Detailed information NTG0838215

Bioinformatically predicted

Overview

• Name: uvrA
• Type: Machinery gene
• Locus tag: VF946_RS09660
• Genome accession: NZ_CP141824
• Coordinates: 1904340..1907165 (-)
• Length: 941 a.a.
• NCBI ID: WP_023371429.1
• Uniprot ID: -
• Organism: Streptococcus suis strain HB18
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1899340..1912165

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VF946_RS09635	-	1900686..1901651 (+)	966	WP_002942449.1	LacI family DNA-binding transcriptional regulator	-
VF946_RS09640	nusB	1901730..1902149 (-)	420	WP_023371427.1	transcription antitermination factor NusB	-
VF946_RS09645	-	1902139..1902531 (-)	393	WP_015647326.1	Asp23/Gls24 family envelope stress response protein	-
VF946_RS09650	efp	1902559..1903116 (-)	558	WP_002942436.1	elongation factor P	-
VF946_RS09655	-	1903180..1904241 (-)	1062	WP_074389745.1	M24 family metallopeptidase	-
VF946_RS09660	uvrA	1904340..1907165 (-)	2826	WP_023371429.1	excinuclease ABC subunit UvrA	Machinery gene
VF946_RS09665	-	1907671..1908615 (+)	945	WP_002939248.1	magnesium transporter CorA family protein	-
VF946_RS09670	-	1908631..1909287 (+)	657	WP_002939249.1	DUF1129 domain-containing protein	-
VF946_RS09675	rpsR	1909671..1909910 (-)	240	WP_002939250.1	30S ribosomal protein S18	-
VF946_RS09680	ssbA	1909943..1910437 (-)	495	WP_002942409.1	single-stranded DNA-binding protein	Machinery gene
VF946_RS09685	rpsF	1910449..1910739 (-)	291	WP_002942403.1	30S ribosomal protein S6	-
VF946_RS09690	-	1910911..1911900 (-)	990	WP_023371431.1	lipoate--protein ligase	-

Sequence

Protein

• Length: 941 a.a.
• Molecular weight: 103853.18 Da
• Isoelectric Point: 6.3001

>NTDB_id=838215 VF946_RS09660 WP_023371429.1 1904340..1907165(-) (uvrA) [Streptococcus suis strain HB18]
MQENIVIHGARAHNLKNIDVTIPREKLVVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLGNMDKPDVDSIEGL
SPAISIDQKTTSRNPRSTVGTATEINDYLRLLYARVGVPYCINGHGAISASSVEQIVDEVLELPERQRLQILAPIVRKKK
GQHKTIFEKVQKDGYVRVRVNGDVYDVSEVPELSKSKAHNIEVVVDRIVIKEGIRSRLFDSIEAALRIADGYVIIDTMDE
KELLFSEYYACPVCGFTVPELEPRLFSFNAPFGSCSDCDGLGMKLEVDTDLIVPDASKTLRDGALAPWNPISSNYYPQML
EQAMNHFGIDMDMPFEQLTEVEKNLIFNGSDGKEFHFHYENEFGGVRDIDIPFEGLITNINRRYRETNSDYTRTVMKTYM
NELTCGTCHGYRLNDQALSVKVGGEKGLHIGQLSDLSVADHLQVIENLTLSENEATIATPIVKEIKDRLSFLNNVGLNYL
TLSRAAGTLSGGESQRIRLATQIGSNLSGVLYILDEPSIGLHQRDNDRLIASLKKMRDLGNTLIVVEHDEDTMREADWLI
DIGPGAGVFGGEIVASGTPAQVAKNKKSITGQYLSGKREIPVPLERRVGNGRFLEVTGAKENNLQDVTVRFPLGKFVAVT
GVSGSGKSTLVNSILKKAIAQKLNRNSDKPGKFKSISGIEHLDRLIDIDQSPIGRTPRSNPATYTGVFDDIRDLFAQTNE
AKIRGYKKGRFSFNVKGGRCEACSGDGIIKIEMHFLPDVFVPCEVCRGHRYNSETLEVHYKEKNIAQVLDMTVNDAVEFF
KHIPKIERKLRTIQDVGLGYVTLGQPATTLSGGEAQRMKLASELHKRSTGKSLYILDEPTTGLHTEDIAQLLKVLARFVD
DGNTVLVIEHNLDVIKTADHIIDMGPEGGVGGGTVVATGTPEEVAANPASFTGQYLKMKLK

