Detailed information NTG0834768

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: QNH35_RS13165
• Genome accession: NZ_CP126081
• Coordinates: 2545804..2548188 (-)
• Length: 794 a.a.
• NCBI ID: WP_065098513.1
• Uniprot ID: -
• Organism: Bacillus pumilus strain B2_10
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2540804..2553188

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QNH35_RS13130 (QNH35_13130)	-	2541694..2542422 (+)	729	WP_044139592.1	amino acid ABC transporter ATP-binding protein	-
QNH35_RS13135 (QNH35_13135)	-	2542436..2543245 (+)	810	WP_065098510.1	transporter substrate-binding domain-containing protein	-
QNH35_RS13140 (QNH35_13140)	-	2543326..2543979 (+)	654	WP_003216507.1	amino acid ABC transporter permease	-
QNH35_RS13145 (QNH35_13145)	-	2543995..2544645 (+)	651	WP_065098512.1	amino acid ABC transporter permease	-
QNH35_RS13150 (QNH35_13150)	-	2544854..2544985 (-)	132	WP_283923848.1	YrzQ family protein	-
QNH35_RS13155 (QNH35_13155)	-	2545006..2545197 (-)	192	WP_003216308.1	hypothetical protein	-
QNH35_RS13160 (QNH35_13160)	-	2545211..2545669 (-)	459	WP_065098677.1	prc-barrel domain-containing protein	-
QNH35_RS13165 (QNH35_13165)	recD2	2545804..2548188 (-)	2385	WP_065098513.1	ATP-dependent RecD-like DNA helicase	Machinery gene
QNH35_RS13170 (QNH35_13170)	-	2548208..2548861 (-)	654	WP_185107042.1	tetratricopeptide repeat protein	-
QNH35_RS13175 (QNH35_13175)	mnmA	2548922..2550040 (-)	1119	WP_113767481.1	tRNA 2-thiouridine(34) synthase MnmA	-
QNH35_RS13180 (QNH35_13180)	-	2550138..2551280 (-)	1143	WP_113767482.1	cysteine desulfurase family protein	-
QNH35_RS13185 (QNH35_13185)	-	2551299..2551718 (-)	420	WP_044139599.1	Rrf2 family transcriptional regulator	-

Sequence

Protein

• Length: 794 a.a.
• Molecular weight: 89033.57 Da
• Isoelectric Point: 5.2097

>NTDB_id=834768 QNH35_RS13165 WP_065098513.1 2545804..2548188(-) (recD2) [Bacillus pumilus strain B2_10]
MQEHPDQMKLEDEPFLKGTVQAVIFHNESNLYSVLKVKVIETSENLEEKTASVTGYFPALHEEETYTFYGKVTSHPKFGE
QFQATHFQKEVPTTKQGIIHYLSSDLFEGIGKKTAEEIVGQLGTQTLHKIMRDPAVLYDVPRLSKKKADKLAAALQEHQG
LEQIMISLNQYGFGPQLSMKIYQVYESETLQKIEENPYQLVKDVEGIGFIKADELGARTGISGNDPERIRAALLYTVETA
SLQDGHTYIQTKDLIVETRKLLNQTGNEYKVTEMDVANQIIALGEGKEMIIEDERCYHPSLFYAEQSVAKRIQKIVSQTE
YADQFPESEFLLALGELEERLGVQYAPTQKEAIQKALMSPMLLLTGGPGTGKTTVIKGIVELYSDLHGVSLDPSDYKKDE
SFPFVLAAPTGRAAKRMTESTGLPAVTIHRLLGWNGSEGFSHDEEQPIEGKLVIIDESSMLDIWLANHLFKAIPDHIQVI
MVGDEHQLPSVGPGQVLRDLLASQAVPAVTLTDIYRQADGSSIVELAHDMKNGVLPKDITARSKDRSFIKCSVDQMKEVI
EKVVSNAAQKGYSAKDIQVLAPMYKGKAGINELNKMLQHILNPKKPKGREIPFGDVVYRTGDKVLQLVNQPENNIFNGDI
GEIVSIFYAKENTEKEDMAVISFDGNEITFTKKDFHQFTHAYCCSIHKSQGSEFPIVVLPVVRSYYRMLRRNLLYTAITR
SKKFLILCGEESALEWGVKNNEDSLRQTSLTMRLVQTEEVMDAELAALQKELPFSVHDANIGMEGITPFDFMHE

