Detailed information NTG0838325

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: QPL77_RS12215
• Genome accession: NZ_CP126521
• Coordinates: 2416643..2419027 (-)
• Length: 794 a.a.
• NCBI ID: WP_211062957.1
• Uniprot ID: -
• Organism: Bacillus pumilus strain Monterrey_S2
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2411643..2424027

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QPL77_RS12180 (QPL77_12180)	-	2412512..2413240 (+)	729	WP_211062961.1	amino acid ABC transporter ATP-binding protein	-
QPL77_RS12185 (QPL77_12185)	-	2413254..2414063 (+)	810	WP_211062960.1	transporter substrate-binding domain-containing protein	-
QPL77_RS12190 (QPL77_12190)	-	2414140..2414793 (+)	654	WP_119125178.1	amino acid ABC transporter permease	-
QPL77_RS12195 (QPL77_12195)	-	2414809..2415459 (+)	651	WP_211062959.1	amino acid ABC transporter permease	-
QPL77_RS12200 (QPL77_12200)	-	2415693..2415824 (-)	132	WP_003216198.1	YrzQ family protein	-
QPL77_RS12205 (QPL77_12205)	-	2415845..2416036 (-)	192	WP_211062958.1	hypothetical protein	-
QPL77_RS12210 (QPL77_12210)	-	2416050..2416508 (-)	459	WP_249407355.1	prc-barrel domain-containing protein	-
QPL77_RS12215 (QPL77_12215)	recD2	2416643..2419027 (-)	2385	WP_211062957.1	ATP-dependent RecD-like DNA helicase	Machinery gene
QPL77_RS12220 (QPL77_12220)	-	2419047..2419700 (-)	654	WP_211062956.1	tetratricopeptide repeat protein	-
QPL77_RS12225 (QPL77_12225)	mnmA	2419761..2420879 (-)	1119	WP_003216305.1	tRNA 2-thiouridine(34) synthase MnmA	-
QPL77_RS12230 (QPL77_12230)	-	2420975..2422117 (-)	1143	WP_211062955.1	cysteine desulfurase family protein	-
QPL77_RS12235 (QPL77_12235)	-	2422136..2422555 (-)	420	WP_012010726.1	Rrf2 family transcriptional regulator	-

Sequence

Protein

• Length: 794 a.a.
• Molecular weight: 88979.48 Da
• Isoelectric Point: 5.2109

>NTDB_id=838325 QPL77_RS12215 WP_211062957.1 2416643..2419027(-) (recD2) [Bacillus pumilus strain Monterrey_S2]
MQEHPDQMKLEDEPFLKGTVQAVIFHNESNLYSVLKVKVIETSENLEEKTASVTGYFPALHEEETYTFYGKVTSHPKFGE
QFQATHFQKEVPTTKQGIIHYLSSDLFEGIGKKTAEEIVGKLGSETLHKIMRDPAVLYDVPRLSKKKADKLAAALQEHQG
LEQIMISLNQYGFGPQLSMKIYQVYESETLQKIEENPYQLVKDVEGIGFIKADELGARTGISGSDPERIRAALLYTVETA
SLQDGHTYIQTKDLIVETRKLLNQTGNEYKVTEMDVANQIIALGEGKDMIIEDERCYHPSLFYAEQSVAKRIQKIVSQTE
YADQFPESEFLLALGELEERLGVQYAPTQKEAIQKALMSPMLLLTGGPGTGKTTVIKGIVELYSDLHGVSLDPSDYKKDE
SFPFVLAAPTGRAAKRMTESTGLPAVTIHRLLGWNGSEGFSHDDEQPIEGKLVIIDESSMLDIWLANHLFKAIPDHIQVI
MVGDEHQLPSVGPGQVLRDLLASQAVPAVTLTDIYRQADGSSIVELAHDMKNGVLPKDITARSKDRSFIKCSADQMKEVI
EKVVSNAAQKGYSAKDIQVLAPMYKGKAGINELNKMLQHILNPKKPKGREIPFGDVVYRTGDKVLQLVNQPENNIFNGDI
GEIVSIFYAKENTEKEDMAVISFDGNEITFTKKDFHQFTHAYCCSIHKSQGSEFPIVVLPVVRSYYRMLRRNLLYTAITR
SKKFLILCGEESALEWGVKNNEDSLRQTSLTMRLVQTEEIMDAELAALQRELPFSVHDANIGMEGITPFDFMHE