Nucleotide

• Length: 2826 bp

>NTDB_id=838215 VF946_RS09660 WP_023371429.1 1904340..1907165(-) (uvrA) [Streptococcus suis strain HB18]
ATGCAAGAAAATATTGTGATTCATGGGGCGCGTGCCCATAATTTGAAAAATATTGATGTGACCATTCCGCGTGAGAAGTT
GGTGGTGGTGACTGGTTTGTCGGGGTCTGGTAAGTCGAGTTTGGCTTTTGATACTCTGTATGCCGAAGGCCAACGTCGCT
ATGTGGAATCGTTGTCTGCCTATGCACGTCAGTTTTTGGGCAATATGGACAAGCCTGATGTGGATTCCATAGAGGGACTT
AGCCCTGCTATTTCCATTGACCAAAAAACCACGTCGAGGAACCCGCGTTCGACGGTTGGAACGGCAACAGAAATCAATGA
CTATCTCCGTCTGCTTTATGCTCGGGTTGGGGTTCCTTACTGTATCAACGGCCACGGGGCGATTTCGGCTTCCTCGGTAG
AACAGATTGTCGATGAAGTTTTGGAATTGCCAGAGCGTCAGCGCTTGCAGATTCTAGCTCCGATTGTTCGTAAGAAAAAA
GGGCAACACAAGACCATTTTTGAGAAAGTGCAGAAGGACGGCTATGTTCGGGTCCGTGTCAATGGCGATGTCTATGATGT
GTCTGAAGTGCCTGAGTTGTCCAAGAGCAAGGCTCATAATATTGAAGTCGTTGTCGATCGAATTGTTATAAAAGAAGGTA
TTCGCTCTCGGCTCTTCGATTCCATAGAAGCGGCCCTGCGGATTGCGGACGGCTATGTCATCATCGACACCATGGATGAG
AAGGAACTGCTTTTCTCTGAGTACTATGCCTGCCCAGTTTGTGGTTTTACGGTGCCAGAGTTAGAACCACGTCTTTTCTC
CTTCAATGCGCCTTTTGGGTCTTGTAGTGATTGTGATGGACTTGGCATGAAGCTCGAAGTGGATACCGATTTGATAGTCC
CAGATGCCAGCAAGACCTTGCGTGACGGTGCCTTGGCTCCGTGGAATCCAATCTCATCCAACTACTATCCTCAGATGTTA
GAGCAGGCCATGAATCACTTTGGGATAGATATGGATATGCCATTCGAGCAGCTAACTGAGGTTGAAAAAAATCTGATTTT
CAACGGCTCTGATGGGAAGGAATTCCATTTCCACTATGAAAATGAATTTGGTGGGGTGCGGGATATTGATATTCCATTTG
AAGGCTTGATTACTAATATAAACCGCCGCTACCGTGAAACCAATAGTGATTATACACGGACAGTCATGAAGACTTACATG
AATGAATTGACCTGTGGAACCTGCCACGGCTATCGCCTCAATGACCAAGCCCTGTCTGTCAAAGTCGGAGGCGAAAAGGG
ACTGCATATCGGACAATTATCAGACTTGTCCGTGGCGGATCATTTGCAAGTCATTGAAAATCTGACCTTGTCTGAAAATG
AAGCCACCATTGCAACACCCATTGTCAAGGAAATCAAGGATCGCCTGTCCTTCCTTAATAACGTTGGTCTCAACTATCTG
ACTCTTTCACGAGCAGCAGGTACCCTTTCTGGAGGTGAGAGCCAACGGATTCGTCTGGCGACTCAGATTGGCTCTAACCT
GTCTGGGGTCCTCTATATTCTGGATGAGCCGTCGATTGGTCTGCACCAGCGGGACAATGATCGTCTCATTGCCAGCCTGA
AAAAGATGCGTGATTTGGGCAATACCCTGATTGTTGTTGAGCATGATGAGGACACCATGCGTGAGGCGGACTGGTTGATT
GACATCGGTCCAGGTGCGGGTGTCTTTGGCGGAGAAATCGTGGCTTCTGGAACGCCTGCCCAAGTAGCTAAAAACAAGAA
ATCCATTACAGGCCAGTACCTGTCTGGCAAACGTGAAATTCCAGTTCCTTTGGAACGTCGTGTTGGCAATGGTCGTTTCC
TGGAGGTAACAGGTGCCAAGGAAAATAACCTGCAAGATGTGACTGTTCGTTTCCCGCTCGGAAAATTTGTGGCGGTAACA
GGGGTGTCTGGCTCTGGTAAGTCAACTCTGGTCAACTCCATTTTGAAAAAAGCTATTGCACAGAAACTCAATCGCAATTC
GGACAAGCCAGGTAAGTTCAAGTCCATTTCAGGAATTGAACACTTGGACCGCCTGATTGATATTGACCAAAGCCCGATTG
GACGAACACCGCGTTCCAACCCAGCTACCTACACAGGTGTCTTTGACGATATTCGGGATTTGTTTGCCCAGACCAATGAA
GCCAAAATCCGTGGCTACAAGAAGGGACGTTTCTCCTTTAACGTCAAAGGTGGTCGTTGTGAGGCTTGTTCTGGTGATGG
TATCATCAAGATTGAAATGCACTTCCTGCCAGATGTCTTTGTACCTTGTGAAGTCTGTCGTGGACACCGCTACAATTCTG
AAACCTTGGAAGTACATTACAAGGAGAAAAATATCGCCCAGGTCCTTGATATGACGGTCAATGATGCGGTCGAGTTCTTC
AAACATATTCCGAAAATTGAGCGGAAACTTCGCACCATTCAAGATGTAGGCTTGGGCTATGTTACTCTAGGTCAGCCAGC
AACCACCCTATCAGGTGGGGAAGCCCAGCGGATGAAGTTGGCATCGGAACTTCACAAGCGGTCAACTGGTAAATCCTTGT
ATATCTTGGATGAGCCGACGACAGGTCTGCATACGGAGGACATTGCCCAGTTGCTCAAGGTCTTGGCCCGCTTTGTTGAT
GATGGCAATACCGTGCTGGTCATCGAGCATAATCTGGATGTGATCAAGACAGCAGACCATATTATCGACATGGGACCAGA
AGGCGGTGTCGGCGGTGGTACCGTTGTTGCGACAGGAACGCCAGAAGAAGTAGCAGCTAACCCAGCCAGCTTTACAGGCC
AGTATCTGAAAATGAAGTTGAAATAA

Domains

Predicted by InterProScan.

• UvrA interaction domain (UvrA_inter) (132-238)

• UvrA DNA-binding domain (UvrA_DNA-bind) (288-396)

• ABC transporter (ABC_tran) (624-860)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
uvrA	Streptococcus pneumoniae R6	88.936	99.894	0.888
uvrA	Streptococcus pneumoniae TIGR4	88.936	99.894	0.888
uvrA	Streptococcus pneumoniae D39	88.936	99.894	0.888