Nucleotide

• Length: 2385 bp

>NTDB_id=834768 QNH35_RS13165 WP_065098513.1 2545804..2548188(-) (recD2) [Bacillus pumilus strain B2_10]
GTGCAGGAACATCCAGATCAAATGAAGCTTGAGGACGAACCGTTTTTAAAAGGGACAGTTCAAGCCGTTATTTTCCATAA
TGAAAGTAATTTATACTCGGTGTTAAAGGTGAAAGTCATTGAAACATCGGAAAACTTAGAGGAAAAAACAGCATCTGTCA
CAGGCTACTTCCCAGCACTTCATGAGGAAGAAACTTACACCTTCTATGGCAAAGTCACAAGCCATCCGAAATTTGGTGAA
CAGTTTCAGGCCACTCATTTTCAAAAGGAAGTACCGACAACAAAGCAAGGAATCATTCATTATCTCTCAAGTGATTTATT
CGAAGGGATAGGGAAAAAGACGGCGGAAGAAATTGTAGGGCAGCTTGGCACCCAGACGCTTCATAAAATTATGCGTGACC
CAGCGGTTTTGTATGACGTTCCGCGCTTATCAAAAAAGAAGGCAGATAAGCTGGCCGCAGCGCTCCAGGAGCATCAAGGA
CTGGAACAAATCATGATCAGCCTGAATCAATACGGCTTTGGTCCGCAGCTCAGCATGAAGATTTATCAAGTGTACGAGAG
TGAGACGCTGCAGAAGATTGAAGAAAACCCGTATCAGCTCGTCAAGGATGTCGAAGGGATCGGATTTATTAAGGCGGATG
AACTTGGCGCTAGAACCGGCATCTCAGGAAATGACCCAGAGCGAATCCGTGCAGCCTTGCTTTATACAGTGGAGACAGCC
AGCCTTCAGGACGGTCATACGTACATACAAACAAAGGATTTGATCGTCGAAACCCGAAAACTGCTCAATCAGACAGGCAA
TGAGTACAAAGTGACGGAAATGGACGTCGCCAATCAGATCATTGCACTTGGCGAAGGGAAAGAGATGATCATTGAAGATG
AGCGCTGCTATCATCCGTCCTTATTTTATGCCGAGCAAAGTGTCGCCAAACGTATACAAAAAATCGTCTCCCAAACGGAA
TATGCAGATCAATTCCCTGAATCAGAATTTCTGCTAGCTCTTGGTGAGCTCGAGGAACGGCTGGGCGTCCAGTATGCACC
GACACAAAAGGAAGCGATTCAAAAGGCGCTCATGTCCCCAATGCTGCTTTTAACAGGCGGACCTGGGACTGGGAAGACAA
CAGTCATTAAAGGGATTGTTGAGCTTTACAGCGATCTTCACGGGGTATCTCTTGATCCGAGTGATTACAAAAAAGATGAA
TCCTTTCCATTTGTGCTTGCGGCGCCAACTGGACGAGCAGCTAAACGGATGACAGAATCAACAGGGCTTCCAGCTGTGAC
GATTCACCGGCTGCTTGGTTGGAACGGGTCAGAGGGATTCTCGCATGATGAAGAACAGCCGATTGAAGGAAAGCTTGTCA
TCATTGATGAATCAAGTATGCTAGATATTTGGCTTGCGAATCATTTGTTTAAAGCCATTCCTGATCATATCCAAGTGATC
ATGGTGGGGGATGAACATCAGCTTCCGTCAGTCGGACCAGGCCAAGTGTTAAGAGACTTGCTTGCATCACAAGCTGTGCC
AGCTGTTACCCTGACAGATATTTACCGTCAGGCAGACGGCTCCAGCATTGTTGAACTTGCACATGATATGAAAAATGGCG
TCCTGCCAAAGGATATTACCGCACGTTCAAAGGATCGATCTTTCATAAAATGCTCAGTTGATCAAATGAAAGAAGTGATT
GAGAAGGTCGTCAGCAATGCTGCTCAAAAAGGCTATTCAGCTAAAGACATTCAAGTGCTTGCGCCTATGTATAAAGGAAA
AGCAGGCATTAATGAGCTCAATAAAATGCTGCAGCACATTTTGAATCCTAAAAAACCAAAGGGCAGAGAAATCCCATTTG
GTGATGTGGTGTACCGGACCGGTGATAAAGTGCTTCAGCTTGTGAATCAGCCGGAGAACAATATTTTTAACGGTGATATT
GGCGAGATTGTCTCGATTTTTTATGCGAAAGAAAACACGGAAAAAGAAGACATGGCTGTGATCTCCTTTGATGGGAATGA
AATCACCTTTACAAAAAAGGATTTTCATCAATTTACACATGCCTATTGCTGTTCGATCCACAAATCACAAGGCAGTGAAT
TCCCCATCGTTGTGCTTCCAGTCGTGAGAAGCTACTATAGAATGCTTCGGCGAAATCTGCTGTACACAGCCATTACACGA
AGTAAAAAGTTTTTAATTCTGTGCGGCGAGGAATCAGCACTGGAGTGGGGCGTGAAAAACAATGAGGATTCGCTCAGACA
AACGTCCTTAACGATGCGGCTCGTGCAAACCGAAGAAGTTATGGATGCGGAGCTTGCAGCACTTCAAAAAGAACTGCCGT
TTAGCGTGCATGATGCAAATATCGGTATGGAGGGAATCACTCCATTTGATTTTATGCATGAATAA

Domains

Predicted by InterproScan.

• Helix-hairpin-helix containing domain (HHH_RecD2) (157-248)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (680-728)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (593-659)

• AAA domain (AAA_30) (345-552)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	80.276	100	0.805