Detailed information NTG0831237

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: OPT60_RS09275
• Genome accession: NZ_CP125359
• Coordinates: 1885861..1886793 (-)
• Length: 310 a.a.
• NCBI ID: WP_003060110.1
• Uniprot ID: A0A9X8T5Q4
• Organism: Streptococcus dysgalactiae subsp. equisimilis strain UT_10236
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1880861..1891793

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OPT60_RS09250 (OPT60_09250)	tsaD	1881351..1882367 (-)	1017	WP_084916686.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	-
OPT60_RS09255 (OPT60_09255)	rimI	1882357..1882782 (-)	426	WP_003056684.1	ribosomal protein S18-alanine N-acetyltransferase	-
OPT60_RS09260 (OPT60_09260)	tsaB	1882784..1883482 (-)	699	WP_065358518.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	-
OPT60_RS09265 (OPT60_09265)	-	1883768..1883998 (+)	231	WP_003056704.1	DNA-dependent RNA polymerase subunit epsilon	-
OPT60_RS09270 (OPT60_09270)	rnjA	1884000..1885682 (+)	1683	WP_003056700.1	ribonuclease J1	-
OPT60_RS09275 (OPT60_09275)	amiF	1885861..1886793 (-)	933	WP_003060110.1	ATP-binding cassette domain-containing protein	Regulator
OPT60_RS09280 (OPT60_09280)	oppD	1886786..1887838 (-)	1053	WP_012767556.1	ABC transporter ATP-binding protein	Regulator
OPT60_RS09285 (OPT60_09285)	-	1887850..1888881 (-)	1032	WP_065957283.1	ABC transporter permease	-
OPT60_RS09290 (OPT60_09290)	-	1888891..1889805 (-)	915	WP_003052794.1	ABC transporter permease	-
OPT60_RS09295 (OPT60_09295)	-	1890073..1891728 (-)	1656	WP_003058031.1	peptide ABC transporter substrate-binding protein	-

Sequence

Protein

• Length: 310 a.a.
• Molecular weight: 35203.02 Da
• Isoelectric Point: 6.6437

>NTDB_id=831237 OPT60_RS09275 WP_003060110.1 1885861..1886793(-) (amiF) [Streptococcus dysgalactiae subsp. equisimilis strain UT_10236]
MNDNRKKLVELKNVSLTFNKGKKNEVKAIDNVSFDIYEGEVFGLVGESGSGKTTVGRAILKLYDINEGEIIFNGETVSHL
KGKDLRTFRKDAQMIFQDPQASLNGRMKIRDIVAEGLDIHGLTASKAEREERVQELLDLVGLNKDHLTRYPHEFSGGQRQ
RIGIARALAVKPKFIIADEPISALDVSIQAQVVNLMQKLQHKRGLTYLFIAHDLSMVKYISDRIGVMHWGKMLEIGTSDD
VYNHPIHPYTKSLLSAIPEPDPDKERQRVADVYDPSQELDGQERQMHEITPGHFVLATQEEADQYRREYH

Nucleotide

• Length: 933 bp

>NTDB_id=831237 OPT60_RS09275 WP_003060110.1 1885861..1886793(-) (amiF) [Streptococcus dysgalactiae subsp. equisimilis strain UT_10236]
ATGAATGATAATCGAAAGAAATTAGTAGAGTTAAAAAATGTCTCCTTAACTTTCAATAAGGGAAAGAAAAACGAAGTCAA
AGCCATTGATAATGTGAGCTTTGATATTTATGAAGGGGAAGTGTTTGGACTGGTTGGGGAATCCGGATCAGGAAAAACAA
CTGTTGGTCGCGCCATTTTAAAGCTTTATGATATTAATGAAGGGGAAATTATTTTTAATGGTGAAACCGTTTCTCATTTG
AAAGGGAAAGACTTGCGGACCTTTCGTAAGGATGCTCAGATGATTTTCCAAGATCCTCAGGCTAGTCTTAACGGCCGTAT
GAAAATCAGAGATATTGTGGCAGAAGGGCTAGATATTCATGGACTCACAGCTTCAAAGGCAGAACGAGAAGAACGCGTGC
AAGAACTCCTTGATTTGGTTGGGTTGAACAAGGACCATTTGACACGTTACCCCCATGAATTTTCTGGTGGTCAACGTCAA
CGGATTGGGATTGCCCGTGCTTTGGCAGTTAAACCTAAATTTATCATTGCTGATGAACCTATCTCAGCTCTCGATGTGTC
GATTCAGGCCCAGGTAGTTAACTTGATGCAAAAGCTTCAGCACAAACGTGGATTGACCTATCTTTTTATTGCCCATGACT
TGTCAATGGTCAAATACATTTCTGACCGTATCGGAGTCATGCACTGGGGTAAAATGTTGGAGATTGGGACCTCAGATGAT
GTCTATAATCATCCTATTCATCCTTATACCAAGAGCCTACTCTCGGCTATTCCTGAACCAGATCCAGACAAAGAACGTCA
GCGGGTGGCTGATGTATATGATCCAAGTCAAGAATTGGACGGCCAAGAACGTCAGATGCATGAGATTACGCCAGGCCATT
TTGTCTTAGCTACCCAAGAAGAAGCAGACCAATATCGACGGGAGTATCATTAA

Domains

Predicted by InterproScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-268)

• ABC transporter (ABC_tran) (30-181)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus thermophilus LMD-9	54.098	98.387	0.532
amiF	Streptococcus thermophilus LMG 18311	53.77	98.387	0.529
amiF	Streptococcus salivarius strain HSISS4	53.443	98.387	0.526