Detailed information NTG0829513

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: SJH97_RS05235
• Genome accession: NZ_CP139175
• Coordinates: 1130232..1131587 (-)
• Length: 451 a.a.
• NCBI ID: WP_320584285.1
• Uniprot ID: -
• Organism: Streptomyces sp. CL7
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1125232..1136587

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SJH97_RS05215 (SJH97_05215)	alaS	1125618..1128290 (-)	2673	WP_320584282.1	alanine--tRNA ligase	-
SJH97_RS05220 (SJH97_05220)	-	1128290..1128658 (-)	369	WP_320584283.1	hypothetical protein	-
SJH97_RS05225 (SJH97_05225)	-	1128666..1129115 (-)	450	WP_320584284.1	DUF948 domain-containing protein	-
SJH97_RS05230 (SJH97_05230)	rpsD	1129316..1129930 (-)	615	WP_019523761.1	30S ribosomal protein S4	-
SJH97_RS05235 (SJH97_05235)	rarA	1130232..1131587 (-)	1356	WP_320584285.1	replication-associated recombination protein A	Machinery gene
SJH97_RS05240 (SJH97_05240)	-	1131631..1132296 (-)	666	WP_320584286.1	vitamin K epoxide reductase family protein	-
SJH97_RS05245 (SJH97_05245)	hisS	1132557..1133819 (-)	1263	WP_320584287.1	histidine--tRNA ligase	-
SJH97_RS05250 (SJH97_05250)	-	1133831..1134541 (-)	711	WP_093768292.1	MBL fold metallo-hydrolase	-
SJH97_RS05255 (SJH97_05255)	-	1134725..1135546 (+)	822	WP_320584288.1	peptidylprolyl isomerase	-

Sequence

Protein

• Length: 451 a.a.
• Molecular weight: 48217.59 Da
• Isoelectric Point: 6.5132

>NTDB_id=829513 SJH97_RS05235 WP_320584285.1 1130232..1131587(-) (rarA) [Streptomyces sp. CL7]
MEPDLFTAAAEERQEKDPAGSPLAVRMRPRTLDEVVGQQHLLKPGSPLRRLVGEGSSGPAGPSSVILWGPPGTGKTTLAY
VVSKATNKRFVELSAITAGVKEVRAVIDGARRASGGYGQETVLFLDEIHRFSKAQQDSLLPAVENRWVTLIAATTENPYF
SVISPLLSRSLLLTLEPLTDDDIRSLLRRALTDERGLKGAVTLPDDTAEHLLRIAGGDARRALTALEAAAGAALDKGESE
VTLATLEETVDRAAVKYDRDGDQHYDVASALIKSIRGSDVDAALHYLARMIEAGEDPRFIARRLMISASEDIGLADPSAL
QIAVAAAQAVAMIGFPEAALTLSHATIALALAPKSNAATTAIGAALEDVRKGLAGPVPSHLRDSHYKGAGKLGHGKGYVY
PHDLPEGIAGQQYAPDALKDREYYEPTRHGAEARYADAVEWTRKHLGRKRS

Nucleotide

• Length: 1356 bp

>NTDB_id=829513 SJH97_RS05235 WP_320584285.1 1130232..1131587(-) (rarA) [Streptomyces sp. CL7]
GTGGAGCCCGACCTGTTCACCGCCGCAGCAGAAGAACGCCAGGAGAAGGACCCCGCCGGCAGCCCGCTGGCGGTCCGGAT
GCGCCCGCGCACCCTCGACGAGGTGGTGGGCCAGCAGCACCTGCTGAAGCCGGGCTCCCCCCTGCGCAGACTGGTCGGCG
AGGGCTCCTCGGGCCCCGCGGGACCCTCCTCGGTGATCCTCTGGGGCCCGCCGGGCACGGGCAAGACGACCCTCGCCTAC
GTGGTCTCCAAGGCCACCAACAAGCGCTTCGTGGAGCTGTCCGCGATCACCGCGGGCGTCAAGGAGGTCCGCGCGGTCAT
CGACGGCGCCCGCCGCGCCTCCGGCGGGTACGGCCAGGAGACGGTCCTCTTCCTCGACGAGATCCACCGCTTCAGCAAGG
CCCAGCAGGACTCCCTGCTCCCCGCCGTGGAGAACCGCTGGGTCACGCTCATCGCCGCGACCACCGAGAACCCCTACTTC
TCGGTCATCTCCCCGCTGCTCTCCCGCTCCTTGCTGCTCACCCTCGAACCGCTCACCGACGACGACATCCGCTCCCTGCT
GCGGCGCGCCCTCACCGACGAGCGCGGTCTCAAGGGCGCCGTCACCCTCCCCGACGACACCGCCGAGCACCTGCTGCGCA
TCGCCGGCGGGGACGCCCGCCGCGCGCTCACCGCCCTGGAGGCCGCCGCCGGCGCCGCGCTGGACAAGGGCGAGTCCGAG
GTGACCCTGGCGACCCTGGAGGAGACGGTCGACCGGGCCGCCGTGAAGTACGACCGCGACGGCGACCAGCACTACGACGT
CGCCAGCGCGCTGATCAAGTCGATCCGCGGCTCCGACGTGGACGCCGCGCTGCACTACCTGGCCCGCATGATCGAGGCCG
GCGAGGACCCCCGCTTCATCGCCCGCCGCCTGATGATCTCCGCCAGCGAGGACATCGGCCTCGCCGACCCGAGCGCCCTG
CAGATCGCGGTCGCCGCCGCCCAGGCCGTCGCCATGATCGGTTTCCCCGAGGCCGCGCTCACCCTCAGCCACGCCACCAT
CGCCCTGGCGCTCGCCCCCAAGTCCAACGCCGCCACCACCGCGATCGGCGCCGCCCTGGAGGACGTCCGCAAGGGACTGG
CAGGACCGGTCCCCTCCCATCTGCGCGACAGCCACTACAAGGGGGCGGGCAAGCTCGGCCACGGCAAGGGCTACGTCTAC
CCGCACGACCTGCCCGAGGGCATCGCCGGGCAGCAGTACGCCCCCGACGCCCTCAAGGACCGCGAGTACTACGAGCCCAC
CCGGCACGGCGCCGAGGCGCGGTACGCGGACGCCGTGGAGTGGACCAGGAAGCACCTCGGTCGCAAGCGGTCCTGA

Domains

Predicted by InterProScan.

• ATPase family associated with various cellular activities (AAA) (AAA) (65-169)

• AAA C-terminal domain (AAA_assoc_2) (199-276)

• MgsA AAA+ ATPase C terminal (MgsA_C) (277-441)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	44.573	96.009	0.428