Detailed information NTG0828222

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: QJS65_RS13450
• Genome accession: NZ_CP124831
• Coordinates: 2566507..2568891 (-)
• Length: 794 a.a.
• NCBI ID: WP_282745319.1
• Uniprot ID: -
• Organism: Bacillus altitudinis strain Sample7_7
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2561507..2573891

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QJS65_RS13415 (QJS65_13415)	-	2562609..2563337 (+)	729	WP_007501456.1	amino acid ABC transporter ATP-binding protein	-
QJS65_RS13420 (QJS65_13420)	-	2563352..2564161 (+)	810	WP_282745317.1	transporter substrate-binding domain-containing protein	-
QJS65_RS13425 (QJS65_13425)	-	2564242..2564895 (+)	654	WP_268363284.1	amino acid ABC transporter permease	-
QJS65_RS13430 (QJS65_13430)	-	2564912..2565562 (+)	651	WP_008342693.1	amino acid ABC transporter permease	-
QJS65_RS13435 (QJS65_13435)	-	2565601..2565732 (-)	132	WP_008342695.1	YrzQ family protein	-
QJS65_RS13440 (QJS65_13440)	-	2565753..2565944 (-)	192	WP_003216308.1	hypothetical protein	-
QJS65_RS13445 (QJS65_13445)	-	2565958..2566416 (-)	459	WP_282745318.1	prc-barrel domain-containing protein	-
QJS65_RS13450 (QJS65_13450)	recD2	2566507..2568891 (-)	2385	WP_282745319.1	ATP-dependent RecD-like DNA helicase	Machinery gene
QJS65_RS13455 (QJS65_13455)	-	2568911..2569564 (-)	654	WP_008342707.1	tetratricopeptide repeat protein	-
QJS65_RS13460 (QJS65_13460)	mnmA	2569626..2570744 (-)	1119	WP_041506814.1	tRNA 2-thiouridine(34) synthase MnmA	-
QJS65_RS13465 (QJS65_13465)	-	2570839..2571981 (-)	1143	WP_144679887.1	cysteine desulfurase family protein	-
QJS65_RS13470 (QJS65_13470)	-	2572000..2572419 (-)	420	WP_008342713.1	Rrf2 family transcriptional regulator	-

Sequence

Protein

• Length: 794 a.a.
• Molecular weight: 88935.33 Da
• Isoelectric Point: 5.0580

>NTDB_id=828222 QJS65_RS13450 WP_282745319.1 2566507..2568891(-) (recD2) [Bacillus altitudinis strain Sample7_7]
MQEHPDQMKLEDEPFLKGTVQAVIFHNESNLYSVLKVKVIETSENLEEKTASVTGYFPALHEEETYTFYGKVTSHPKFGE
QFQATHFQKEVPTTKQGIIHYLSSDLFEGIGKKTAEEIVGKLGNQTLHQIMRDPSVLYDVPRLSKKKADKLAAALQEHQG
LEQIMISLNQYGFGPQLSMKIYQVYESETLQKIEENPYQLVKDVEGIGFIKADELGARTGISGNDPDRIRAALLYTVETA
SLQDGHTYIQTKDLIVETRKLLNQTGNDYKVTEMDVANQIIALGEGKDMIIEGERCYHPSLFYAEQSVAKRIQKIVAQTE
YADQFPESEFLLALGELEERLGVQYAPTQKEAIQKALMSPMLLLTGGPGTGKTTVIKGIVELYSDLHGVSLDPGDYKKDE
AFPFVLAAPTGRAAKRMTESTGLPAVTIHRLLGWNGSEGFSHDEDQPIEGKLVIIDESSMLDIWLANHLFKAIPDHIQVI
MVGDEHQLPSVGPGQVLRDLFASQAIPAVTLTDIYRQADGSTIVELAHDMKNGVLPKDITARSKDRSFIQCSSDQMKEVI
EKVVSNAAQKGYSAKDIQVLAPMYKGKAGINELNKMLQQILNPKKPKGREIPFGDVVYRTGDKVLQLVNQPENNIFNGDI
GEIVSIFYAKENTEKEDMAVISFDGNEITFTKKDFHQFTHAYCCSIHKSQGSEFPIVVLPVVRSYYRMLRRNLLYTAITR
SKKFLILCGEESALEWGVKNNEDSLRQTSLTMRLTETEEIMDAELAALQKELPFSVHDANIGMEGITPFDFMQE

