Detailed information NTG0835906

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: QNH41_RS14535
• Genome accession: NZ_CP126100
• Coordinates: 2799998..2802394 (-)
• Length: 798 a.a.
• NCBI ID: WP_127696706.1
• Uniprot ID: -
• Organism: Bacillus halotolerans strain LN2
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2794998..2807394

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QNH41_RS14500 (QNH41_14500)	-	2796066..2796794 (+)	729	WP_024122304.1	amino acid ABC transporter ATP-binding protein	-
QNH41_RS14505 (QNH41_14505)	-	2796817..2797638 (+)	822	WP_024122305.1	transporter substrate-binding domain-containing protein	-
QNH41_RS14510 (QNH41_14510)	-	2797702..2798352 (+)	651	WP_254517798.1	amino acid ABC transporter permease	-
QNH41_RS14515 (QNH41_14515)	-	2798369..2799025 (+)	657	WP_106020184.1	amino acid ABC transporter permease	-
QNH41_RS14520 (QNH41_14520)	-	2799059..2799190 (-)	132	WP_024122308.1	YrzQ family protein	-
QNH41_RS14525 (QNH41_14525)	-	2799212..2799403 (-)	192	WP_010335110.1	hypothetical protein	-
QNH41_RS14530 (QNH41_14530)	-	2799415..2799939 (-)	525	WP_151174396.1	PRC-barrel domain-containing protein	-
QNH41_RS14535 (QNH41_14535)	recD2	2799998..2802394 (-)	2397	WP_127696706.1	ATP-dependent RecD-like DNA helicase	Machinery gene
QNH41_RS14540 (QNH41_14540)	-	2802419..2803075 (-)	657	WP_116429896.1	tetratricopeptide repeat protein	-
QNH41_RS14545 (QNH41_14545)	mnmA	2803124..2804239 (-)	1116	WP_004398509.1	tRNA 2-thiouridine(34) synthase MnmA	-
QNH41_RS14550 (QNH41_14550)	-	2804268..2805410 (-)	1143	WP_103672584.1	cysteine desulfurase family protein	-
QNH41_RS14555 (QNH41_14555)	cymR	2805430..2805846 (-)	417	WP_003225879.1	cysteine metabolism transcriptional regulator CymR	-
QNH41_RS14560 (QNH41_14560)	-	2806048..2807313 (+)	1266	WP_101861154.1	replication-associated recombination protein A	-

Sequence

Protein

• Length: 798 a.a.
• Molecular weight: 89022.61 Da
• Isoelectric Point: 5.0274

>NTDB_id=835906 QNH41_RS14535 WP_127696706.1 2799998..2802394(-) (recD2) [Bacillus halotolerans strain LN2]
MQQHPDQLKMEEEPFLKGTVNTVIYHNDANLYTVLKVKVRETSEAIEDKVVSVTGYFPALQEEETYTFYGKTVTHPKFGL
QFQAEHFKKEIPTTKEGVIQYLSSDLFEGIGKKTAEEIVKKLGDSAINKILADSSVLYDVPRLSKKKADTLAGALQRHQG
LEQIMISLNQFGFGPQLSMKIYQAYESETLEKIQENPYQLVRDVEGIGFGKADELGGRMGLSGNHPERIKAAILYTLETT
CLSEGHTYIETKQLIIETQTLLNQSAADGQRITEMDAANAMIALGENKDIVIEDERCYFPSLFFAEQNVAKRVKQIASQT
EYDDQFPESEFLLALGELEERMNVQYAPSQKEAIQKALSSPMLLLTGGPGTGKTTVIRGIVELYGELHGASLDPSDYKKD
EAFPIVLAAPTGRAAKRMSESTGLPAVTIHRLLGWNGAEGFTHTEDQPIEGKLLIIDEASMLDIWLANHLFKAIPDHIQI
IIVGDEDQLPSVGPGQVLRDLLASQVIPTVRLTDIYRQAEGSSIVELAHEMKNGLLPNNLTAPTKDRSFIRCGGSQIKEV
VEKVVANALKKGYTAKDIQVLAPMYRGKAGINELNVMLQDILNPPKEKRREIKFGDVVYRTGDKILQLVNQPENNVFNGD
IGEITSIFYAKENTEKEDMAVVSFDGNEMTFTKKDFSQFTHAYCCSIHKSQGSEFPIVVLPVVKGYYRMLRRNLLYTAIT
RAKKFLILCGEEEALEWGVKNNDATVRQTSLKNRLSAQAAEMDAELAALQKELPFSVHDANIGMEGITPFDFMKEEQL

