Detailed information NTG0840067

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: VKP35_RS08510
• Genome accession: NZ_CP142349
• Coordinates: 1654028..1655296 (+)
• Length: 422 a.a.
• NCBI ID: WP_002982538.1
• Uniprot ID: -
• Organism: Streptococcus pyogenes strain 11RS100
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1649028..1660296

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VKP35_RS08495 (VKP35_08495)	-	1649481..1651454 (+)	1974	WP_111713397.1	amidase family protein	-
VKP35_RS08500 (VKP35_08500)	pabB	1651639..1653396 (+)	1758	WP_326622757.1	aminodeoxychorismate synthase component I	-
VKP35_RS08505 (VKP35_08505)	-	1653429..1653995 (+)	567	WP_326622759.1	aminodeoxychorismate/anthranilate synthase component II	-
VKP35_RS08510 (VKP35_08510)	rarA	1654028..1655296 (+)	1269	WP_002982538.1	replication-associated recombination protein A	Machinery gene
VKP35_RS08525 (VKP35_08525)	smeZ	1655869..1656570 (+)	702	WP_032467239.1	streptococcal mitogenic exotoxin SmeZ	-
VKP35_RS08530 (VKP35_08530)	-	1656896..1657120 (-)	225	WP_111713399.1	hypothetical protein	-
VKP35_RS08535 (VKP35_08535)	-	1657299..1658927 (+)	1629	WP_046177483.1	ABC transporter substrate-binding protein	-
VKP35_RS08540 (VKP35_08540)	-	1659040..1660017 (+)	978	WP_002982524.1	ABC transporter permease	-

Sequence

Protein

• Length: 422 a.a.
• Molecular weight: 46645.07 Da
• Isoelectric Point: 6.3774

>NTDB_id=840067 VKP35_RS08510 WP_002982538.1 1654028..1655296(+) (rarA) [Streptococcus pyogenes strain 11RS100]
MPDHLALRMRPKTISEVIGQKHLVGEGKIIRRMVEANRLSSMILYGPPGIGKTSIASAIAGTTRYAFRTFNATIDSKKRL
QEIAEEAKFSGGLVLLLDEIHRLDKTKQDFLLPLLENGTIIMIGATTENPFFSVTPAIRSRVQIFELEPLSNEDIKTAIQ
LAISDKERGFPFLVTIDDEALDFIVTATNGDLRSAYNSLDLAVMSTSPNEDSSRHISLETMENSLQRSYITMDKNGDGHY
DVLSALQKSIRGSDVNASLHYAARLVEAGDLPSLARRLTIIAYEDIGLANPDAQVHTVTALDAAQRIGFPEARILIANVV
IDLALSPKSNSAYLAMDAALADLRTSGNLPIPRHLRDGHYAGSKDLGNAKDYLYPHAYPEKWVKQQYLPDKLVGHHYFEA
NETGKYERALGSNKERIDKLSD

Nucleotide

• Length: 1269 bp

>NTDB_id=840067 VKP35_RS08510 WP_002982538.1 1654028..1655296(+) (rarA) [Streptococcus pyogenes strain 11RS100]
ATGCCTGATCATTTAGCGCTCAGAATGCGTCCCAAAACCATTTCAGAGGTCATCGGACAAAAACACCTTGTTGGCGAAGG
CAAAATCATCCGTCGCATGGTGGAAGCAAATAGACTATCGTCCATGATCCTCTATGGCCCTCCAGGAATCGGTAAAACTT
CCATTGCTTCTGCTATTGCTGGTACTACTAGATATGCCTTTCGGACCTTTAATGCCACCATTGACAGCAAAAAACGTCTC
CAAGAAATTGCGGAAGAAGCTAAATTTTCTGGTGGCTTGGTATTATTACTAGACGAGATTCATCGCCTTGACAAGACAAA
ACAAGATTTTCTTTTACCTTTACTTGAGAATGGCACCATTATCATGATTGGCGCAACCACTGAGAACCCCTTCTTTTCAG
TGACACCCGCTATCAGAAGCAGGGTCCAGATTTTTGAATTGGAACCACTTTCTAACGAGGATATTAAAACAGCCATTCAG
CTAGCAATTTCCGACAAAGAACGGGGATTTCCTTTTTTAGTGACAATTGATGATGAGGCGCTAGATTTCATTGTTACCGC
CACAAATGGAGACCTACGATCTGCTTATAATTCCTTGGATCTAGCAGTCATGTCTACTTCTCCTAATGAAGATAGTAGCC
GTCATATTAGTCTAGAGACAATGGAAAATAGTCTGCAGCGTAGTTATATTACCATGGATAAAAACGGGGATGGGCATTAT
GATGTTTTATCTGCCTTACAAAAATCCATTAGAGGTTCTGATGTCAATGCTAGCCTGCACTACGCCGCTCGTTTAGTAGA
AGCTGGAGACTTGCCTAGTTTAGCAAGACGATTGACCATTATTGCTTACGAAGATATTGGCTTAGCCAACCCTGACGCCC
AAGTTCATACCGTCACCGCACTAGATGCCGCTCAACGCATTGGTTTTCCAGAAGCTCGTATTCTTATCGCTAACGTGGTC
ATTGATTTGGCTCTATCACCTAAATCCAATTCAGCTTATTTAGCTATGGATGCAGCTTTAGCTGATTTGAGAACATCAGG
TAACCTCCCCATTCCAAGGCATCTTAGAGACGGGCATTATGCTGGCAGCAAGGACCTAGGCAATGCCAAAGATTACCTCT
ACCCACACGCCTACCCTGAAAAATGGGTCAAACAACAATACCTACCAGATAAATTAGTAGGACATCATTATTTTGAAGCC
AATGAAACAGGTAAATACGAACGCGCACTTGGTTCAAATAAAGAGCGTATTGATAAGCTCTCAGACTGA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (174-251)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-415)

• ATPase family associated with various cellular activities (AAA) (AAA) (42-144)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	59.712	98.815	0.59