Nucleotide

• Length: 2385 bp

>NTDB_id=838325 QPL77_RS12215 WP_211062957.1 2416643..2419027(-) (recD2) [Bacillus pumilus strain Monterrey_S2]
GTGCAGGAACATCCAGATCAAATGAAGCTTGAGGACGAACCGTTTTTAAAGGGGACAGTTCAAGCCGTTATTTTCCATAA
TGAAAGTAATTTATACTCGGTGTTAAAGGTGAAAGTCATTGAAACATCGGAAAACTTAGAGGAAAAAACAGCATCTGTCA
CAGGCTACTTCCCAGCACTTCATGAGGAAGAAACTTACACCTTCTATGGCAAAGTCACAAGCCATCCGAAGTTTGGTGAA
CAGTTTCAGGCGACTCATTTTCAAAAGGAAGTACCAACAACAAAGCAAGGAATAATCCATTATCTTTCAAGTGATTTATT
TGAGGGGATAGGCAAAAAGACAGCGGAAGAAATTGTAGGAAAGCTTGGCAGTGAGACGCTTCATAAAATTATGCGTGACC
CAGCGGTTTTGTATGACGTTCCGCGCTTATCAAAAAAGAAGGCAGATAAGCTGGCTGCAGCGCTCCAGGAGCATCAAGGA
TTGGAACAAATCATGATTAGCCTGAATCAATACGGCTTTGGTCCGCAGCTCAGTATGAAGATTTATCAAGTGTACGAGAG
TGAGACGCTACAGAAGATTGAAGAAAACCCGTATCAACTCGTCAAGGATGTTGAAGGGATCGGATTTATTAAGGCGGATG
AACTTGGCGCTAGAACCGGCATCTCAGGAAGTGACCCAGAGCGAATCCGTGCAGCCTTGCTTTATACAGTGGAGACAGCC
AGTCTTCAGGACGGTCATACGTACATACAAACAAAGGATTTGATCGTTGAAACCCGAAAACTACTCAATCAGACAGGAAA
TGAGTACAAAGTGACGGAAATGGACGTCGCCAATCAGATCATTGCACTTGGCGAAGGGAAAGACATGATCATTGAAGATG
AGCGCTGCTATCATCCGTCCTTATTTTATGCCGAGCAAAGTGTCGCGAAACGTATACAAAAAATCGTCTCCCAAACGGAA
TATGCAGATCAATTTCCTGAATCAGAATTCCTTCTAGCCCTTGGTGAACTAGAGGAACGGCTAGGCGTCCAATATGCGCC
GACACAAAAAGAAGCGATTCAAAAGGCACTCATGTCCCCAATGCTGCTTTTAACAGGCGGACCTGGGACTGGGAAGACAA
CAGTCATTAAAGGGATTGTTGAGCTTTACAGCGATCTTCATGGTGTATCACTTGACCCAAGTGATTATAAAAAGGATGAA
TCCTTCCCATTTGTGCTTGCGGCACCAACTGGACGAGCAGCTAAACGGATGACAGAATCAACAGGGCTTCCAGCTGTGAC
GATTCATCGGCTGCTTGGTTGGAACGGATCAGAGGGATTTTCTCATGATGATGAACAGCCGATTGAAGGAAAGCTTGTCA
TCATTGATGAATCAAGTATGCTAGATATTTGGCTTGCGAATCACTTGTTTAAAGCCATTCCTGACCATATACAAGTGATC
ATGGTGGGGGATGAACATCAGCTTCCGTCTGTCGGACCAGGCCAGGTGTTAAGAGACTTGCTTGCATCACAAGCCGTGCC
AGCTGTTACCCTAACAGATATTTACCGGCAGGCAGACGGCTCCAGCATTGTTGAACTTGCACATGATATGAAAAATGGTG
TCCTACCAAAGGATATTACCGCACGTTCAAAGGATCGATCTTTCATCAAATGCTCAGCTGATCAAATGAAAGAAGTGATT
GAGAAAGTCGTCAGCAATGCTGCTCAAAAAGGCTATTCAGCTAAAGACATTCAAGTGCTTGCGCCCATGTATAAAGGAAA
AGCAGGCATTAATGAGCTCAATAAAATGCTGCAGCACATTTTGAATCCTAAAAAACCAAAAGGTCGAGAAATTCCTTTTG
GTGATGTGGTGTACCGGACTGGTGATAAAGTGCTTCAGCTTGTGAATCAGCCAGAGAACAATATTTTTAACGGAGATATT
GGCGAAATTGTCTCGATTTTTTATGCGAAAGAAAACACAGAAAAAGAAGATATGGCTGTGATCTCCTTTGATGGGAATGA
AATCACTTTTACTAAAAAGGATTTTCATCAATTTACACACGCCTATTGTTGCTCTATCCACAAATCACAAGGCAGTGAAT
TCCCTATCGTGGTACTACCAGTCGTGAGAAGTTACTACAGAATGCTTCGGCGAAATTTGCTGTACACAGCCATTACACGA
AGTAAAAAGTTTTTAATCCTGTGCGGCGAGGAATCAGCACTAGAGTGGGGCGTGAAAAACAATGAGGATTCCCTCAGACA
AACGTCCTTAACGATGCGGCTCGTGCAAACCGAAGAGATTATGGATGCGGAGCTTGCAGCACTTCAAAGAGAACTGCCGT
TTAGCGTGCATGATGCAAATATTGGTATGGAGGGAATCACTCCATTTGATTTTATGCATGAATAA

Domains

Predicted by InterproScan.

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (593-659)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (680-728)

• Helix-hairpin-helix containing domain (HHH_RecD2) (157-248)

• AAA domain (AAA_30) (345-553)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	80.151	100	0.804