Detailed information    

insolico Bioinformatically predicted

Overview

Name   disA   Type   Machinery gene
Locus tag   U5640_RS19245 Genome accession   NZ_CP141223
Coordinates   4171209..4172333 (+) Length   374 a.a.
NCBI ID   WP_340376994.1    Uniprot ID   -
Organism   Streptomyces sp. SS7     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 4166209..4177333
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  - disA 4171209..4172333 (+) 1125 - - Machinery gene

Sequence

Protein


Download         Length: 374 a.a.        Molecular weight: 40113.80 Da        Isoelectric Point: 5.0092

>NTDB_id=836613 U5640_RS19245 WP_340376994.1 4171209..4172333(+) (disA) [Streptomyces sp. SS7]
MAANDRAAAPGKSGGSSRTESLMRAALSAVAPGTALRDGLERVLRGNTGGLIVLGSDKTVETMSTGGFVLDVEFTATRLR
ELCKLDGGIVVSSDLSKILRAGVQLVPDPTIPTEETGTRHRTADRVSKQVGFPVVSVSQSMRLIALYVDGQRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVAQRLEMVRRIATEIAEYVVELGTDGRLLALQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVDEALSELDALTHAELLELSTVARALGYTGSPEALDSAVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=836613 U5640_RS19245 WP_340376994.1 4171209..4172333(+) (disA) [Streptomyces sp. SS7]
GTGGCAGCCAACGACCGGGCGGCAGCTCCCGGAAAGTCCGGTGGGAGTTCCCGTACCGAGAGCCTCATGCGTGCCGCCCT
GAGCGCGGTGGCACCGGGCACGGCCCTGCGCGACGGGCTCGAGCGGGTGCTCCGCGGCAACACCGGCGGGCTCATCGTGC
TCGGCTCCGACAAGACCGTCGAGACGATGTCCACGGGCGGGTTCGTCCTGGACGTGGAGTTCACCGCCACCCGGCTGCGG
GAGCTGTGCAAGCTCGACGGCGGCATCGTGGTCTCCTCCGACCTGTCGAAGATCCTGCGCGCCGGCGTCCAGCTGGTCCC
GGACCCCACGATCCCCACGGAGGAGACGGGCACCCGGCACCGCACGGCGGACCGCGTCTCCAAGCAGGTCGGCTTCCCGG
TCGTCTCGGTCTCCCAGTCGATGCGGCTGATCGCCCTGTACGTGGACGGCCAGCGCCGCGTGCTGGAGGACTCGGCCGCG
ATCCTGTCCCGCGCCAACCAGGCCCTCGCCACCCTGGAGCGCTACAAGCTCCGGCTGGACGAGGTCGCGGGCACGCTGTC
GGCGCTGGAGATCGAGGACCTGGTGACGGTCCGGGACGTCTCCGCGGTGGCCCAGCGCCTGGAGATGGTGCGCCGCATCG
CCACCGAGATCGCCGAGTACGTGGTCGAACTGGGCACCGACGGCCGTCTGCTGGCGCTCCAGCTGGACGAGCTGATCGCG
GGCGTGGAGCCGGAGCGCGAGCTGGTGGTCCGGGACTACGTCCCCGAGCCCACCGCCAAGCGCTCCCGCACGGTCGACGA
GGCGCTGTCCGAGCTGGACGCCCTCACCCACGCCGAGCTGCTCGAACTGTCCACAGTGGCGCGCGCGTTGGGCTACACCG
GCTCGCCCGAGGCGCTGGACTCGGCGGTATCCCCGCGCGGTTTCCGCCTCCTCGCCAAGGTGCCCCGGCTGCCCGGCGCC
ATCATCGACCGCCTGGTGGAGCACTTCGGCGGCCTGCAGAAGCTCCTCGCCGCCAGCGTCGACGACCTCCAGACGGTCGA
CGGCGTGGGCGAGGCCCGGGCCCGCAGCGTCCGCGAGGGCCTGTCGAGGCTGGCGGAGTCGTCGATCCTGGAGCGCTACG
TCTGA

Domains

Predicted by InterProScan.

Helix-hairpin-helix motif (HHH_2)

(324-359)

DisA bacterial checkpoint controller linker region (DisA-linker)

(155-297)

DisA bacterial checkpoint controller nucleotide-binding (DAC)

(38-151)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.429

96.524

0.438