VKP56_RS08120 (VKP56_08120)	-	1618511..1619488 (+)	978	WP_326656961.1	ABC transporter permease	-

Sequence

Protein

• Length: 422 a.a.
• Molecular weight: 46578.03 Da
• Isoelectric Point: 6.2411

>NTDB_id=840160 VKP56_RS08090 WP_326656955.1 1613499..1614767(+) (rarA) [Streptococcus pyogenes strain SS1445]
MPDHLALRMRPKTISEVIGQKHLVGEGKIIRRMVEANMLSSMILYGPPGIGKTSIASAIAGTTKYAFRTFNATVDSKKRL
QEIAEEAKFSGGLVLLLDEIHRLDKTKQDFLLPLLENGTIIMIGATTENPFFSVTPAIRSRVQIFELEPLSNEDIKTAIQ
LAISDKERGFPFLVTIDDEALDFIVTATNGDLRSAYNSLDLAVMSTSPNEDSSRHISLETMENSLQRSYITMDKNGDGHY
DVLSALQKSIRGSDVNASLHYAARLVEAGDLPSLARRLTIIAYEDIGLANPDAQVHTVTALDAAQRIGFPEARILIANVV
IDLALSPKSNSAYLAMDAALADLRTSGNLPIPRHLRDGHYAGSKDLGNAKDYLYPHAYPEKWVKQQYLPDKLVGHHYFEA
NETGKYERALGSNKERIDKLSD

Nucleotide

• Length: 1269 bp

>NTDB_id=840160 VKP56_RS08090 WP_326656955.1 1613499..1614767(+) (rarA) [Streptococcus pyogenes strain SS1445]
ATGCCCGATCATTTAGCGCTCAGAATGCGCCCCAAAACCATTTCAGAGGTCATCGGACAAAAACACCTTGTTGGCGAAGG
CAAAATCATTCGTCGCATGGTGGAAGCCAATATGCTATCGTCCATGATTCTCTATGGTCCTCCAGGAATCGGTAAAACTT
CCATTGCTAGCGCTATTGCAGGTACCACCAAGTATGCCTTTCGGACCTTTAATGCCACCGTTGATAGCAAAAAACGTCTC
CAAGAAATTGCTGAGGAGGCCAAATTTTCAGGAGGATTGGTATTGCTACTAGACGAGATTCATCGGCTAGACAAAACCAA
ACAAGACTTCCTGCTCCCCTTACTGGAAAATGGTACCATTATCATGATTGGCGCAACCACTGAGAATCCCTTCTTTTCAG
TGACACCAGCTATCAGAAGCAGGGTCCAGATTTTTGAATTGGAACCACTTTCTAACGAGGATATTAAAACAGCCATTCAG
CTAGCAATTTCCGACAAAGAACGGGGATTTCCTTTTTTAGTGACAATTGATGATGAGGCGCTAGATTTCATTGTTACCGC
CACAAATGGAGACCTACGATCTGCTTATAATTCCTTGGATCTAGCAGTCATGTCTACTTCTCCTAATGAAGATAGTAGCC
GTCATATTAGTCTAGAGACAATGGAAAATAGTCTGCAGCGTAGTTATATTACCATGGATAAAAACGGGGACGGGCATTAT
GATGTTTTATCTGCCTTACAAAAATCCATTAGAGGTTCTGATGTCAATGCTAGCCTGCACTACGCCGCTCGTTTAGTAGA
AGCTGGAGACTTGCCTAGTTTAGCAAGACGATTGACCATTATTGCTTACGAAGATATTGGCTTAGCCAACCCTGACGCCC
AAGTTCATACCGTCACCGCACTAGATGCCGCCCAACGCATTGGTTTTCCAGAAGCTCGTATTCTTATCGCTAACGTGGTC
ATTGATTTGGCCCTATCACCTAAATCCAATTCAGCTTATTTAGCTATGGATGCAGCTTTAGCTGATTTGAGAACATCAGG
TAACCTCCCCATTCCAAGGCATCTTAGAGACGGGCATTATGCTGGCAGTAAGGACCTAGGCAATGCCAAAGATTACCTCT
ACCCACACGCCTACCCTGAAAAATGGGTCAAACAACAATACCTACCAGATAAATTAGTAGGACATCATTATTTTGAAGCC
AATGAAACCGGTAAATACGAACGCGCACTTGGTTCAAATAAAGAGCGTATTGATAAGCTCTCAGACTGA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (174-251)

• ATPase family associated with various cellular activities (AAA) (AAA) (42-144)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-415)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	59.472	98.815	0.588