Nucleotide

• Length: 2385 bp

>NTDB_id=828222 QJS65_RS13450 WP_282745319.1 2566507..2568891(-) (recD2) [Bacillus altitudinis strain Sample7_7]
GTGCAGGAACATCCAGATCAAATGAAGCTTGAAGATGAACCGTTTTTAAAAGGGACGGTTCAAGCCGTTATTTTCCATAA
CGAAAGTAATTTATACTCGGTGTTAAAAGTAAAAGTCATTGAAACATCAGAGAATTTAGAGGAAAAAACAGCATCTGTCA
CAGGGTACTTCCCAGCGCTTCATGAGGAGGAAACCTACACCTTCTATGGCAAGGTCACAAGTCATCCGAAGTTTGGCGAG
CAGTTTCAAGCCACTCATTTTCAAAAGGAAGTCCCTACAACAAAGCAAGGCATCATTCATTATCTCTCTAGTGACTTGTT
TGAAGGGATTGGAAAAAAGACGGCGGAAGAAATCGTCGGCAAGCTTGGCAATCAGACGCTTCATCAAATTATGCGTGATC
CGTCTGTGTTGTATGACGTCCCTCGCCTGTCAAAAAAGAAGGCAGATAAGCTGGCTGCCGCACTTCAAGAGCATCAAGGA
CTTGAGCAAATCATGATTAGCCTGAATCAATATGGTTTTGGTCCTCAGCTTAGCATGAAGATTTACCAAGTATACGAGAG
TGAAACGTTGCAGAAAATTGAAGAAAACCCTTATCAGCTCGTCAAAGACGTCGAGGGGATTGGCTTTATTAAAGCAGACG
AACTCGGCGCTAGAACAGGGATATCTGGAAATGATCCAGACCGCATTCGTGCAGCTCTTTTGTATACCGTTGAGACAGCA
AGCCTGCAGGACGGTCATACGTACATACAAACGAAAGATCTGATCGTCGAAACCCGTAAACTGCTGAATCAAACCGGCAA
TGACTACAAAGTGACTGAAATGGACGTTGCCAATCAGATCATTGCACTTGGTGAAGGGAAAGACATGATTATTGAAGGTG
AGCGCTGTTATCATCCGTCGCTCTTTTATGCGGAGCAAAGTGTGGCAAAACGCATTCAAAAAATTGTCGCTCAAACGGAA
TATGCAGATCAATTTCCTGAATCAGAATTTCTGCTTGCACTCGGTGAACTGGAGGAACGGCTTGGTGTCCAGTATGCACC
AACCCAAAAAGAAGCCATTCAAAAGGCACTCATGTCTCCAATGCTGCTTTTAACAGGCGGACCGGGTACAGGGAAAACGA
CGGTCATTAAAGGGATTGTCGAGCTTTACAGCGATCTTCACGGCGTATCTCTTGACCCGGGTGATTATAAAAAAGATGAA
GCATTTCCGTTCGTGCTTGCCGCACCAACTGGACGTGCTGCGAAACGAATGACAGAATCCACTGGACTTCCTGCTGTGAC
CATTCACCGGTTGCTAGGCTGGAATGGATCAGAAGGCTTCTCACATGATGAAGACCAGCCGATTGAAGGAAAACTTGTCA
TCATTGATGAATCGAGTATGCTGGATATTTGGCTGGCGAACCATTTGTTTAAGGCGATCCCAGATCATATTCAAGTCATT
ATGGTTGGAGACGAACATCAACTTCCATCTGTCGGACCTGGTCAAGTGTTAAGAGACCTGTTTGCGTCACAAGCTATACC
GGCAGTGACACTAACTGATATTTACCGGCAGGCAGACGGTTCAACAATTGTTGAGCTTGCGCATGATATGAAAAATGGTG
TATTGCCAAAGGATATTACTGCGCGCTCGAAGGATCGATCCTTTATTCAATGCTCTAGTGACCAAATGAAAGAAGTCATC
GAGAAAGTGGTCAGCAATGCTGCGCAAAAGGGTTATTCAGCAAAGGACATTCAAGTGCTTGCCCCGATGTATAAAGGAAA
AGCAGGCATTAATGAACTGAATAAAATGCTCCAGCAAATTTTGAATCCTAAAAAGCCAAAAGGAAGAGAGATTCCATTTG
GTGATGTCGTCTACCGGACAGGCGATAAGGTACTTCAGCTTGTCAATCAGCCCGAGAATAACATTTTTAATGGAGATATT
GGCGAAATTGTCTCGATCTTTTATGCGAAAGAAAACACGGAAAAAGAAGATATGGCGGTCATCTCCTTTGATGGAAACGA
AATCACGTTTACGAAAAAAGATTTTCATCAATTTACACACGCTTATTGTTGCTCGATTCATAAATCTCAGGGCAGTGAAT
TCCCAATCGTGGTGCTGCCAGTCGTGAGAAGTTATTATCGAATGCTTCGAAGAAATTTGCTTTACACGGCCATTACACGA
AGTAAAAAGTTTTTAATTTTGTGCGGCGAGGAATCAGCATTAGAGTGGGGCGTGAAAAATAATGAAGACTCCCTCAGACA
AACGTCTTTAACCATGCGTCTTACTGAAACGGAAGAAATCATGGACGCTGAGCTAGCAGCCCTCCAAAAAGAACTTCCTT
TCAGCGTACACGATGCCAATATTGGCATGGAGGGAATCACCCCGTTTGATTTTATGCAAGAGTAA

Domains

Predicted by InterproScan.

• AAA domain (AAA_30) (345-553)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (593-659)

• Helix-hairpin-helix containing domain (HHH_RecD2) (157-248)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (680-728)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	79.748	100	0.798