Detailed information NTG0830979

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: QL286_RS06960
• Genome accession: NZ_CP125299
• Coordinates: 1459126..1461396 (+)
• Length: 756 a.a.
• NCBI ID: WP_194219442.1
• Uniprot ID: -
• Organism: Pseudalkalibacillus hwajinpoensis strain MABIK MI00000821
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1454126..1466396

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QL286_RS06935	-	1454922..1455629 (+)	708	WP_283153943.1	YitT family protein	-
QL286_RS06940	-	1455562..1455981 (+)	420	WP_160918687.1	Rrf2 family transcriptional regulator	-
QL286_RS06945	-	1456019..1457161 (+)	1143	WP_283153944.1	cysteine desulfurase family protein	-
QL286_RS06950	mnmA	1457206..1458321 (+)	1116	WP_194219440.1	tRNA 2-thiouridine(34) synthase MnmA	-
QL286_RS06955	-	1458430..1459098 (+)	669	WP_194219441.1	tetratricopeptide repeat protein	-
QL286_RS06960	recD2	1459126..1461396 (+)	2271	WP_194219442.1	ATP-dependent RecD-like DNA helicase	Machinery gene
QL286_RS06965	-	1461574..1461762 (+)	189	WP_194219443.1	hypothetical protein	-
QL286_RS06970	-	1461792..1462847 (+)	1056	WP_242057263.1	AI-2E family transporter	-
QL286_RS06975	alaS	1463223..1465856 (+)	2634	WP_283153945.1	alanine--tRNA ligase	-
QL286_RS06980	-	1465936..1466199 (+)	264	WP_048312684.1	IreB family regulatory phosphoprotein	-

Sequence

Protein

• Length: 756 a.a.
• Molecular weight: 85524.39 Da
• Isoelectric Point: 4.7670

>NTDB_id=830979 QL286_RS06960 WP_194219442.1 1459126..1461396(+) (recD2) [Pseudalkalibacillus hwajinpoensis strain MABIK MI00000821]
MDQPQKGYIKGRPIQMIFFNEDSLYGVARLRISETNEPYDEKEVVVNGMIPRLLEDETYVFYGRFTDHPRYGKQYAVESF
ERQMPESKPGLIQYLSSDLFHGIGEKTAESIVDVLGERAIAKIMRDPSILSKVPKLSEEKAKGLYDSLMEHQGLDQIMIR
LTELGFGPRLSMKIFKAYKQETLEIVEKNPYQLIQDVEGIGFRRADDLGRSIGIEGKHPDRIRAACLHTLNEQTLQEGHV
YLEYDALIQSVNELLGDKLDEADISRELISLYESDKLILDRERIYLHSLYYAEKGLVTGLNNVMSQTEYADSFPESEFYR
ALGDLEERLGIQYAPSQREAVQKAIASPFMILTGGPGTGKTTVIKGIVELYAELNGLSLEPKDYSKDKPFPVLLVAPTGR
AAKRMSEATGLPAFTIHRLLGWKGEAGFEHDENNPIEGRLLIVDEVSMVDVWLANQLFKSLPSQIQVIVVGDEDQLPSVG
PGQVLKDMIDSHAVPVSKLTDIYRQAEGSSIIDLAHSIKEGELPEEFRKPTPDRRFFPCSQAQIIEVVSQVCGNALKKGY
SPRDIQVLAPMYRGSAGVDRLNQELQKLFNPATEQRRELLHGDLVYRVGDKVLQLVNNPEDNVYNGDMGEVVSVFFAKEN
IEKQDQLVVSFDGQEVVYDRPDFNQLTHAYCCSIHKSQGSEFPIVVLPIVRGYYRMLRKNLLYTAVTRSKDYLILCGEEE
AIKLAIQTEDDQVRNTQLTEKLQEMIGEQKTIEESM

