Detailed information NTG0838541

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: QN218_RS04975
• Genome accession: NZ_CP126534
• Coordinates: 970894..973290 (+)
• Length: 798 a.a.
• NCBI ID: WP_003237483.1
• Uniprot ID: -
• Organism: Bacillus inaquosorum strain BSY82
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 965894..978290

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QN218_RS04950	-	965976..967241 (-)	1266	WP_060399135.1	replication-associated recombination protein A	-
QN218_RS04955	cymR	967443..967859 (+)	417	WP_003225879.1	cysteine metabolism transcriptional regulator CymR	-
QN218_RS04960	-	967878..969020 (+)	1143	WP_003237487.1	cysteine desulfurase family protein	-
QN218_RS04965	mnmA	969048..970163 (+)	1116	WP_060399134.1	tRNA 2-thiouridine(34) synthase MnmA	-
QN218_RS04970	-	970249..970869 (+)	621	WP_232919234.1	tetratricopeptide repeat protein	-
QN218_RS04975	recD2	970894..973290 (+)	2397	WP_003237483.1	ATP-dependent RecD-like DNA helicase	Machinery gene
QN218_RS04980	-	973347..973871 (+)	525	WP_080429038.1	PRC-barrel domain-containing protein	-
QN218_RS04985	-	973883..974074 (+)	192	WP_003225893.1	hypothetical protein	-
QN218_RS04990	-	974096..974227 (+)	132	WP_003225895.1	YrzQ family protein	-
QN218_RS04995	-	974263..974919 (-)	657	WP_003237481.1	amino acid ABC transporter permease	-
QN218_RS05000	-	974936..975586 (-)	651	WP_003237480.1	amino acid ABC transporter permease	-
QN218_RS05005	glnH	975647..976468 (-)	822	WP_003237479.1	glutamine ABC transporter substrate-binding protein GlnH	-
QN218_RS05010	-	976490..977218 (-)	729	WP_060399132.1	amino acid ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 798 a.a.
• Molecular weight: 89155.77 Da
• Isoelectric Point: 5.0321

>NTDB_id=838541 QN218_RS04975 WP_003237483.1 970894..973290(+) (recD2) [Bacillus inaquosorum strain BSY82]
MQQHPDQLKLEEEPYLKGTVNTVIYHNDTNLYTVLKVKVTETSEAIEDKAVSVTGYFPALQEEETYTFYGKIVTHPKFGL
QFQAEHFKKEIPTTKEGIIQYLSSDLFEGIGKKTAEEIVKKLGDSAINKILADASVLYDVPKLSKKKADTLAGALQRHQG
LEQIMISLNQFGFGPQLSMKIYQAYESETLEKIQENPYQLVKDVEGIGFGKADELGSRMGLSGNHPERVKAAILYTLETT
CLSEGHTYIETEKLIIDTQSLLNQSAREGQRITEMDAANAIIALGENKDIVIEDGRCYFPSLFYAEQNVAKRVKHIASQT
EYDDQFPESEFLLALGELEERMNVQYAPSQKEAIQKALSSPMLLLTGGPGTGKTTVIRGIVELYGELHGVSLDPSAYKKD
EAFPVVLAAPTGRAAKRMSESTGLPAVTIHRLLGWNGAEGFTHTEDEPIEGKLLIIDEASMLDIWLANHLFKAIPDHIQI
IIVGDEDQLPSVGPGQVLRDLLASQVIPTVRLTDIYRQAEGSSIVELAHQMKNGLLPNNLTAPTKDRSFIRCGGSQIKEV
VEKVVANALKKGYTAKDIQVLAPMYRGKAGINELNVMLQDILNPPREKRREIKFGDVVYRTGDKILQLVNQPENNVFNGD
IGEITSIFYAKENTEKEDMAVVSFDGNEMTFTKKDFNQFTHAYCCSIHKSQGSEFPIVVLPVVKGYYRMLRRNLLYTAIT
RAKKFLILCGEEEALEWGVKNNDATVRQTSLKNRLSLQVEEMDAELEALQKELPFSVHDANIGMEGITPFDFMKEEQL

