Detailed information NTG0833779

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: U1R71_RS13925
• Genome accession: NZ_CP140123
• Coordinates: 2568592..2569857 (+)
• Length: 421 a.a.
• NCBI ID: WP_014480427.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain SJTU2
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2563592..2574857

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
U1R71_RS13905 (U1R71_13905)	yrrB	2564963..2565583 (-)	621	WP_206697897.1	tetratricopeptide repeat protein	-
U1R71_RS13910 (U1R71_13910)	mnmA	2565669..2566784 (-)	1116	WP_014480424.1	tRNA 2-thiouridine(34) synthase MnmA	-
U1R71_RS13915 (U1R71_13915)	iscSA	2566815..2567954 (-)	1140	WP_014480425.1	cysteine desulfurase family protein	-
U1R71_RS13920 (U1R71_13920)	cymR	2567973..2568389 (-)	417	WP_003225879.1	cysteine metabolism transcriptional regulator CymR	-
U1R71_RS13925 (U1R71_13925)	rarA	2568592..2569857 (+)	1266	WP_014480427.1	replication-associated recombination protein A	Machinery gene
U1R71_RS13930 (U1R71_13930)	tcdA	2569897..2570661 (-)	765	WP_014480428.1	ThiF family adenylyltransferase	-
U1R71_RS13940 (U1R71_13940)	aspS	2570996..2572774 (-)	1779	WP_014480429.1	aspartate--tRNA ligase	-
U1R71_RS13945 (U1R71_13945)	hisS	2572788..2574062 (-)	1275	WP_014480430.1	histidine--tRNA ligase	-
U1R71_RS13950 (U1R71_13950)	yrzK	2574444..2574614 (-)	171	WP_004399157.1	YrzK family protein	-

Sequence

Protein

• Length: 421 a.a.
• Molecular weight: 46463.29 Da
• Isoelectric Point: 7.2043

>NTDB_id=833779 U1R71_RS13925 WP_014480427.1 2568592..2569857(+) (rarA) [Bacillus subtilis strain SJTU2]
MKPLAYRMRPTKIEDIIGQQHLVAEDKIIGRMVQAKHLSSMILYGPPGIGKTSIATAIAGSTSIAFRKLNAVINNKKDME
IVAQEAKMSGQVILILDEVHRLDKGKQDFLLPYLENGMIILIGATTANPYHAINPAIRSRTQIFELEPLTPDLIKQALER
ALHDEHRGLGTYSVSIDDQAMEHFAHGCGGDVRSALNALELAVLSTKESADGEIHITLETAEECLQKKSFSHDKDGDAHY
DVLSAFQKSIRGSDANAALHYLARLIEAGDLESIARRLLVIAYEDIGLASPQAGPRVLNAIQTAERVGFPEARIPLANAV
IELCLSPKSNSAILAIDEALADIRAGKIGDVPKHLKDAHYKGAQELGRGIDYKYPHNYDSGWVEQQYLPDSLKNKQYYKP
KQTGKFESALKQVYDKLMKRK

Nucleotide

• Length: 1266 bp

>NTDB_id=833779 U1R71_RS13925 WP_014480427.1 2568592..2569857(+) (rarA) [Bacillus subtilis strain SJTU2]
ATGAAGCCATTGGCATATCGGATGCGTCCGACAAAAATAGAGGATATTATCGGCCAGCAGCATCTGGTGGCTGAAGATAA
AATTATTGGCAGAATGGTCCAGGCAAAACATTTGTCATCCATGATTTTGTACGGGCCGCCCGGAATTGGAAAAACATCAA
TCGCAACAGCAATCGCCGGTTCAACAAGTATTGCTTTTCGAAAGCTGAATGCTGTCATTAACAATAAAAAAGATATGGAA
ATCGTAGCTCAGGAAGCCAAGATGTCCGGCCAAGTGATTTTGATTCTGGATGAAGTCCACAGGCTGGATAAAGGAAAACA
GGATTTTCTATTACCCTATTTAGAAAACGGGATGATCATTTTGATCGGAGCAACGACGGCTAACCCGTATCATGCCATTA
ATCCGGCGATCAGAAGCCGGACCCAGATTTTTGAGCTTGAACCGTTAACACCTGATCTGATTAAACAGGCACTGGAACGC
GCGCTCCATGATGAGCATCGGGGCCTTGGCACCTATTCTGTATCCATTGATGATCAGGCGATGGAGCATTTTGCCCACGG
ATGCGGAGGAGATGTCCGCTCCGCTTTAAATGCGCTTGAGCTTGCCGTGTTGTCAACGAAGGAGTCAGCAGACGGTGAAA
TTCACATTACATTAGAAACCGCGGAAGAATGCTTGCAGAAAAAAAGCTTTTCTCACGATAAAGATGGTGACGCGCATTAT
GATGTACTGTCCGCTTTTCAAAAATCGATCCGCGGCTCTGATGCCAACGCTGCTCTTCACTATTTGGCTAGATTAATTGA
AGCCGGTGATCTGGAGAGCATCGCAAGACGATTGCTTGTTATCGCCTATGAAGATATCGGTTTAGCAAGCCCGCAAGCCG
GCCCTAGAGTGCTGAACGCTATTCAGACCGCTGAGCGAGTCGGGTTTCCTGAAGCGCGAATCCCGCTGGCCAACGCAGTT
ATTGAGCTTTGCCTCTCACCGAAATCAAACTCTGCCATTCTGGCAATCGATGAGGCCCTGGCAGATATCAGAGCCGGAAA
AATTGGTGATGTCCCGAAGCATTTAAAAGACGCGCATTATAAAGGAGCTCAGGAATTAGGAAGAGGAATCGACTATAAAT
ACCCGCACAATTACGACAGCGGTTGGGTCGAACAACAATACCTCCCTGATTCTCTGAAAAATAAGCAATACTATAAGCCG
AAACAGACAGGAAAATTCGAATCCGCCTTAAAGCAGGTGTATGATAAATTAATGAAAAGAAAATAA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (172-251)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-417)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (8-125)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	99.287	100	0.993