Detailed information
Bioinformatically predicted
Overview
| Name | comYH | Type | Machinery gene |
| Locus tag | H7680_RS00765 | Genome accession | NZ_AP023394 |
| Coordinates | 123992..124945 (+) | Length | 317 a.a. |
| NCBI ID | WP_003060701.1 | Uniprot ID | A0A9X8T146 |
| Organism | Streptococcus dysgalactiae subsp. equisimilis strain 159 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 118992..129945
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H7680_RS00725 (SDSE159_00960) | - | 119818..120183 (+) | 366 | WP_003055257.1 | DUF1033 family protein | - |
| H7680_RS00730 (SDSE159_00970) | comGA/cglA | 120264..121205 (+) | 942 | WP_014611930.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| H7680_RS00735 (SDSE159_00980) | comYB | 121141..122172 (+) | 1032 | WP_015057201.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| H7680_RS00740 (SDSE159_00990) | comYC | 122174..122500 (+) | 327 | WP_003055259.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| H7680_RS00745 | comGD | 122475..122903 (+) | 429 | WP_014611932.1 | competence type IV pilus minor pilin ComGD | - |
| H7680_RS00750 (SDSE159_01000) | comGE | 122911..123156 (+) | 246 | WP_003058569.1 | competence type IV pilus minor pilin ComGE | - |
| H7680_RS00755 (SDSE159_01010) | comGF | 123137..123577 (+) | 441 | WP_003061780.1 | competence type IV pilus minor pilin ComGF | - |
| H7680_RS00760 (SDSE159_01020) | comGG | 123600..123929 (+) | 330 | WP_231117501.1 | competence type IV pilus minor pilin ComGG | - |
| H7680_RS00765 (SDSE159_01030) | comYH | 123992..124945 (+) | 954 | WP_003060701.1 | class I SAM-dependent methyltransferase | Machinery gene |
| H7680_RS00770 (SDSE159_01040) | - | 125004..126200 (+) | 1197 | WP_003058485.1 | acetate kinase | - |
| H7680_RS00775 (SDSE159_01050) | - | 126506..126712 (+) | 207 | WP_003058508.1 | helix-turn-helix transcriptional regulator | - |
| H7680_RS00780 (SDSE159_01060) | - | 126815..127495 (+) | 681 | WP_012766451.1 | type II CAAX endopeptidase family protein | - |
| H7680_RS00785 (SDSE159_01070) | - | 127513..127950 (+) | 438 | WP_012766452.1 | hypothetical protein | - |
| H7680_RS00790 (SDSE159_01080) | proC | 128089..128865 (-) | 777 | WP_014611934.1 | pyrroline-5-carboxylate reductase | - |
Sequence
Protein
Download Length: 317 a.a. Molecular weight: 36049.01 Da Isoelectric Point: 4.7910
>NTDB_id=83037 H7680_RS00765 WP_003060701.1 123992..124945(+) (comYH) [Streptococcus dysgalactiae subsp. equisimilis strain 159]
MNFEKIEEAYQLLLENSQLIENDLKTHIYDAIVEQNSFYLGAEGASPQVAQNINKLKALHLTKEEWRRAYQFIFIKAAQT
EQLQANHQFTPDAIGFILLYLLEQLSDKDSLEVLEIGSGTGNLAQTLLNNTSKKLDYVGIELDDLLIDLSASIAEVMDSS
ARFIQEDAVRPQLLKESDVVISDLPVGYYPNDDIAKRYKVASSEEHTYAHHLLMEQSLKYLKKDGFAIFLAPVNLLTSSQ