Nucleotide

• Length: 2271 bp

>NTDB_id=830979 QL286_RS06960 WP_194219442.1 1459126..1461396(+) (recD2) [Pseudalkalibacillus hwajinpoensis strain MABIK MI00000821]
ATGGATCAGCCACAAAAAGGGTATATCAAAGGAAGACCCATTCAAATGATTTTTTTTAATGAAGATAGTTTGTATGGAGT
GGCAAGACTTCGGATTTCTGAAACGAACGAACCTTATGATGAGAAAGAAGTCGTCGTGAATGGAATGATTCCTCGACTTC
TTGAAGATGAGACGTATGTATTTTACGGACGCTTTACGGATCATCCCCGTTATGGGAAACAGTATGCTGTTGAATCATTT
GAGAGACAGATGCCTGAATCAAAGCCAGGGCTTATCCAATACTTATCTAGTGATTTATTCCATGGAATTGGTGAAAAGAC
AGCTGAATCGATTGTTGATGTGTTAGGTGAGCGCGCCATAGCTAAAATTATGCGTGATCCATCAATATTAAGTAAGGTTC
CAAAGCTATCTGAAGAAAAAGCAAAGGGACTATATGATTCTCTAATGGAGCATCAGGGGCTTGACCAAATTATGATTCGA
TTAACTGAGTTAGGATTTGGACCGAGACTATCGATGAAAATTTTTAAAGCCTATAAGCAAGAAACGCTCGAGATTGTTGA
GAAAAATCCATATCAGCTTATTCAAGATGTGGAAGGTATTGGTTTTCGACGTGCGGATGATTTAGGGAGATCGATTGGTA
TTGAAGGAAAGCATCCTGATCGCATTCGGGCAGCATGTCTTCATACGTTAAATGAACAAACGTTACAGGAGGGACATGTG
TATCTTGAGTACGATGCATTGATTCAATCTGTGAATGAGTTACTAGGTGATAAGCTTGATGAAGCAGATATTTCAAGGGA
ACTGATCTCTCTTTACGAGAGTGATAAATTGATTCTTGATCGAGAGAGAATCTATTTACATTCACTTTACTATGCTGAAA
AAGGTCTTGTGACTGGATTAAATAATGTGATGTCGCAAACGGAGTATGCTGACTCTTTTCCGGAATCTGAATTCTATCGC
GCTCTAGGAGACCTTGAAGAACGACTTGGTATTCAATACGCTCCCTCACAGCGTGAAGCGGTACAAAAAGCAATCGCTTC
TCCGTTTATGATTTTAACTGGCGGACCAGGTACGGGGAAAACCACGGTTATTAAAGGGATTGTGGAGCTCTATGCTGAGT
TAAATGGACTTTCACTCGAACCGAAAGATTACTCAAAGGATAAGCCGTTTCCAGTGCTACTTGTAGCACCAACAGGAAGA
GCAGCGAAACGGATGAGTGAAGCAACAGGACTACCGGCTTTTACGATACATAGATTACTTGGGTGGAAAGGTGAGGCGGG
ATTTGAGCATGATGAGAATAATCCGATTGAAGGCAGGTTGTTAATTGTCGACGAAGTATCCATGGTTGACGTGTGGCTTG
CCAATCAATTATTTAAATCCTTACCATCTCAAATTCAAGTGATTGTTGTTGGTGATGAAGACCAACTTCCTTCGGTAGGG
CCAGGACAGGTGCTCAAGGATATGATCGATTCACATGCAGTTCCCGTTAGTAAACTGACGGACATTTATCGACAAGCTGA
AGGCTCTTCGATTATTGATCTCGCGCACTCTATTAAAGAAGGAGAGCTTCCAGAAGAGTTTCGGAAACCAACGCCTGATC
GGAGGTTCTTTCCTTGTTCCCAAGCACAGATTATAGAGGTTGTCTCGCAAGTGTGTGGCAATGCATTAAAGAAGGGATAC
TCTCCTCGGGATATTCAAGTTCTGGCTCCAATGTATCGAGGATCGGCAGGAGTGGATCGGCTAAATCAGGAGCTTCAAAA
GCTATTTAATCCTGCAACAGAGCAGCGAAGAGAGCTTTTGCATGGAGATCTCGTTTATCGAGTCGGTGATAAAGTTCTTC
AACTTGTAAACAATCCTGAAGACAATGTCTACAATGGTGATATGGGCGAAGTAGTTTCTGTATTCTTTGCGAAAGAAAAT
ATTGAAAAGCAGGATCAGCTTGTTGTTTCATTTGATGGACAAGAAGTAGTTTATGACAGGCCTGACTTTAATCAATTAAC
ACATGCCTACTGCTGCTCCATTCATAAATCCCAGGGTAGTGAGTTTCCGATTGTTGTTCTACCTATTGTAAGAGGGTATT
ATCGGATGCTACGAAAAAATCTTCTTTATACAGCCGTTACAAGGAGTAAGGATTATTTGATTTTATGTGGAGAAGAAGAG
GCCATTAAACTAGCTATCCAAACAGAAGATGATCAGGTTCGAAACACGCAATTAACGGAGAAATTGCAAGAAATGATTGG
GGAACAAAAGACAATTGAAGAGTCGATGTAG

Domains

Predicted by InterproScan.

• AAA domain (AAA_30) (333-527)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (668-716)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (581-651)

• Helix-hairpin-helix containing domain (HHH_RecD2) (150-241)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	58.233	98.81	0.575