Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   QNH48_RS11325 Genome accession   NZ_CP126115
Coordinates   2361241..2363028 (+) Length   595 a.a.
NCBI ID   WP_283955749.1    Uniprot ID   A0AA95NBL1
Organism   Neobacillus sp. YX16     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 2356241..2368028
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QNH48_RS11300 (QNH48_11300) - 2356854..2357897 (+) 1044 WP_283955748.1 ribonucleotide-diphosphate reductase subunit beta -
  QNH48_RS11305 (QNH48_11305) - 2357878..2358351 (+) 474 WP_283954976.1 flavodoxin domain-containing protein -
  QNH48_RS11310 (QNH48_11310) - 2358440..2358757 (-) 318 WP_283954977.1 replicative helicase loader/inhibitor -
  QNH48_RS11315 (QNH48_11315) - 2358937..2359383 (+) 447 WP_283954978.1 MarR family winged helix-turn-helix transcriptional regulator -
  QNH48_RS11320 (QNH48_11320) rcrP 2359458..2361221 (+) 1764 WP_283954979.1 ABC transporter ATP-binding protein Regulator
  QNH48_RS11325 (QNH48_11325) rcrQ 2361241..2363028 (+) 1788 WP_283955749.1 ABC transporter ATP-binding protein Regulator
  QNH48_RS11330 (QNH48_11330) - 2363412..2365418 (-) 2007 WP_283954980.1 alpha-galactosidase -
  QNH48_RS11335 (QNH48_11335) - 2365665..2366582 (-) 918 WP_283954981.1 DMT family transporter -
  QNH48_RS11340 (QNH48_11340) - 2367075..2367485 (+) 411 Protein_2168 ABC transporter permease subunit -

Sequence

Protein


Download         Length: 595 a.a.        Molecular weight: 65710.23 Da        Isoelectric Point: 5.7336

>NTDB_id=836642 QNH48_RS11325 WP_283955749.1 2361241..2363028(+) (rcrQ) [Neobacillus sp. YX16]
MKTSRRSGGSAGKTIDFKKTIKQLISYCKVYLPAIVIALILAMAGAVFSIIGPDLLSEITDLITEGMMTSIDLDAVVKVA
TLLAILYGLGFVFNYIQGFIMATVTQRVSKNLRSDLSTKINRLPLKYFDATSTGDVLSRVTNDVDMIGQTMNQSLSTLVS
AITMFLGTLIMMFYTNWIMAIAAILSTIVGFGLMTFIISKSQKYFAQQQKELGKLNGHIEEIYSGHNVVKVYNGEKEARE
TFHEINTRLYTSAWKSQFMSGLMMPLMMFVGNFGFVVVCIVGAVLAVNNMISFGVIVAFMLYIRLFTQPLTQLAQAATNL
QSTAAASERVFEFLAEEEVANESDKKEKLENAIGDVEFKNVRFGYSEDKMVINNFSATAKAGEKVAIVGPTGAGKTTLVN
LLMRFYEYNGGEILIDGVPINTLTRENIHGLFSMVLQDTWLFEGTIRENIVYSRDGVSDEEVEAACKSVGLHHFIKTLPM
GYDTILDDKANLSAGQKQLITIARAMIDNKPLLILDEATSSVDTRTEVLIQRAMDKLTVGKTSFVIAHRLSTIKNADLIL
VMKDGDIIESGNHEELLSKNGFYAELYNSQFENAS

Nucleotide


Download         Length: 1788 bp        

>NTDB_id=836642 QNH48_RS11325 WP_283955749.1 2361241..2363028(+) (rcrQ) [Neobacillus sp. YX16]
ATGAAAACCTCCCGTAGAAGCGGAGGATCTGCTGGAAAGACCATAGATTTTAAGAAAACGATAAAGCAGCTCATCTCCTA
TTGTAAGGTATATTTACCAGCTATCGTCATTGCATTGATCCTTGCAATGGCAGGTGCTGTTTTCAGTATTATTGGACCAG
ATCTACTTAGTGAGATTACAGATTTGATTACAGAAGGAATGATGACGAGCATTGATCTTGATGCTGTTGTCAAGGTCGCA
ACACTTCTGGCAATCCTTTATGGCTTAGGGTTTGTATTTAACTATATACAAGGGTTCATTATGGCTACAGTCACGCAGCG
TGTTTCAAAGAACTTACGAAGTGATCTTTCAACCAAAATTAACCGTTTACCATTAAAATACTTTGATGCAACAAGTACCG
GAGACGTCCTTAGTCGTGTTACAAACGATGTAGATATGATTGGTCAAACGATGAATCAAAGTTTAAGTACTCTTGTTTCA
GCAATAACTATGTTTCTTGGTACGCTCATCATGATGTTCTACACTAATTGGATCATGGCCATAGCAGCAATTTTGTCTAC
TATAGTTGGGTTTGGTTTAATGACCTTCATTATTTCCAAATCGCAAAAATACTTTGCTCAGCAGCAAAAAGAGCTAGGAA
AATTGAATGGTCATATAGAAGAAATTTATTCAGGCCACAATGTGGTGAAGGTTTATAACGGAGAGAAAGAAGCAAGGGAA
ACCTTCCATGAGATTAACACAAGACTATATACGAGCGCATGGAAATCTCAATTCATGTCAGGGCTTATGATGCCATTAAT
GATGTTTGTTGGTAATTTTGGCTTTGTCGTTGTTTGTATCGTTGGGGCAGTTCTTGCCGTGAATAATATGATTTCATTTG
GTGTGATTGTTGCCTTTATGCTCTATATCCGTCTGTTTACCCAGCCGCTTACCCAGCTTGCTCAGGCAGCTACAAACCTC
CAGTCAACAGCAGCTGCTAGTGAACGTGTTTTTGAATTTCTCGCTGAAGAAGAAGTTGCAAATGAAAGTGATAAAAAAGA
AAAGCTTGAAAATGCAATTGGTGATGTCGAGTTTAAGAATGTACGCTTTGGCTATAGTGAAGATAAAATGGTCATCAATA
ACTTTTCAGCTACAGCTAAGGCAGGGGAAAAAGTGGCGATTGTCGGGCCTACAGGTGCTGGGAAGACAACATTGGTTAAC
CTGCTAATGCGTTTCTATGAATACAACGGTGGTGAAATATTGATTGACGGTGTTCCAATCAATACATTAACTCGGGAAAA
CATTCATGGTCTATTTAGTATGGTGCTACAAGATACCTGGCTTTTCGAAGGAACGATTCGTGAAAATATTGTTTATTCAA
GAGATGGAGTAAGTGATGAAGAGGTAGAGGCTGCCTGCAAATCAGTGGGGCTGCACCACTTTATTAAAACCCTGCCAATG
GGATATGATACGATTCTCGACGATAAAGCAAATCTTTCAGCTGGGCAAAAACAGCTTATTACCATTGCAAGGGCGATGAT
TGATAATAAACCATTACTAATTTTAGATGAGGCGACAAGTTCGGTGGATACTCGAACAGAAGTATTGATTCAACGGGCAA
TGGATAAATTAACTGTCGGAAAAACTTCATTTGTCATTGCTCACCGACTTTCTACTATTAAAAATGCAGACTTAATCCTT
GTGATGAAGGATGGAGACATAATTGAAAGTGGAAATCATGAAGAACTACTTTCGAAAAATGGCTTTTATGCTGAGCTATA
TAATAGTCAGTTTGAAAATGCATCCTAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(373-520)

ABC transporter transmembrane region (ABC_membrane)

(36-310)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

57.491

96.471

0.555