Nucleotide

• Length: 2397 bp

>NTDB_id=835906 QNH41_RS14535 WP_127696706.1 2799998..2802394(-) (recD2) [Bacillus halotolerans strain LN2]
GTGCAGCAGCACCCGGATCAGCTGAAAATGGAGGAGGAGCCCTTTTTAAAAGGGACAGTAAACACCGTCATTTATCACAA
TGACGCCAATTTATATACGGTTCTGAAAGTGAAAGTCAGAGAGACCTCCGAAGCTATTGAAGATAAAGTCGTATCCGTGA
CGGGCTACTTCCCTGCGCTTCAAGAAGAAGAGACCTACACGTTTTACGGAAAAACCGTTACTCACCCAAAGTTCGGACTG
CAATTTCAAGCTGAGCATTTCAAAAAGGAGATCCCGACAACAAAAGAAGGTGTCATTCAGTATTTGTCGAGCGATCTGTT
TGAAGGAATCGGTAAAAAAACCGCTGAAGAGATTGTAAAAAAACTGGGTGACAGTGCGATTAATAAAATTTTGGCTGATT
CTTCAGTCCTTTATGATGTTCCGAGACTGTCAAAAAAGAAAGCTGACACCCTTGCCGGTGCTTTGCAGCGGCATCAGGGA
CTGGAGCAAATTATGATTTCGCTGAATCAATTTGGGTTCGGCCCTCAGCTGTCTATGAAAATCTATCAGGCCTATGAATC
CGAGACGCTTGAGAAAATTCAGGAAAACCCTTATCAGCTTGTGAGAGACGTGGAAGGCATAGGCTTTGGAAAAGCAGATG
AGCTTGGCGGAAGAATGGGGCTCTCAGGGAATCATCCTGAGCGGATAAAAGCGGCTATTTTGTACACGCTTGAAACGACA
TGCCTTTCAGAAGGGCATACGTACATAGAAACGAAGCAGCTGATTATCGAAACCCAAACGCTGTTAAATCAGTCAGCGGC
AGATGGACAGCGCATTACAGAAATGGATGCCGCTAATGCAATGATTGCGCTTGGAGAGAATAAGGATATTGTCATTGAAG
ATGAACGATGTTACTTTCCGTCGCTGTTTTTCGCTGAACAAAATGTTGCAAAGCGTGTGAAACAGATCGCAAGCCAAACC
GAATATGACGACCAGTTTCCTGAATCAGAATTCCTTCTGGCTTTAGGGGAATTGGAAGAGCGTATGAATGTTCAGTACGC
GCCGAGTCAGAAGGAAGCGATACAAAAAGCGCTGTCGTCACCGATGCTTCTTTTAACGGGAGGGCCGGGTACCGGTAAAA
CAACGGTCATCAGAGGCATTGTGGAATTGTATGGAGAACTCCACGGTGCTTCGCTTGATCCGTCGGATTATAAAAAAGAT
GAAGCCTTTCCGATTGTGCTGGCCGCGCCTACAGGTAGAGCGGCGAAACGAATGAGTGAGTCAACGGGTCTTCCGGCGGT
TACGATACATCGGCTGCTCGGCTGGAACGGCGCGGAAGGATTTACTCATACAGAGGACCAGCCGATTGAAGGGAAGCTTT
TGATTATCGATGAAGCGAGTATGCTCGATATATGGCTTGCGAATCATTTGTTCAAAGCGATCCCTGACCATATTCAAATC
ATCATTGTCGGAGACGAAGACCAGCTGCCTTCCGTCGGACCCGGTCAAGTGCTCAGAGACCTTTTGGCATCCCAGGTGAT
TCCGACCGTAAGACTGACAGACATCTATCGGCAAGCGGAAGGATCGTCGATTGTCGAGCTTGCCCACGAGATGAAAAACG
GGCTGCTTCCGAACAACCTGACGGCCCCGACAAAGGATCGTTCCTTTATTCGCTGCGGTGGTTCGCAAATTAAAGAAGTG
GTTGAGAAGGTTGTCGCGAATGCATTGAAAAAAGGATATACGGCAAAAGATATTCAGGTCCTCGCACCGATGTACAGAGG
GAAAGCCGGAATCAATGAGCTGAATGTGATGTTGCAGGATATTTTAAACCCTCCAAAAGAAAAGCGGAGGGAAATTAAGT
TCGGTGACGTTGTCTATAGAACCGGGGATAAAATTTTGCAGCTTGTCAATCAGCCGGAAAACAATGTGTTTAACGGCGAT
ATTGGAGAAATCACTTCCATTTTCTACGCGAAGGAAAATACAGAAAAAGAAGACATGGCTGTTGTCTCTTTTGACGGCAA
TGAAATGACATTTACGAAAAAAGACTTCAGTCAGTTTACTCATGCGTATTGCTGCTCTATTCATAAATCGCAGGGCAGTG
AATTTCCGATCGTGGTTCTTCCAGTAGTGAAGGGCTACTATAGAATGCTCAGAAGAAACCTTCTATATACCGCCATCACG
AGGGCGAAGAAATTTCTCATTTTATGCGGGGAAGAGGAAGCGCTGGAGTGGGGCGTGAAAAATAATGACGCGACTGTCAG
ACAGACCTCATTAAAAAACAGGCTGTCAGCGCAGGCGGCTGAAATGGATGCTGAGCTTGCGGCTTTGCAAAAAGAGCTCC
CGTTCAGCGTGCACGACGCAAATATCGGAATGGAAGGCATTACGCCATTCGATTTTATGAAAGAAGAACAGCTGTAA

Domains

Predicted by InterproScan.

• Helix-hairpin-helix containing domain (HHH_RecD2) (158-248)

• AAA domain (AAA_30) (346-553)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (594-662)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (681-729)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	95.985	99.875	0.959