SQLLKNWLTGYAQVVALITLPDSIFGHPSNAKSIIVLQKQTDHPMETFVYPIRDLKLAENIHDFMQNFKKWKQDNVN
MNFEKIEEAYQLLLENSQLIENDLKTHIYDAIVEQNSFYLGAEGASPQVAQNINKLKALHLTKEEWRRAYQFIFIKAAQT
EQLQANHQFTPDAIGFILLYLLEQLSDKDSLEVLEIGSGTGNLAQTLLNNTSKKLDYVGIELDDLLIDLSASIAEVMDSS
ARFIQEDAVRPQLLKESDVVISDLPVGYYPNDDIAKRYKVASSEEHTYAHHLLMEQSLKYLKKDGFAIFLAPVNLLTSSQ
SQLLKNWLTGYAQVVALITLPDSIFGHPSNAKSIIVLQKQTDHPMETFVYPIRDLKLAENIHDFMQNFKKWKQDNVN
Nucleotide
Download Length: 954 bp
>NTDB_id=83037 H7680_RS00765 WP_003060701.1 123992..124945(+) (comYH) [Streptococcus dysgalactiae subsp. equisimilis strain 159]
ATGAATTTTGAAAAAATTGAAGAAGCCTATCAGTTACTTTTAGAGAATAGTCAACTGATTGAAAATGATCTAAAAACACA
TATTTATGATGCCATCGTTGAGCAAAACTCTTTTTATTTAGGTGCTGAGGGAGCTAGTCCTCAAGTTGCCCAGAACATTA
ACAAACTGAAAGCCTTACACCTGACTAAAGAAGAATGGCGTAGAGCTTACCAGTTTATTTTTATTAAGGCAGCTCAGACT
GAGCAGCTCCAAGCAAACCATCAGTTCACGCCAGATGCTATTGGTTTCATTCTGCTATATCTTTTGGAACAATTGAGTGA
CAAGGATAGCCTAGAAGTCCTTGAAATTGGCAGTGGTACGGGAAATCTAGCACAAACTCTCCTCAATAATACGAGTAAGA
AACTTGATTATGTAGGAATTGAACTTGACGACCTCTTAATTGATTTATCAGCAAGTATTGCTGAAGTAATGGACTCTTCA
GCTCGTTTTATTCAAGAAGATGCGGTAAGACCGCAATTGTTAAAAGAAAGCGATGTTGTTATCAGTGACTTGCCAGTGGG
TTATTATCCTAATGATGACATTGCTAAGCGCTATAAGGTAGCTAGTTCTGAGGAACACACCTATGCTCATCATTTACTTA
TGGAACAATCTTTAAAGTATTTGAAAAAAGATGGTTTTGCCATTTTCTTGGCACCTGTCAATTTGTTGACAAGCTCTCAG
AGCCAATTGTTGAAAAATTGGTTAACTGGCTATGCCCAGGTAGTGGCCTTGATTACTCTACCAGATTCTATATTTGGTCA
TCCCTCTAATGCTAAGTCCATTATTGTCTTGCAAAAGCAGACAGACCATCCGATGGAAACCTTTGTTTATCCTATTCGAG
ACTTGAAACTTGCAGAGAATATTCATGACTTTATGCAAAATTTCAAAAAATGGAAACAGGATAATGTCAATTAA
ATGAATTTTGAAAAAATTGAAGAAGCCTATCAGTTACTTTTAGAGAATAGTCAACTGATTGAAAATGATCTAAAAACACA
TATTTATGATGCCATCGTTGAGCAAAACTCTTTTTATTTAGGTGCTGAGGGAGCTAGTCCTCAAGTTGCCCAGAACATTA
ACAAACTGAAAGCCTTACACCTGACTAAAGAAGAATGGCGTAGAGCTTACCAGTTTATTTTTATTAAGGCAGCTCAGACT
GAGCAGCTCCAAGCAAACCATCAGTTCACGCCAGATGCTATTGGTTTCATTCTGCTATATCTTTTGGAACAATTGAGTGA
CAAGGATAGCCTAGAAGTCCTTGAAATTGGCAGTGGTACGGGAAATCTAGCACAAACTCTCCTCAATAATACGAGTAAGA
AACTTGATTATGTAGGAATTGAACTTGACGACCTCTTAATTGATTTATCAGCAAGTATTGCTGAAGTAATGGACTCTTCA
GCTCGTTTTATTCAAGAAGATGCGGTAAGACCGCAATTGTTAAAAGAAAGCGATGTTGTTATCAGTGACTTGCCAGTGGG
TTATTATCCTAATGATGACATTGCTAAGCGCTATAAGGTAGCTAGTTCTGAGGAACACACCTATGCTCATCATTTACTTA
TGGAACAATCTTTAAAGTATTTGAAAAAAGATGGTTTTGCCATTTTCTTGGCACCTGTCAATTTGTTGACAAGCTCTCAG
AGCCAATTGTTGAAAAATTGGTTAACTGGCTATGCCCAGGTAGTGGCCTTGATTACTCTACCAGATTCTATATTTGGTCA
TCCCTCTAATGCTAAGTCCATTATTGTCTTGCAAAAGCAGACAGACCATCCGATGGAAACCTTTGTTTATCCTATTCGAG
ACTTGAAACTTGCAGAGAATATTCATGACTTTATGCAAAATTTCAAAAAATGGAAACAGGATAATGTCAATTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYH | Streptococcus mutans UA140 |
66.456 |
99.685 |
0.662 |
| comYH | Streptococcus mutans UA159 |
66.139 |
99.685 |
0.659 |