Detailed information NTG0829249

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: R9806_RS32335
• Genome accession: NZ_CP139044
• Coordinates: 7403202..7404560 (+)
• Length: 452 a.a.
• NCBI ID: WP_223773546.1
• Uniprot ID: -
• Organism: Streptomyces sp. KN37
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 7398202..7409560

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R9806_RS32315 (R9806_32315)	-	7399385..7400209 (-)	825	WP_223773550.1	peptidylprolyl isomerase	-
R9806_RS32320 (R9806_32320)	-	7400411..7401124 (+)	714	WP_223773549.1	MBL fold metallo-hydrolase	-
R9806_RS32325 (R9806_32325)	hisS	7401138..7402400 (+)	1263	WP_320591470.1	histidine--tRNA ligase	-
R9806_RS32330 (R9806_32330)	-	7402514..7403155 (+)	642	WP_320591471.1	vitamin K epoxide reductase family protein	-
R9806_RS32335 (R9806_32335)	rarA	7403202..7404560 (+)	1359	WP_223773546.1	replication-associated recombination protein A	Machinery gene
R9806_RS32340 (R9806_32340)	rpsD	7404916..7405530 (+)	615	WP_055698916.1	30S ribosomal protein S4	-
R9806_RS32345 (R9806_32345)	-	7405518..7407650 (-)	2133	WP_320591472.1	ATP-binding protein	-
R9806_RS32350 (R9806_32350)	-	7407826..7408284 (+)	459	WP_223773544.1	DUF948 domain-containing protein	-
R9806_RS32355 (R9806_32355)	-	7408292..7408648 (+)	357	WP_223773543.1	DUF6167 family protein	-

Sequence

Protein

• Length: 452 a.a.
• Molecular weight: 48197.62 Da
• Isoelectric Point: 6.1041

>NTDB_id=829249 R9806_RS32335 WP_223773546.1 7403202..7404560(+) (rarA) [Streptomyces sp. KN37]
MEPDLFTAAAEDRQEKDPSSSPLAVRMRPRTLDEVVGQQHLLKPGSPLRRLVGEAGGGPAGPSSVLLWGPPGIGKTTLAY
VVSKATNKRFVELSAITAGVKEVRAVIDGARRAMGGHGKETVLFLDEIHRFSKAQQDSLLPAVENRWVTLIAATTENPYF
SIISPLLSRSLLLTLEPLTDDDLRDLLHRAVTDERGLGGAVELPEEAEEHLLRIAGGDARRALTALEAGAGSALAKGEGT
ITLQTLEESVDRAAVKYDRDGDQHYDVASALIKSIRGSDVDAALHYLARMIEAGEDPRFIARRLMISASEDIGLADPNAL
PTAVAAAQAVAMIGFPEAALTLSHATIALALAPKSNAATIAIQQAQADVRGGLAGPVPPHLRDGHYKGAAKLGHAQGYVY
PHDVPGGIAAQQYAPDTIEGKRYYQPTRYGAEARYADVVERVRARLKGEQPE

Nucleotide

• Length: 1359 bp

>NTDB_id=829249 R9806_RS32335 WP_223773546.1 7403202..7404560(+) (rarA) [Streptomyces sp. KN37]
GTGGAGCCCGACCTGTTCACCGCCGCAGCCGAAGACCGCCAGGAGAAGGATCCGTCCAGCAGCCCCCTGGCCGTCCGGAT
GCGCCCCCGTACCCTCGACGAAGTCGTCGGCCAGCAGCATCTGCTGAAGCCGGGCTCGCCCCTGCGCCGCCTGGTGGGCG
AGGCCGGTGGCGGGCCCGCGGGGCCCTCCTCCGTACTCCTCTGGGGCCCGCCCGGCATCGGCAAGACGACGCTGGCATAC
GTCGTATCCAAGGCCACGAACAAGCGCTTCGTGGAGCTCTCGGCGATCACCGCGGGCGTCAAGGAAGTGCGCGCGGTCAT
CGACGGCGCCCGCCGGGCCATGGGCGGCCACGGCAAGGAGACCGTCCTCTTCCTCGACGAGATCCACCGCTTCAGCAAGG
CCCAGCAGGACTCCCTCCTGCCCGCCGTCGAGAACCGCTGGGTGACGCTGATCGCGGCGACCACCGAGAACCCGTACTTC
TCGATCATCTCCCCGCTCCTGTCCCGCTCCTTGCTGCTCACCCTCGAACCGCTCACGGACGACGACCTGCGCGACCTGCT
GCACCGGGCCGTCACCGACGAGCGGGGTCTCGGCGGCGCGGTCGAGCTGCCCGAGGAGGCCGAGGAGCACCTGCTGCGGA
TCGCCGGCGGCGACGCCCGGCGCGCCCTCACCGCCCTGGAGGCGGGTGCGGGCTCGGCCCTCGCCAAGGGCGAGGGGACC
ATCACCCTCCAGACCCTGGAGGAGTCGGTCGACCGGGCCGCGGTAAAGTACGACCGCGACGGCGACCAGCACTACGACGT
GGCGAGCGCCCTCATCAAGTCCATCCGCGGCTCCGACGTCGACGCGGCCCTGCACTATCTGGCCCGCATGATCGAGGCTG
GCGAGGACCCCCGCTTCATCGCCCGGCGCCTGATGATCTCCGCCAGCGAGGACATCGGCCTCGCCGATCCGAACGCCCTG
CCCACCGCGGTCGCCGCCGCCCAGGCCGTCGCCATGATCGGCTTCCCGGAGGCCGCGCTCACCCTCAGCCACGCCACGAT
CGCCCTCGCCCTGGCCCCCAAGTCGAACGCCGCGACGATCGCCATCCAGCAGGCCCAGGCCGACGTCCGCGGCGGCCTCG
CCGGCCCCGTCCCGCCCCACCTGCGCGACGGCCACTACAAGGGCGCCGCCAAGCTGGGGCACGCGCAGGGGTACGTGTAC
CCGCACGACGTCCCCGGCGGCATCGCCGCCCAGCAGTACGCCCCGGACACCATCGAGGGCAAGCGCTACTACCAGCCCAC
GAGATACGGCGCCGAGGCGCGGTACGCCGACGTGGTCGAGCGGGTCCGCGCCCGCCTCAAGGGCGAGCAGCCCGAGTAG

Domains

Predicted by InterProScan.

• MgsA AAA+ ATPase C terminal (MgsA_C) (277-442)

• ATPase family associated with various cellular activities (AAA) (AAA) (65-169)

• AAA C-terminal domain (AAA_assoc_2) (200-276)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	45.921	94.912	0.436