Nucleotide

• Length: 2397 bp

>NTDB_id=838541 QN218_RS04975 WP_003237483.1 970894..973290(+) (recD2) [Bacillus inaquosorum strain BSY82]
GTGCAGCAGCATCCGGATCAGCTTAAACTGGAGGAAGAGCCCTATTTAAAAGGGACAGTCAACACAGTCATCTATCATAA
TGACACCAATTTATATACGGTTCTGAAAGTGAAAGTCACAGAGACCTCCGAAGCTATTGAAGATAAAGCCGTATCCGTGA
CGGGCTACTTCCCTGCGCTTCAAGAAGAAGAGACCTACACGTTTTACGGAAAGATCGTAACCCATCCAAAATTCGGGCTC
CAATTTCAGGCGGAGCATTTCAAAAAGGAGATTCCGACGACTAAGGAAGGCATCATTCAATATTTATCGAGTGATTTGTT
CGAGGGAATCGGCAAAAAAACAGCCGAGGAAATTGTGAAAAAGCTGGGCGACAGCGCTATTAATAAAATATTGGCTGACG
CTTCAGTGCTTTATGACGTTCCGAAGCTGTCAAAAAAGAAAGCTGATACGCTGGCCGGCGCCTTGCAGCGTCATCAGGGA
CTGGAGCAAATCATGATTTCCCTGAATCAGTTTGGCTTCGGCCCGCAGCTGTCTATGAAAATCTACCAAGCCTATGAATC
CGAGACGCTTGAAAAGATTCAGGAAAACCCTTATCAGCTTGTGAAAGATGTAGAAGGCATCGGATTTGGGAAAGCGGATG
AGCTGGGCAGCAGAATGGGCCTTTCGGGTAATCACCCTGAGCGGGTAAAAGCCGCCATATTGTACACGCTTGAAACGACT
TGTCTGTCAGAAGGGCATACGTACATAGAAACGGAGAAGCTGATTATTGACACCCAATCTCTGTTAAATCAATCAGCTCG
GGAGGGACAGCGCATCACTGAAATGGATGCCGCTAACGCGATTATTGCCCTTGGAGAAAATAAAGACATTGTCATAGAAG
ATGGCCGCTGTTATTTTCCATCGCTGTTTTACGCTGAACAAAATGTTGCTAAGCGAGTGAAACATATCGCAAGCCAAACT
GAATATGATGACCAGTTTCCCGAATCAGAATTTCTGCTCGCTTTAGGAGAACTGGAAGAACGGATGAACGTTCAGTATGC
CCCTAGCCAGAAGGAAGCGATTCAAAAAGCCCTTTCCTCACCGATGCTTCTTTTAACGGGGGGACCGGGAACAGGGAAAA
CGACGGTAATCAGAGGGATTGTCGAACTGTACGGAGAGCTTCACGGTGTGTCACTCGACCCGTCAGCGTATAAAAAGGAT
GAAGCTTTTCCGGTTGTATTGGCCGCACCGACAGGAAGAGCGGCGAAACGGATGAGTGAATCAACGGGGCTTCCGGCAGT
GACGATTCACAGGCTGCTTGGCTGGAACGGCGCTGAAGGATTTACCCATACAGAGGATGAGCCGATTGAAGGGAAGCTGT
TAATAATCGATGAAGCCAGCATGCTTGATATATGGCTGGCGAACCATTTGTTCAAGGCGATCCCTGATCATATTCAAATC
ATCATTGTCGGTGACGAAGATCAGCTGCCTTCTGTCGGTCCGGGCCAAGTGCTGAGAGACCTTTTGGCATCCCAGGTGAT
ACCGACTGTGAGACTGACAGACATCTACCGCCAGGCGGAGGGTTCATCGATTGTCGAGCTTGCCCACCAAATGAAAAATG
GGTTGCTGCCAAACAATTTGACTGCCCCGACGAAGGACCGTTCCTTTATTCGCTGCGGAGGCTCGCAAATTAAAGAGGTA
GTTGAGAAGGTTGTCGCCAATGCATTGAAAAAAGGCTATACGGCAAAGGACATTCAGGTTCTCGCCCCGATGTACAGAGG
AAAAGCCGGGATCAATGAACTGAATGTGATGCTACAGGATATTTTGAATCCTCCTAGAGAAAAACGGAGGGAAATAAAGT
TCGGGGATGTTGTCTACAGAACCGGGGATAAAATTTTGCAGCTCGTCAATCAGCCGGAAAACAATGTGTTCAACGGAGAC
ATTGGCGAAATTACATCGATATTTTATGCGAAGGAAAATACAGAAAAAGAAGATATGGCCGTCGTTTCTTTTGACGGCAA
TGAAATGACGTTTACGAAAAAAGATTTTAACCAGTTTACCCATGCGTATTGCTGCTCTATTCATAAATCGCAGGGAAGTG
AATTTCCGATTGTGGTTTTGCCTGTTGTGAAAGGCTATTATAGAATGCTCAGAAGAAACCTTCTTTATACCGCTATTACA
AGAGCAAAGAAATTTCTCATTTTATGCGGAGAAGAGGAAGCGCTGGAGTGGGGCGTGAAAAATAACGACGCAACTGTCAG
ACAGACTTCTTTGAAAAACAGGCTGTCATTACAGGTTGAGGAAATGGATGCTGAGCTTGAAGCTTTGCAAAAGGAGCTCC
CATTCAGCGTACACGATGCCAATATTGGCATGGAAGGCATTACACCATTCGATTTTATGAAAGAAGAACAGCTGTAA

Domains

Predicted by InterproScan.

• Helix-hairpin-helix containing domain (HHH_RecD2) (158-248)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (594-662)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (681-729)

• AAA domain (AAA_30) (346-553)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	98.745	99.875	0.986